Kluyveromyces marxianus: KLMA_50219
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Entry
KLMA_50219 CDS
T05269
Symbol
NAM7
Name
(RefSeq) ATP-dependent helicase NAM7
KO
K14326
regulator of nonsense transcripts 1 [EC:
5.6.2.5
5.6.2.3
]
Organism
kmx
Kluyveromyces marxianus
Pathway
kmx03013
Nucleocytoplasmic transport
kmx03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
kmx00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
KLMA_50219 (NAM7)
03015 mRNA surveillance pathway
KLMA_50219 (NAM7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kmx03019
]
KLMA_50219 (NAM7)
Enzymes [BR:
kmx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
KLMA_50219 (NAM7)
5.6.2.5 RNA 5'-3' helicase
KLMA_50219 (NAM7)
Messenger RNA biogenesis [BR:
kmx03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
KLMA_50219 (NAM7)
mRNA cycle factors
Common to processing body (P body) and stress granule
KLMA_50219 (NAM7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF1_Zn_bind
AAA_12
AAA_11
UPF1_1B_dom
AAA_30
AAA_19
SLFN-g3_helicase
ResIII
UvrD-helicase
NPHP3_N
Viral_helicase1
DEAD
nSTAND3
NAT10_TcmA_helicase
PhoH
AAA_22
AAA_10
AAA_16
Motif
Other DBs
NCBI-GeneID:
34716827
NCBI-ProteinID:
XP_022676685
UniProt:
W0TCX9
LinkDB
All DBs
Position
5:462766..465639
Genome browser
AA seq
957 aa
AA seq
DB search
MKERFSSDSESEASVKDYLSDSDDLVAEDYSEFGDDAGNSGPVAEHACAYCGIDNTSCVV
KCNNCNKWFCNSKNGTNTSHIINHLVLSHHSTVSLHEDSELGDTTLECYNCGRTNVFVLG
FVPAKSEAVVVLLCRLPCAKVKNVNWDTDNWQPLIEERKMLTWVAEEPSEEDQLKARMIT
PSQITKLEARWKSNKDATIMDIDMVEPDEEIPPTLMRYTDAYQYQRSFGPLIQLEADYDK
QLKESQALEHISVTWNLALNNRHLATFALSTFESNELKVAVGDEMILKYSGPQHPEWSGK
GFIIQLPNNFKDEFTLELKPSNKPPPINCTSGFTAVFVWRGTSYKRMQESLRKFAVTKKS
ISGFLYYKILGQEVPDVEFDVALPKNISVPHFTELNQSQVNAVKHVLQRPLSLIQGPPGT
GKTVTSATIVYHLSKIHQQRVLVCAPSNVAVDHLAAKLYSMGLKVVRLTAKSREDVESSV
SELALHNLVNRSAEGKLKKLLNLKEKTGELSAPDTAKFVKLVRKSEAAIIQKADVICCTC
VGAGDKRLDYKFRTVLIDESTQASEPECLIPIVKGAKQIVLVGDHQQLGPVILDRKAGDA
GLKQSLFERLISLGHIPIRLEVQYRMNPHLSEFPSNMFYEGSLQNGVTIEQRTVAKSTFP
WPIHTIPMMFWANYGREEISGNGTSYLNRIEAMNCEKIITRLFKDGVKPEQIGVITPYEG
QRAYVVQYMQMNGSMDKSLYVNVEVASVDAFQGREKDYIILSCVRANERNTIGFLSDPRR
LNVALTRAKYGLIILGNPGALSRNSLWSHLLLHFREKGCLVEGFLDNLQLCTVQLTKPSR
APRKATSENYNYSDYNGAKDVDTQSLMSFGGQNNSGNVFVPSTDLSSLLNQQYWNGQSVD
ITKSTSRKQDNNHYDKNSTNFDGSLANGLQKYDGIGSKYQKVDEEVTIQNIKNLDIN
NT seq
2874 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaaagattcagctcagattctgaaagcgaggcctcagttaaggactatctcagc
gattccgatgacttggtggcagaagattactcggagtttggcgacgatgccggcaattcg
ggaccagttgctgaacatgcatgcgcatactgtggtattgacaatacttcctgtgttgtt
aagtgtaataactgtaacaagtggttttgtaactcgaaaaatgggacgaacacatcgcat
attataaatcacttggttctatctcatcattcgacggtttccctacacgaggactctgag
ttaggggacacgactttggagtgttacaactgtggtaggaccaatgttttcgttcttggg
tttgttcctgcgaagagtgaagccgttgtcgtgctattgtgcagattgccatgcgccaag
gtcaagaatgtgaactgggataccgacaactggcaaccacttattgaggaacggaagatg
ctcacctgggttgcagaagagccaagtgaagaggatcagcttaaggctaggatgattact
ccctctcaaattactaagctagaggcaagatggaaatccaacaaagatgcaaccatcatg
gacatcgacatggtggaaccagacgaagaaattcctccaactttgatgagatacaccgat
gcttaccaataccagagatcgttcggccctctaattcagttggaagccgattacgataaa
cagttgaaggaatcgcaagccttggagcacatctctgtcacttggaatttggccctaaat
aacaggcatttagccacgttcgccttatcaacctttgaatcaaacgaattaaaagttgct
gtcggtgacgaaatgatcttgaagtacagtggaccgcaacaccctgaatggagcgggaaa
ggttttatcattcaattaccaaataactttaaagatgaattcacattggaattgaagccc
agtaacaagcctccaccaattaattgcacgtctggattcacagcagtctttgtatggaga
ggtacttcttacaagagaatgcaagagtcattgagaaaatttgccgttacgaaaaagtcc
atctctggtttcctctactataagattttagggcaagaggttcctgatgtggaattcgat
gttgctttgccaaagaacatctccgtgcctcacttcacagaacttaatcagtctcaagta
aatgctgtgaagcatgtgttacaaaggcctttgtctttaatccaaggtcctccaggtaca
ggtaaaactgtcacatcggcaacaatcgtttaccacttatccaaaattcatcaacaaaga
gtcttagtgtgcgctccatctaatgttgcagtcgatcatcttgctgctaaactctatagt
atgggtctaaaagtagtacgactaacggctaaaagcagggaggatgtcgaaagttctgtt
tctgagttggctttacacaacctcgtcaacagatctgcagaaggcaaattgaagaagtta
ctcaacttaaaggaaaagacaggtgaactatcagccccagataccgcaaaatttgtaaaa
ttggttagaaagtcagaagctgctatcatacagaaggcagatgtcatttgttgtacttgt
gttggtgctggcgataagagattagactataagttccgtacagtccttattgatgaaagt
actcaagcttcagagcctgaatgtttgattcctatcgttaagggagccaaacagatcgtg
ttagtcggtgatcatcagcaattaggacctgttatcttagatagaaaagcgggtgatgcc
ggtttaaaacaatcattattcgaaagactcatttccttgggccatattccaattagattg
gaagttcaatatagaatgaatccacacttgagtgaattccctagtaatatgttctatgag
ggaagtttacaaaacggtgttactattgaacagcggacagttgcaaagtctactttccca
tggcctatccataccatacctatgatgttttgggctaattatggtcgtgaagaaatatca
ggaaacggtacatcttatttgaatagaatcgaagcaatgaattgtgaaaagattataacc
aggttgtttaaggatggtgtcaaaccagaacaaatcggtgtgattactccatatgaagga
cagagggcatacgttgtccaatatatgcaaatgaacggttcaatggataaatcattgtac
gttaatgtcgaagttgcatctgtggacgctttccaaggtagagagaaggattacattatc
ttatcttgtgttcgtgccaatgaaagaaacaccattggtttcttgagtgatcctcgtcgt
ttgaatgttgcattaactcgtgcaaaatatggattgatcattttgggtaatccaggggct
ttatcacgtaatagcttatggagtcatttattacttcatttcagagagaaggggtgttta
gttgaagggtttttggataacctacaactttgtacagtacagttaaccaaaccttcaagg
gctcccagaaaagcaacatcagaaaattataactattccgattacaatggcgccaaagat
gtcgatacccagagcttgatgtcatttggtggtcaaaataactcaggtaatgtatttgtg
ccaagtacagatctttcatcattattaaaccaacaatattggaacggtcaatctgttgat
attacaaaatctacgtctagaaaacaggataacaatcactatgacaaaaattcaactaat
ttcgatggtagtctagcaaatggtttacaaaagtatgacggtattggctctaagtaccaa
aaagtcgatgaagaagttactatccaaaatatcaaaaacttagacattaattga
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