Kluyveromyces marxianus: KLMA_50353
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Entry
KLMA_50353 CDS
T05269
Symbol
NMD2
Name
(RefSeq) nonsense-mediated mRNA decay protein 2
KO
K14327
regulator of nonsense transcripts 2
Organism
kmx
Kluyveromyces marxianus
Pathway
kmx03013
Nucleocytoplasmic transport
kmx03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
kmx00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
KLMA_50353 (NMD2)
03015 mRNA surveillance pathway
KLMA_50353 (NMD2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kmx03019
]
KLMA_50353 (NMD2)
Messenger RNA biogenesis [BR:
kmx03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
KLMA_50353 (NMD2)
mRNA cycle factors
P-body specific factors
KLMA_50353 (NMD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G
Upf2
Glutaredoxin2_C
Motif
Other DBs
NCBI-GeneID:
34716959
NCBI-ProteinID:
XP_022676817
UniProt:
W0TBJ1
LinkDB
All DBs
Position
5:complement(758730..761918)
Genome browser
AA seq
1062 aa
AA seq
DB search
MNNEWRLELNKLNSAAWSGIDVFPNKASKLDSSIKRNTGFIKKLKQGITKDSKGSLITDI
AEVSLEKYLSEIISTTNESLLKNSGKTDDIIAAVEVISGLHQRFNSEFTIPLIECFLFVF
ESSTEEIDSEKDRIARVNVLKNSVRILIELQLTGILPNVEDLNKSKLPSFIANRYAKKEP
ILFVVLREVLNYKFKEAFTTPVATLIAKRYPQLLSDGETEFDSLIVNLNLKTLLRSLFKI
YTDIVFQQVVDSNKKAVKLMKEHQKAQIRTGKESSEYLDSYNEVNPIFERFSAAAVGLAE
VFDLTPPEIIDIEEVVQEQQPSVILNEGKEGQQKIWENEETRRFYESLADLSEVHSQFNP
DTVPNPEDVNAFFTSLETIETAEQVDEISRNYWAQNLDNRATRKRLMRFFIECKDWSKIA
LYARFIANNAEYLEEVKNELVNHFDTGLKFQIHNEKMNVKNIIFFAELVKFMLVPGFMIF
HKIRSLAVHITVPNNIEILTALFENLGKFLINKPEFRPQMEKMMALIQEKKKDHLLTISN
KAALDNLIILIYPPKLNALNQEKLELTPEQHFYKILIRRELGNVSLNTAYKLILKASWKD
EKIQKTLFSVFSKPEKVSYQSLPKLANMLTYLFKYYKPFTVRVVDTLLDKIYVGLESGGY
NLNMARVAQVKYLTELYNTSFIKFDVLLDTMYKILRFGYPGGQPNPFFINEGDLPDNYFR
ISLISTILLGMERKSETATKKLNIFIQFFEYYILCKDQPLPKEVSFKTDNVFALFPDFKR
SINWQSSYENLIALLKELGINSTKSMEGNDNEGEDEEEEEEDDEDEEGTSEPAGILDEIE
QENQLAEDIDALSLSDGSSSDFSSDSDNISADEVDEGEGEEEEEEDDDEDEDEDEDEDED
EDEDEDEDEDDEDDEDEEEDEDDDDDDDDFLIDREKERKRIMEEFEKKLQDDNELKAQAA
LDKQFQQMMDESLGSIKNETVPTVSIPKHFSIQVSNTSPATNKPKGGKIPFTFLSRSGKK
TQAHAINVPSDTKFATEILEEEQRLIEERQKIKSIVMNRNFD
NT seq
3189 nt
NT seq
+upstream
nt +downstream
nt
atgaataatgagtggagattggagttgaataagctcaatagtgctgcatggtcaggcatt
gatgtctttcctaataaggcatcgaaacttgattctagcattaaaaggaacacagggttc
ataaaaaagctaaaacagggtataacaaaggactctaaaggtagtttaattactgatatc
gcggaagtctcattggagaagtatctctcggagattattagtacgacaaacgaatcgttg
ctaaaaaattccggtaagactgatgatattatagcagcagttgaagtaattagtggtcta
catcagcggttcaacagcgaatttaccatcccattgatagagtgttttctctttgtattt
gaaagttccacagaagaaattgattcagaaaaggatagaattgccagagttaatgttttg
aagaacagtgttcggattttgattgaattgcaactaactggtattcttccaaacgtagaa
gacctcaataaatccaaattaccttccttcattgcgaatcgctatgctaaaaaggagcca
atcctttttgtagtgctaagagaggtactaaactacaaattcaaagaggctttcaccaca
ccagtagctactctaattgccaaaaggtacccgcagttactttcagatggcgaaacggaa
tttgatagtttgattgtaaatcttaacttgaagacacttttgaggtccttattcaaaata
tacacagatattgtgttccaacaagttgttgattccaataaaaaagccgtaaagttgatg
aaagagcatcaaaaagctcaaattagaaccggtaaagaatcaagtgagtacctagactca
tataatgaggtaaatccgatatttgagcggttttctgcagctgcagttggcttggcagaa
gtttttgacctgaccccaccagaaataatagacattgaagaggtagtacaggagcaacaa
ccttctgttattcttaatgaaggtaaagaaggtcaacagaaaatatgggaaaatgaagaa
accaggagattttatgagagtttagctgacttatctgaagtacattcgcaattcaatcca
gatacggtaccgaacccagaagatgtaaacgcgttcttcacttctttagagacaattgaa
accgctgagcaggtcgatgagattagtcgcaactattgggctcagaaccttgataacaga
gcaacaaggaagagactcatgcgattcttcattgaatgcaaagattggagtaaaattgcg
ttatacgcaaggttcattgcaaacaatgcagagtatttggaagaagtaaaaaatgaattg
gttaatcactttgatacaggtctcaagtttcaaattcacaatgagaaaatgaatgtgaag
aacatcattttctttgcagagttggtgaaattcatgctagtaccgggctttatgatattc
cacaagattagatcattggctgttcatatcactgttcccaataatatagaaatcttaact
gctctatttgaaaatttggggaaattcttaatcaataagccagagttccgtcctcaaatg
gaaaagatgatggcactaattcaggagaaaaagaaggatcatttattaacaataagcaac
aaagcagccttggataatttgattattttaatatacccaccaaaattgaatgcgctaaat
caggaaaaactagaacttacaccagaacagcatttctataaaattttgatacgccgtgaa
cttggtaatgtttcactaaacacagcgtataaacttatattaaaagcatcatggaaggat
gaaaaaattcaaaagactctattctcagtcttttcgaagccagaaaaggttagttaccag
tctttaccgaaactagcaaatatgcttacctatttgttcaaatattacaaaccatttacc
gttcgggtggtcgacactttactagataaaatttacgttggacttgaatctggaggatat
aacttgaatatggcaagagtggcacaggtcaagtacctaacagaactttacaatacttct
tttattaagtttgatgtccttttggataccatgtacaaaattcttcgtttcggatatcca
ggtggacaaccaaatccattcttcattaatgagggtgatctaccagataactatttcaga
atatctttgatatcaacgattctgttgggaatggagagaaagtctgagactgctaccaag
aaattgaacatcttcatacaattttttgaatactatattctctgtaaagatcaacctttg
cctaaagaagtatctttcaaaacagataatgtatttgcattattcccagattttaagagg
tccatcaattggcaaagttcttacgaaaacctcattgctctgctgaaagaactcggaatc
aattctacaaagtctatggaaggaaatgataatgagggagaagacgaagaagaagaggaa
gaggacgatgaagacgaagaaggaaccagtgaaccagcgggtatcttggatgaaatcgag
caagaaaatcaattggcggaagatatcgatgccttatctctttctgatggctcttcaagt
gacttcagttccgattcggacaatatctcagcagatgaggtagatgaaggagaaggggaa
gaagaggaagaagaagatgatgacgaagacgaagacgaggatgaagacgaggatgaagac
gaggatgaagatgaagatgaagacgaagatgacgaagacgatgaggatgaggaggaggat
gaagacgatgacgacgacgacgacgatttcttaatcgacagagaaaaggaaaggaaaaga
ataatggaagaattcgagaaaaaattgcaggacgacaatgaactaaaggcccaagctgct
ttagataaacagtttcaacaaatgatggatgaatctcttggaagcataaaaaacgaaact
gttccaacagtcagcatcccaaaacacttttcaattcaagtatcaaatacctcgcctgcc
acgaacaaacctaaaggtggtaagattcctttcactttcttgagtagatcagggaagaag
acacaagcgcatgcgattaatgttccatctgacacgaaatttgcaaccgagattctggaa
gaggagcaacgtttgatcgaggagcgtcaaaagatcaagagcattgtcatgaatcgtaat
tttgattaa
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integrated database retrieval system
