Kluyveromyces marxianus: KLMA_50577
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Entry
KLMA_50577 CDS
T05269
Symbol
REF2
Name
(RefSeq) RNA end formation protein 2
KO
K15543
RNA end formation protein 2
Organism
kmx
Kluyveromyces marxianus
Pathway
kmx03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
kmx00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
KLMA_50577 (REF2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kmx03019
]
KLMA_50577 (REF2)
Messenger RNA biogenesis [BR:
kmx03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
KLMA_50577 (REF2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TetR_C_27
FANCI_S2
Motif
Other DBs
NCBI-GeneID:
34717169
NCBI-ProteinID:
XP_022677027
UniProt:
W0TEJ3
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All DBs
Position
5:1232759..1234177
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AA seq
472 aa
AA seq
DB search
MLATSTMNNLIPQKVNITHALQSSVIEKMKLDIKQFQSMPELKQDQMEVVDNYIDSLDSA
FTQFCMDNDHVEKRKDGVTDADVELYEGLKRMYLSYMSQLAEIKKERIQKDQEVSKDKPL
EYIQQELPYLQPSDRSAFIKELLEKPSLSLTKADDLLKAVQNLAIIDGTLKDNLKLYHDL
LLKVGYEEFQINDILPHVENNSEAIIPPEKNLIQENLIQDFDTNEDKKKISFSKYLKKDG
KDGRDSKDINGSLKRSLTPEPTEEHHIEKKVKKDSTNTSGLVSILKNENKKRNRIFTGIR
FVDDSKLVTIFGDGLPNDGLIASPKQLKKILKPFKDGEPAEFILEGWNGHGARPLIIEIK
GVKNSDISEIKNGPVKLSTQAPSSLMKNFTSFSPDLNKPALEPVHIEEEEDSSKSKKKQR
APIVARAFGKNSLLLRKDRGGLPYKRVPEVNPNTYPIRPNTSENDDTYELFE
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgttagcaacctcaacgatgaataatctaataccacagaaggtaaatataacacatgcg
ttacaatccagcgtaatagagaagatgaagttggacattaagcaattccaaagcatgcct
gagctgaaacaagatcagatggaagtagtggataattatatagattccttagattcagct
ttcactcaattttgtatggataacgatcatgtggagaaacgtaaagatggtgtgactgat
gctgatgtagagctgtatgaaggtttaaaacggatgtatttaagttacatgagccagctt
gcagagatcaaaaaggaaaggatacaaaaagaccaagaagtcagcaaagataagccattg
gaatatatacaacaagaactaccatacttacagccttcagacagatctgcttttatcaaa
gaattattagaaaaaccttcgttgtcacttactaaagcagatgatttgttaaaagcagtg
caaaacctagctatcatagatgggacattgaaagataacttaaaattataccatgatctt
cttctgaaggtaggctacgaagaatttcaaattaatgatatacttccgcatgttgaaaat
aattcagaagcaataatacctccagaaaagaatctaatacaagaaaacttaattcaagat
tttgacaccaatgaagacaaaaagaaaatctctttctctaaatatttgaagaaagatggc
aaagatggcagagattcgaaagatattaatggctcactaaagcggtctcttacgcctgag
ccaacggaagaacatcatatagaaaaaaaagttaaaaaggatagtacaaacaccagcgga
ttggtatcaattctcaagaatgaaaataaaaagagaaatagaattttcacgggcatcaga
tttgtagatgattcaaaattagtcacaatttttggagatggtcttcccaacgacggactg
attgcttctccaaaacagctgaaaaaaattctaaagccatttaaggatggtgaacctgca
gaattcattttagaagggtggaatggtcatggtgcgcgtccactcattattgaaattaaa
ggagttaaaaattcagatatcagcgaaattaaaaacggacctgtcaaactttcgacccaa
gctccctcttccctaatgaagaacttcacatcttttagtcctgatttaaacaaacctgca
ttggaacctgtccatatcgaagaagaagaagattcatccaaatccaaaaagaaacagaga
gcccctattgtggctcgtgcatttggcaagaattccttactactaaggaaagatcgggga
ggattgccatacaagagagtccctgaagttaatccaaatacatatccaataaggccgaat
acgtcagaaaacgatgatacgtatgagcttttcgaatga
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