KEGG   Kluyveromyces marxianus: KLMA_60149
Entry
KLMA_60149        CDS       T05269                                 
Symbol
SWD2
Name
(RefSeq) COMPASS component SWD2
  KO
K14962  COMPASS component SWD2
Organism
kmx  Kluyveromyces marxianus
Pathway
kmx03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:kmx00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    KLMA_60149 (SWD2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:kmx03019]
    KLMA_60149 (SWD2)
   03036 Chromosome and associated proteins [BR:kmx03036]
    KLMA_60149 (SWD2)
Messenger RNA biogenesis [BR:kmx03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     KLMA_60149 (SWD2)
Chromosome and associated proteins [BR:kmx03036]
 Eukaryotic type
  Histone modification proteins
   HMT complexes
    COMPASS/SET1 complex
     KLMA_60149 (SWD2)
    COMPASS/SET1 complex (yeast)
     KLMA_60149 (SWD2)
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_WDR5 WD40_Prp19 WD40_WDHD1_1st Beta-prop_IFT122_1st WD40 Beta-prop_WDR3_1st WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_WDR36-Utp21_2nd Beta-prop_CAF1B_HIR1 Beta-prop_WDR90_POC16_2nd WDR55 Beta-prop_WDR3_2nd Beta-prop_Aladin WD40_Gbeta ANAPC4_WD40 EIF3I Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_TEP1_C Beta-prop_RIG_2nd Beta-prop_SPT8 Beta-prop_EIPR1 Beta-prop_WDR75_1st Lactonase DSE1_N WDR90_beta-prop_4th
Other DBs
NCBI-GeneID: 34717376
NCBI-ProteinID: XP_022677233
UniProt: W0TDL9
LinkDB
Position
6:336918..337994
AA seq 358 aa
MFDGNNDIRKESRRKDIKAHLSGSVGIIELTKMTVNINKNNLLRFEAVKSFRVSDKELAP
ITSVCFDDHGQYLLTASANDNMHLYDAVSCRFLNTIASKKYGCHSAKFTHAQSECIYSST
MKSFDIRHLNLETNTYLRYFQGHGALVSDIQMSPIDDTFLSASYDESVRLWDLRSSKAQA
LIPSLVPTCIAYDPSGLVFAIGNPENHEVGLYNVRHLKAGPFLVIKVDPNFHQWNKLEFS
NDGKYILLASSAGKHLIMDAFDGSQLFELAGTKPFPLREFMDSGSATFTPDGRFTLGTDY
SGKIAVWNHAEVVSGRTLKPQGFINAPPNACPRTIAFNPKYSMFVTADETVEFYVYNE
NT seq 1077 nt   +upstreamnt  +downstreamnt
atgtttgatggtaacaatgacataagaaaagagtcgagaagaaaggatataaaagcacac
ttgagcgggtcagtgggtattatagagttgacaaaaatgactgttaacattaacaagaat
aatttgcttcgatttgaagccgttaaatcgtttagagtgtcggataaagagcttgcgcct
atcacttcggtttgtttcgatgaccatggacaatatttattgacagcaagcgcgaacgat
aatatgcatctatacgatgcggtaagctgtcggtttttgaatactatagcatcaaagaag
tatgggtgtcattctgccaagttcacgcatgctcagtctgagtgtatatattcatcgacg
atgaaatcttttgatattcgtcatttaaacctcgaaacgaacacttatctcaggtatttc
cagggccacggggctcttgtaagtgacattcagatgtctcctattgacgatacttttctt
tctgcttcatacgatgagtctgttcggttgtgggacttgagatcatccaaggcacaagca
cttataccaagtttagttccaacatgtattgcatacgatccaagtgggcttgtgtttgcg
attgggaatcctgaaaaccacgaggttgggttatacaatgtaagacatttgaaggctggc
ccatttttagtgataaaggtggatcccaacttccaccagtggaacaagcttgaattttcg
aatgacggtaagtatattttgctggcttcttcagctggaaagcacttgataatggatgca
ttcgatgggtcacagctctttgagttggctggcaccaagcctttcccattaagagaattt
atggattccggctcagcaacattcactccagatggacgattcacacttggtaccgattac
agcggtaaaattgctgtgtggaaccatgccgaagttgtgagcggaagaactctaaaacca
caagggttcataaatgctccaccaaacgcgtgtccaagaactattgcattcaatcctaaa
tacagtatgtttgtcactgccgatgagactgtagaattctacgtatataatgaataa

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