Kluyveromyces marxianus: KLMA_60157
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Entry
KLMA_60157 CDS
T05269
Symbol
PRP40
Name
(RefSeq) pre-mRNA-processing protein PRP40
KO
K12821
pre-mRNA-processing factor 40
Organism
kmx
Kluyveromyces marxianus
Pathway
kmx03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
kmx00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
KLMA_60157 (PRP40)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
kmx03041
]
KLMA_60157 (PRP40)
Spliceosome [BR:
kmx03041
]
Complex A
U1 snRNP components
U1 related factors
KLMA_60157 (PRP40)
Complex B
KLMA_60157 (PRP40)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
RhoGAP-FF1
PQQ_2
Glyco_hyd_101C
DUF7028
Motif
Other DBs
NCBI-GeneID:
34717384
NCBI-ProteinID:
XP_022677241
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All DBs
Position
6:356799..358511
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AA seq
570 aa
AA seq
DB search
MGWKEAKDPQGRVYYYNDEGQTTWEKPEELFTAFEKRLLSHGWKSALTEDGKVYYYKPST
GETTWEAPIKDEVVAEEEQKQQQQQQQQQQQEQEQKDTQDSGEVASHEFTGTLDDGDGKY
SNNSKLLVARKASSKEEAEKAFLQMLADYQVDSTWSFDRIISEIGSKDARYWMVDDDPLW
KQAMFDKFLSNRSESELINEHKHLERFEQAFVEMLSKLPTIHYYSRWPTIKRQIMNEPIY
KHSVVAEKQKRRTFLRYIAQLQQEHQEQNNKVRNEALKELTQYFVSISDDIEPVNVPWSK
FATKYLWGSPRFDSNKNFKSLTKGDVFQKYTTFVEEKMTDLKARIEEHRRLNYRSDRKAR
DAFKELLNELSPPIKYNTTWKDVYPLVKDDPRFTAMLGRNGSSALDLFLDKVEESELVMR
AKSSVANQVLISNNLDLETSSMEDISTALKQSVHLNDLSSEDITSLINRLKESHYRKKQE
ARRRELEPQLATREAKIFEDKLINIFSTKDLTLGPTSSWDDVLNQIKDDPSYQVLSPDLG
KLIFENLANKGITSRKRHLEAPKSITDLDY
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atgggttggaaagaagcaaaggaccctcagggacgggtttattattacaacgatgaggga
cagactacatgggaaaagcccgaagagttgttcactgcgtttgagaagcgattgttgagc
catgggtggaaatcagccttgactgaggatgggaaagtatactactataagccctctact
ggggaaacgacttgggaggctccaatcaaggacgaagttgtggcagaagaggaacagaag
cagcagcagcagcagcagcagcagcagcagcaggaacaggaacaaaaagacacacaagat
agcggcgaggttgcgagccacgagtttaccgggactttggacgatggtgatggcaagtac
agcaataactcaaagcttttagtagcgcgaaaagccagctcgaaggaagaagcggaaaag
gcttttctccaaatgctagctgattatcaggtagattctacatggtccttcgacaggatc
attagcgagatcgggagcaaagacgccaggtactggatggtagacgatgacccgctctgg
aaacaagctatgtttgataaatttctatctaatagatcggaatcggaattgatcaacgaa
cataaacacttggagagattcgagcaagcttttgtggaaatgttatcaaaactaccgacg
attcattattattcacgctggcccacaataaaaagacaaatcatgaacgaaccgatctac
aagcactctgttgtcgcggagaagcaaaaaagacgtacctttttgagatacattgctcag
ctgcagcaggagcatcaggaacaaaataacaaggtgaggaacgaagcattgaaggaattg
acgcagtatttcgttagcatttcggatgatatcgagcctgtcaatgtaccctggagcaaa
tttgctacaaaatatttgtggggatccccaagattcgactccaataagaatttcaaatcg
ttgaccaagggcgatgtattccaaaagtacacaacatttgtggaagaaaagatgacagac
ttaaaagcacgcatagaagaacaccgccgcctgaattatagatcagacaggaaggctaga
gatgcgttcaaagaactacttaacgaactatccccacctatcaaatacaacaccacatgg
aaggatgtatatccacttgtaaaagatgaccccagatttacagcaatgcttgggcgtaac
gggtcctcggcgttggacttattcctagacaaggtggaagaatccgaattggtcatgaga
gctaaaagctccgtggctaaccaagtcttgatttcgaataacctagatttggaaactagc
agcatggaagatatatccactgcactaaagcaaagcgttcacctcaatgatctcagctca
gaggacatcacaagtttgataaacagattgaaagaatcccactacaggaagaagcaagaa
gcacggcgtagagaattagaaccccaactagctactcgagaggccaaaatatttgaagac
aagctcataaatattttctcaaccaaggacctgacactcggccctacatcttcctgggac
gatgtcctaaaccaaataaaggatgacccatcgtatcaagttttgtccccagacctaggg
aaactaatattcgagaatctcgccaacaaagggatcacctctaggaaaaggcatttggaa
gctccaaaatctatcacagatctcgattattga
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