Kluyveromyces marxianus: KLMA_60512
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Entry
KLMA_60512 CDS
T05269
Symbol
RPB1
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB1
KO
K03006
DNA-directed RNA polymerase II subunit RPB1 [EC:
2.7.7.6
]
Organism
kmx
Kluyveromyces marxianus
Pathway
kmx03020
RNA polymerase
kmx03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
kmx00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
KLMA_60512 (RPB1)
09124 Replication and repair
03420 Nucleotide excision repair
KLMA_60512 (RPB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
kmx03021
]
KLMA_60512 (RPB1)
03400 DNA repair and recombination proteins [BR:
kmx03400
]
KLMA_60512 (RPB1)
Enzymes [BR:
kmx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
KLMA_60512 (RPB1)
Transcription machinery [BR:
kmx03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
KLMA_60512 (RPB1)
DNA repair and recombination proteins [BR:
kmx03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
KLMA_60512 (RPB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_6
RNA_pol_Rpb1_3
RNA_pol_Rpb1_7
RNA_pol_Rpb1_4
RNA_pol_Rpb1_R
Motif
Other DBs
NCBI-GeneID:
34717724
NCBI-ProteinID:
XP_022677581
UniProt:
W0TFI3
LinkDB
All DBs
Position
6:1086996..1092179
Genome browser
AA seq
1727 aa
AA seq
DB search
MVDFPYSSAPLRTIKEVQFGLFSPEEVRGISVAKIEFPETMDESQMKAKIGGLNDPRLGS
IDRNYKCQTCGEGMSECPGHFGHIELAKPVFHIGFISKIKKVCECVCMHCGKLLLDEYNE
QMRQAIKIKDSKRRFNAVWTLCKTKMVCETEVPSPDDPTVFISRGGCGHIQPSIRKDGLS
LVGTWKKDKNAEDSDQPEKRIISAEEILNVFKHISPEDGWRLGFNEDFSRPEWMILTVLP
VPPPPVRPSISFNESQRGEDDLTYKLGDILKANINVQKLEINGSPQHVIQESESLLQFHV
ATYMDNDIAGQPQAVQKSGRPIKSIRARLKGKEGRIRGNLMGKRVDFSARTVISGDPNLD
LDQVGVPKSIAKTLTYPEVVTPYNIDRLTQLVRNGPNEHPGAKYVIRENGDRIDLRYSKR
AGDIQLQYGWKVERHITDNDPVLFNRQPSLHKMSMMAHRVKVMPYSTFRLNLSVTSPYNA
DFDGDEMNLHVPQSEETRAELSQLCAVPLQIVSPQSNKPCMGIVQDTLCGIRKMTLRDTF
IEIDQVLNMLYWIPDWDGIIPTPAILKPKPLWSGKQILSMAIPNGIHLQRFDDGTTFLSP
KDNGMLIIDGQIIFGVVDKKTVGSSSGGLIHVVTREKGPEICARLFSNIQKVVNYWFLHN
GFSIGIGDTIADEKTMREITEAIAIAKKKVEDVTKEAQANLLTAKHGMTLRESFEDNVVR
YLNEARDKAGRSAEVNLKDLNNVKQMVSAGSKGSFINIAQMSACVGQQSVEGKRIAFGFA
DRTLPHFSKDDYSPESKGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTAETGYIQRR
LVKALEDIMVHYDGTTRNSLGNVIQFIYGEDGMDASHIEKQSIDTIPGSDAAFEKRYKID
LLNEEYSLDPSLLESGSEIIGDSKLQLLLNEEYKQLVEDRQSLRKIFVDGEHNWPLPVNI
KRIIQNSQQTFRVDLTKPTDLTIEDVIHGVQNLQKKLLIVRGQSDILKEAQKNAITLFCC
LLRSRLATRRVIEEYRLNKQTFEWVLNNIEAQFLRSIVHPGEMVGVLAAQSIGEPATQMT
LNTFHFAGVASKKVTSGVPRLKEILNVAKNMKTPSLTVYLDPEYASDQEKAKEIRSAIEH
TTLKSVTVASEIYYDPDPRSTVIEEDEEIIQLHFSLMDEETEKSLDYQSPWLLRLELDRA
AMTDKDLTMGQVGEKIKETFKNDLFVIWSEDNADRLIIRCRVIRDPKTLDADVEAEEDHM
LKKIENSMLQKITLRGVEDITRVVMMKYDRKIPSETGEYHKVPEWVLETDGVNLSEVMSV
PGVDSSRIYTNSFIDIMNVLGIEAGRAALYREVYNVIASDGSYVNYRHMALLVDVMTSQG
FLMSVTRHGFNRADTGALMRCSFEETVEILFEAGAAAELDDCRGVSENVILGQMAPIGTG
AFDVMIDDESLVKYMPEHKEVKTEGQDGGATPYSNDSGLANAEIDVKDELMFSPLVESGG
ADALSGGFTAYGGTDYGSATSPFSGYGNAPTSPGFGEATSPSYSPTSPAYSPTSPSYSPT
SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSY
SPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTS
PSYSPTSPSYSPTSPSYSPTSPQYNPGSYSPADPKKEESDEEKKDNK
NT seq
5184 nt
NT seq
+upstream
nt +downstream
nt
atggttgattttccttactcaagtgcaccccttcgtaccatcaaagaagtccaattcggt
ctcttttctcctgaagaagtccgtggtatttctgttgctaagattgaattcccagaaaca
atggacgagagtcaaatgaaagctaaaataggtgggcttaacgatccaagattgggttct
attgatcgtaactataagtgtcaaacctgtggtgaaggcatgagtgagtgtcctggtcat
tttggtcatattgagcttgcgaagcctgttttccatatcggttttatatctaaaatcaag
aaggtttgcgaatgtgtatgtatgcactgtggtaaattgcttctagatgagtataacgaa
caaatgagacaggctatcaaaatcaaagactcgaagagaagatttaacgctgtttggact
ttatgtaaaactaaaatggtatgtgagaccgaagttccatcacctgatgacccaacagtg
tttatttccagaggtggatgtggtcatatccaaccaagtattcgtaaggatggtctaagt
ttagttggtacctggaaaaaggataaaaatgccgaagactctgaccaacctgaaaagcgt
attatctctgctgaggaaattttgaacgtcttcaaacatatctccccagaagatggatgg
aggcttgggttcaatgaagacttctctcgtcctgagtggatgattctaacagtgttacca
gttcctcctcctccagttcgtccatctatttccttcaatgaatctcaaagaggtgaagat
gatttgacttataaacttggggatatcttgaaagctaacataaatgtccaaaaactagaa
ataaacggttctccacaacacgttattcaggaatcggaatctttgttgcaattccatgtt
gcaacatacatggacaacgatattgctggtcaaccacaagctgttcaaaaatccggtcgt
cctattaaatcgatccgtgcccgtttaaaaggtaaggaaggacgtatcagaggtaacctt
atggggaagcgtgtagatttctctgctcgtaccgttatttctggtgatcctaatttagac
ttggatcaagttggtgttccaaagtctattgctaagacactaacataccctgaagttgtg
accccgtacaatattgaccgtttaactcaattggtgcgcaatggtccaaatgaacaccca
ggtgctaaatacgttatccgtgaaaatggtgatcgtattgatttgagatacagtaagaga
gcaggtgatatccaactacagtatggttggaaagtggaacgtcacatcactgataatgat
cccgttttattcaatcgtcaaccatcccttcacaagatgtctatgatggcacacagagtt
aaggttatgccgtattctaccttcaggctaaatttgtctgttacatccccttataatgca
gattttgatggtgacgaaatgaatttacacgttccacaatctgaagaaacaagagccgaa
ctatctcagttatgtgccgttcctctacaaattgtgtccccacaatcgaataagccatgt
atgggtattgttcaagatacgctatgtggtattcgtaaaatgactttaagagatactttc
atagagatcgatcaggtgctaaatatgctttactggattcccgactgggacggtattatc
ccaacaccagctattctcaaaccaaaacctttatggtctggtaaacagattctctctatg
gccattccaaatggtattcacttacaacgttttgatgatggaaccacatttttatcacct
aaggacaacggtatgttaattattgacggtcaaattatttttggtgtcgtagataaaaag
actgttggttcttcaagtggtggtttgatccatgttgtaacaagagaaaaaggaccagaa
atctgcgctcgtcttttcagtaatatccaaaaagttgtgaactactggttcttacacaac
ggtttttccattggtattggtgatacaatcgccgatgaaaagactatgagagaaattact
gaagcaattgccattgccaaaaagaaggtcgaggatgttaccaaagaagcacaagcgaac
ttgctaacagccaaacatggtatgactctacgtgaatcctttgaggataatgttgttcgt
tacttgaacgaggcaagagacaaagcaggtcgttcagcagaagttaacttgaaggatttg
aataatgtgaaacagatggtcagtgcaggttcaaagggttcctttattaacattgcccaa
atgtctgcctgtgttggtcaacaatcggtggaaggtaagcgtattgctttcgggtttgcc
gatcgtaccctaccacatttctctaaggatgactactctccagaatcaaagggtttcgtt
gaaaactcttacttgagaggtttaactcctcaagagttctttttccatgcgatgggtggt
cgtgaaggtttgattgatactgctgtgaaaacagcagagaccgggtatatccaacgtcgt
ttagttaaagctttagaagatattatggttcattacgatggtactacgagaaactcgtta
ggtaacgttattcaattcatctatggtgaagatggtatggacgcttctcatatcgaaaaa
caatctatcgacaccattcccggatcggacgctgcatttgagaagcgttataagatcgac
ttattgaacgaggaatactctcttgatccttctctcttggaatctggttctgaaatcatt
ggtgactccaaattacagttgttactcaatgaggagtacaaacaattagtcgaggatcgt
caatcattgagaaagatatttgttgatggtgaacacaattggccattaccagtcaatatc
aaacgtattattcagaactctcaacagactttccgtgtcgatttaacaaagccaacagat
ctcactattgaagatgttattcacggtgttcagaatctacaaaagaagttattaatcgta
cgtggtcaaagcgatatcctaaaagaagctcaaaagaacgctattaccctattctgttgt
ttgttgcgttctcgtttggcaactcgtagagtaatcgaagagtacagactaaacaaacaa
acctttgaatgggtattgaataacattgaagctcaattcttaagatctatagtccatcct
ggtgagatggttggtgttttagcagcacaatctattggtgaacctgctacccaaatgacc
ttaaacacattccattttgctggtgtggcctccaagaaggtgacttcaggtgttccacgt
ttaaaggaaattttgaatgtggctaaaaacatgaaaacaccatcacttacggtgtatttg
gatccagaatatgcgtcagatcaagaaaaggctaaggaaattcgttctgctatcgaacat
actacgcttaaaagtgtcaccgttgcctctgagatttattatgatccagatcctcgctcg
actgttatagaagaagatgaagaaattattcagttacatttctccttgatggacgaagaa
accgaaaaatctcttgattatcaatctccttggttgctacgtctagagcttgatcgtgct
gcaatgaccgataaagacttaaccatgggtcaagttggtgagaagatcaaagaaacattt
aagaatgacttgtttgtcatatggtccgaagataacgctgacagattaattattcgttgc
cgtgttattcgtgatccaaagaccctagatgctgatgttgaggcagaggaagatcatatg
ttaaagaagattgaaaattccatgcttcagaagattactctgcgtggtgttgaagatatt
actcgtgtcgtgatgatgaaatacgatagaaagattccaagtgaaacaggtgaatatcat
aaagttccagaatgggttttggaaacagatggtgttaatttatctgaagttatgtctgtt
ccaggtgttgattcaagccgtatttataccaattccttcattgatataatgaatgtgttg
ggtattgaggctggtcgtgctgcgttgtacagagaagtttataacgttattgcatccgat
ggttcttatgtgaactaccgtcatatggcattgctagtcgatgttatgacttctcaaggt
ttcttgatgtcggtcacacgtcatggtttcaacagagctgataccggtgcactaatgaga
tgttctttcgaagagacagtagaaattctatttgaagccggtgcggcagccgaattggac
gattgccgtggtgtttctgaaaacgtgatccttggccaaatggctcctattggtactggt
gcctttgacgtcatgatagatgatgagtcattagtgaaatacatgcctgaacataaagaa
gtcaagactgaaggacaagatggaggtgctactccatattctaacgatagcggtctagca
aatgccgaaattgacgtcaaggatgaactaatgttctctcctttggtagaatcaggcgga
gctgacgctttatcaggaggattcaccgcatatggtggaacagattatggttctgcaact
tctccattcagtggatatggcaatgctccaacatcacctggatttggtgaagctacatca
ccatcatattctccaacgtctccagcttattcaccaacatcaccatcatactcaccaacc
tcgccatcatactctcctacatcaccatcatactctcctacatcaccatcgtactcccca
acctcaccatcgtactcaccaacatctccatcgtactcaccaacatcgccatcgtattca
ccaacttcgccatcatactctcctacatcaccatcatattcaccaacctcgccatcatac
tctcctacatcaccatcatactctcctacgtcaccatcatactctcctacatcaccatca
tactcaccaacctcgccatcatactctcctacatcaccatcatattcaccaacatcacca
tcatactcacctacatcgccatcatactcaccaacatcaccatcatactcacctacatcg
ccatcatactcaccaacgtcaccatcttactcgcctacatcaccatcgtactcaccaaca
tctcctcaatataatcctggttcatactctcctgcggatccaaagaaggaggaatctgat
gaagaaaagaaggataacaaataa
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integrated database retrieval system
