KEGG   Kluyveromyces marxianus: KLMA_70399
Entry
KLMA_70399        CDS       T05269                                 
Symbol
CAF40
Name
(RefSeq) protein CAF40
  KO
K12606  CCR4-NOT transcription complex subunit 9
Organism
kmx  Kluyveromyces marxianus
Pathway
kmx03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:kmx00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    KLMA_70399 (CAF40)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:kmx03019]
    KLMA_70399 (CAF40)
Messenger RNA biogenesis [BR:kmx03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Ccr4-NOT complex
     KLMA_70399 (CAF40)
SSDB
Motif
Pfam: Rcd1
Other DBs
NCBI-GeneID: 34718141
NCBI-ProteinID: XP_022677998
UniProt: W0TF35
LinkDB
Position
7:816815..818050
AA seq 411 aa
MFQAQTQGQMQSQMQGQLQGQPQGQPQAPVPGNMFTEQTRRKYFPQLKPYFPGQPGQPGQ
PGQPGQPGQQNQIPQGQQNQIPPGLQHPQENSGQGQGPNQGPNQGPVPAPGAAPGPGIVH
ALDDPNVYHWICQLTYGPSKEQALLELGKKREQYEDLAIVLWSSFGVMTSLIKEIISVYP
LLSPPALSNQLSNRVCNALVLLQCVASHPDIRPQFLQAHIPLFLFPFLSTTSNQRTFEYL
RLTSLGVIGALVKNDSAEVISFLLRTDIIPLCLRIMENSSELSKIVAIFILQKILLDDNG
LQFVCATPERFYAVSQVLATMFKHMSQQQVPGRLLKHVVRCYLRLSDNLEARRLLKQVLP
QQLRDNTFTEALQDDVGTKRCLAQLLLTLGEGQQQPPQPQPQQQPQQQQQQ
NT seq 1236 nt   +upstreamnt  +downstreamnt
atgttccaggcccagactcaaggccagatgcaatctcagatgcagggacagctccaggga
cagccccagggccagcctcaggcgcccgttccaggaaacatgtttaccgaacaaactcgc
agaaagtatttcccacagctcaaaccatacttccctggccagcctggccagccaggacaa
ccaggacaaccaggacaaccaggacaacagaaccagattccccagggtcaacaaaaccag
attcctccaggattacagcatccccaagaaaactcaggccaaggccagggcccaaaccag
ggcccaaaccagggccctgtgccagcacctggagcagcccctggccccggtatagtacac
gccttggacgatcctaacgtctaccattggatctgccagctcacgtacgggcccagcaaa
gaacaagcactcctagaattaggcaaaaaaagagaacaatacgaagacctggccatcgtg
ttatggtctagtttcggcgtcatgacctcccttataaaagaaatcatatcagtatacccg
ttgctatcgcctccagcactctcgaaccaactctcgaaccgtgtttgcaacgctttggtc
cttctccaatgcgtcgcctcccatccggatatcagaccccaattcctacaggcacacatt
cctcttttcctattcccattcttgtccaccacctcgaaccaaagaaccttcgagtacctc
agattgacctccttgggtgtcattggcgccctagtcaagaacgactccgcagaagtcatc
agcttcttgctaagaacagacatcatcccgctgtgtctcagaatcatggaaaactcctcc
gaactctccaaaatcgtcgccatcttcatcctacagaaaatcttgctcgacgataacggc
ctacagttcgtttgtgctactccagaacgtttctacgccgtctctcaggtcttggccacc
atgttcaaacacatgtcccagcaacaggtgcccggcagactattgaaacacgtcgtcagg
tgctacctaagactatcggataacttagaagcaagaagactgttgaagcaggtcttgccc
cagcagctaagagacaacactttcaccgaggcattgcaggacgacgtgggcacaaaacgt
tgtcttgctcaattgctcctgaccctaggcgagggccagcagcaaccaccacaaccacaa
ccacaacaacaaccacaacagcagcagcagcagtag

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