Kluyveromyces marxianus: KLMA_80112
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Entry
KLMA_80112 CDS
T05269
Symbol
PUB1
Name
(RefSeq) nuclear and cytoplasmic polyadenylated RNA-binding protein PUB1
KO
K13201
nucleolysin TIA-1/TIAR
Organism
kmx
Kluyveromyces marxianus
Brite
KEGG Orthology (KO) [BR:
kmx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kmx03019
]
KLMA_80112 (PUB1)
03041 Spliceosome [BR:
kmx03041
]
KLMA_80112 (PUB1)
Messenger RNA biogenesis [BR:
kmx03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
KLMA_80112 (PUB1)
Spliceosome [BR:
kmx03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
KLMA_80112 (PUB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
RRM_5
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
34718309
NCBI-ProteinID:
XP_022678166
UniProt:
W0TH90
LinkDB
All DBs
Position
8:complement(259981..261372)
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AA seq
463 aa
AA seq
DB search
MSEETKNNEQEVQQEVQAGEVEGSVEANVEVNVEKGNEESVEVSEEVSGEENAAEGTSEK
EEESGAAPVLATQGGREKSDKILYVGNLPKNIDDDLLKQYFQIGGAISSVKIIPDKNSQE
CNYAFVEYFQPHDASVAYETLNGKEVEGKVLKINWAFQSQQVNSEETFNLFVGDLNVDVN
DATLADTFKEFPSFIQAHVMWDMQSGRSRGYGFVSFGQQEQAQLAMETKQGFELNGRALR
INWASKREPQQNQNQNQNGARRYGNGPSGGRGNFRGHNNNHHHHNNNSNRHPGAGGPPPP
PPHHQMQAHLPPQLQQQPPMGMPPMHQAPLVPPPVDPEAVEDMMRGAPPRVTTAYIGNIP
HFAQEHDLIPLLQNFGFIIDFKHYPEKGCCFIKYDTHEQAALCIVALTNFLFQGRNLRTG
WGKEKPTFIRPQQQLGPMPPVSMQVPVPAESSVEPQLENDQEQ
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaagaaacgaagaataacgagcaggaggtgcaacaagaggttcaagcgggtgaa
gttgaaggtagtgttgaagccaatgttgaagttaatgttgagaagggaaacgaggaatct
gtagaggtttcagaggaagtttcaggcgaggaaaacgcagcagaaggaacatctgagaag
gaagaagagtctggagctgcgccagttttggctacgcagggtggtcgtgagaagtctgac
aagattttatatgtggggaacttgcccaagaacattgacgacgatcttttgaagcagtac
ttccagatcgggggtgcgatttctagcgtgaagatcattcctgacaagaacagtcaagag
tgcaactatgcatttgtggagtacttccagccccacgatgctagtgtagcatacgagacg
ttgaacgggaaggaagttgaggggaaggtgttgaagatcaactgggcgttccagtcgcaa
caggtgaatagcgaagagacattcaacttgtttgttggtgatttgaacgtggacgtgaac
gatgctacgcttgcagacacgttcaaggagttcccatcgttcatccaggcgcatgtcatg
tgggacatgcaatccgggagatcgagagggtacggtttcgtgtcgtttggacagcaagag
caggcgcaattggcgatggagacgaagcaaggcttcgagttgaacggcagggctttgaga
atcaactgggcctcgaaacgtgaaccacaacagaaccagaaccagaaccagaacggggcc
agaagatacggaaacggaccttctggtggccgtggcaacttccgcggacacaacaataac
caccaccaccacaacaacaacagtaatagacatccaggcgcaggcgggcctcctccacca
ccaccacaccaccaaatgcaagcgcacctacccccacaattgcaacaacaaccaccaatg
ggcatgcccccaatgcaccaggcccctctagtccctcctcctgtcgacccagaagccgtc
gaagacatgatgagaggtgcccctccaagagtcaccaccgcgtacattggaaacatcccc
cacttcgcccaggaacacgacttgatcccattgctacaaaacttcggcttcatcatcgac
ttcaagcactacccagaaaagggctgctgcttcataaaatatgacacccacgagcaggcc
gctttgtgtatcgttgccctaacaaacttcttgttccaaggcagaaacttgagaaccggc
tggggtaaagaaaaaccaacattcatccgtcctcaacagcaactgggcccaatgccacca
gtctcaatgcaagtcccagtgccagccgagtcctcagtcgaaccccaattggaaaacgac
caggaacaatga
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