Kluyveromyces marxianus: KLMA_80300
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Entry
KLMA_80300 CDS
T05269
Symbol
NOT5
Name
(RefSeq) general negative regulator of transcription subunit 5
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
kmx
Kluyveromyces marxianus
Pathway
kmx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
kmx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KLMA_80300 (NOT5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kmx03019
]
KLMA_80300 (NOT5)
Messenger RNA biogenesis [BR:
kmx03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
KLMA_80300 (NOT5)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
KLMA_80300 (NOT5)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
34718492
NCBI-ProteinID:
XP_022678349
UniProt:
W0TIE9
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Position
8:664649..666445
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AA seq
598 aa
AA seq
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MSQRKLQQEVDKVLKKVKEGLEEYEEIYEKFQNTESDNQSYREKLESDLKREIKKLQKHR
EQIKNWLSKDDIKDRADVLMENRRLIESGMERFKSIEKIMKTKKFSTEALTNPDLIKDPR
ELKKRDQFLFVEECLEELQKQLDAFEVENNEEQIEKHTFHISNLENILKLLQNDDLDPET
VQDFQEDIRYYVDNNDDPDFVDYDTIYQDMGCEIQPEDLLKEQSTPSKPKRSERSPRKKA
SPAPASLKSSTSSPRVTATSTVPSAQQQQESDNQDNASGAADTSDAATAAATAAAAAASN
SSSAQNNDTNNDEKGNSNVDESNNASSKGTDSPSSAAVAAAVAATNGSAQSAGSTSATQT
TTTPTTSSSTKSKKDKEPTPIPQAEDLPPPKDLSQEIEEILAKDLENKLAFKDPLFKEEL
PYWLETKKKLIQPPKEIDDFTLKHLESSLLNCPDSLDADTPRLFENPLSLPHPTSIFFPH
EPIRFMAQDLPAKGDDLYGKISVAKIMSKFALDTLFFIFYHYQGSYDQFLASRELSLRGW
KFNKVNHCWFHKEVEKLPPGIEGKEEVTWRYFDYQKAWLSRRCGADFEYKEEEFEKLW
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcaaagaaagctgcaacaggaggttgacaaggtgttgaagaaggttaaggaagga
ttggaggagtacgaggagatatatgagaagttccagaatacagagtccgataaccagtcg
tacagggaaaagcttgaatcagatttgaagcgtgaaattaagaagttgcagaaacataga
gaacaaatcaagaattggttgagtaaagatgatatcaaggaccgtgcggatgtgttgatg
gagaatcgtaggctgattgaaagcgggatggagagatttaagtctattgagaagattatg
aagacgaaaaaattctcaacagaagcgttaacgaatccggatttgatcaaagatcctcga
gaacttaagaaaagagaccagtttttgtttgttgaagagtgtcttgaggagttgcaaaag
cagctggatgcatttgaagtagagaataatgaagaacagatagaaaaacacactttccac
atctccaacttggaaaatatccttaagctcttgcaaaacgacgatttggacccagaaacg
gtccaagatttccaagaagatatcaggtactacgtggataataacgacgaccctgacttt
gtggattatgatactatctaccaagatatgggttgcgaaatacagccagaagaccttttg
aaggagcaaagcaccccaagcaaaccaaagagaagcgaacggtctcctagaaagaaggcc
tctccagccccagcttccctaaagtcgagtacatcttctccaagagtaacagcaacttca
acggtgccttcggctcagcaacagcaagaatcagataaccaggataacgcctctggcgcc
gctgatacttccgacgctgctactgcggctgcaaccgcggcggctgctgctgcctctaat
tcttctagcgctcagaataatgatactaataacgatgaaaaaggtaatagcaatgtcgat
gaatccaacaatgcatcatcaaagggtaccgactcgccatcttcggctgctgtcgccgct
gctgtcgctgctacaaatggatcggctcaaagtgcaggctcgacgtcagcaacccagaca
acaacgacacctaccaccagcagtagcacgaaatccaagaaagataaggaaccaacccca
attccacaagcagaagatctccccccaccaaaggatctctcgcaagaaatagaagagatt
cttgcaaaagatttggaaaataaattagcattcaaagatcccctattcaaggaagaattg
ccttactggttagaaaccaaaaagaagttaattcaacctccaaaagagattgacgatttc
acgttgaagcatttggagtcatccttactaaactgtccagattccctagatgctgatacc
cctcgtcttttcgaaaaccctctatcactaccacaccccacatctatctttttcccacac
gaaccgattagatttatggctcaagatttacctgccaaaggtgacgacctgtacggaaaa
atttctgtcgctaagataatgtcaaagtttgcccttgatacactgttctttatattctat
cactatcaaggatcatatgatcaattcttggctagtagggaattgtcgttacgtggttgg
aaatttaataaagtcaaccattgttggtttcataaagaggtggaaaaacttccacctgga
atagagggtaaagaagaagttacttggagatacttcgattatcaaaaagcatggctgtca
agaaggtgtggtgcagacttcgaatacaaggaagaagagtttgaaaaactatggtga
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