Kluyveromyces marxianus: KLMA_80400
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Entry
KLMA_80400 CDS
T05269
Symbol
CDC40
Name
(RefSeq) pre-mRNA-processing factor 17
KO
K12816
pre-mRNA-processing factor 17
Organism
kmx
Kluyveromyces marxianus
Pathway
kmx03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
kmx00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
KLMA_80400 (CDC40)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
kmx03041
]
KLMA_80400 (CDC40)
Spliceosome [BR:
kmx03041
]
Complex C
Other components
Step II factors
KLMA_80400 (CDC40)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
EIF3I
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_IFT122_1st
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
Beta-prop_RIG_2nd
Beta-prop_TEP1_C
Beta-prop_TEP1_2nd
WD40_RFWD3
Beta-prop_SPT8
Beta-prop_EIPR1
WDR90_beta-prop_4th
Beta-prop_IFT140_1st
Beta-prop_Vps41
Beta-prop_WDR19_1st
Beta-prop_DCAF4
WD40_MABP1-WDR62_1st
NBCH_WD40
Beta-prop_WDR75_1st
Pep3_Vps18
Beta-prop_WDR35_TULP_N
Beta-prop_HPS5
PD40
Motif
Other DBs
NCBI-GeneID:
34718587
NCBI-ProteinID:
XP_022678444
UniProt:
W0TIQ6
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All DBs
Position
8:860235..861524
Genome browser
AA seq
429 aa
AA seq
DB search
MSLVQGYDTDSSDEDTQDFNKKHKLQTPKLKSKRPKRNGKGPWASWESSSEAEQDEEVQT
TNIPNAGNSDMGDDIDSSVSFNQEKSTFVGKREKDYQGRSFMHPPIDVEVDLKKEPLSFK
CFLPKRKVAEYTGHKNGTTSLRFLPHSGHLFLSGGNDKTIKIWDFYHNRELLRTYEGHSM
TIKDLNFTHDGETFASASFDKSVKVWNTERGSISKRLRFNAVPNCIMFHPEDKNQLVIGL
SNSEILHYDFRVDEKDGKIQKYDHHQGSILALKYFPNGKKLISSSDDKTVRIWENQINVP
IKQISGTTQHSMPWIDINPQEQYFCTQSMDNTIYTYSMMPKYKRHPSKMFKGHSTAGYGI
HFAFSPDGQYIASGDSKGQTFIWDWKTTKVLKKFKPLSNNLPITCLAWNPQETSKLCCAG
NDGRIVVLD
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atgtctttagtccagggatatgatacagatagcagcgatgaagatactcaggattttaac
aagaaacataagcttcaaaccccaaaattgaagagcaaacgacctaagcgcaacggtaag
ggtccatgggcaagttgggagagttccagcgaagcagaacaagatgaagaagttcaaacg
actaacataccgaatgccggaaattctgacatgggtgatgatatagattcaagtgtatct
tttaaccaagagaaatccacttttgtaggaaagagagagaaggattatcaaggcagatct
tttatgcatccaccgattgatgttgaagtagatctcaaaaaagaacctctatcattcaaa
tgttttttacctaaaagaaaagtagcagagtatactggccataaaaatggtactacgtct
ctcaggtttctacctcattctggtcatttgtttttatccggcggaaacgataaaacgata
aaaatatgggacttttatcacaatcgagaacttttaagaacttatgaaggacactctatg
accattaaagacttaaatttcactcatgatggtgaaacgtttgccagtgcatcttttgat
aaaagtgttaaagtttggaatacagaaagaggatctatttcaaaacgtttacgctttaat
gctgttccaaattgtattatgtttcacccagaggataaaaaccaattggtcatcgggttg
tcaaattctgaaattttgcactatgattttagagtagatgagaaggatggtaaaatacaa
aagtacgatcatcatcaaggttcaatcctagcattaaaatattttcctaatggtaaaaaa
ctaatatcatcatcagatgacaaaactgttagaatatgggaaaatcaaatcaatgtgccc
attaagcaaattagtggcacaacccagcattcgatgccctggattgatatcaacccccag
gaacaatacttttgcacacagagtatggataacacaatatatacttattcgatgatgcca
aaatacaaacggcatcctagtaaaatgttcaagggtcatagtactgctggttatggaatt
cattttgcattttctcctgacggacaatatatagcctctggtgattcgaaaggacaaacc
tttatatgggattggaaaactaccaaggtgttaaaaaagtttaagccgctatcaaacaac
ctaccaatcacctgtcttgcctggaatccacaagaaacaagtaaactctgctgtgctgga
aatgatggaaggattgtagtattagattaa
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