KEGG   Kluyveromyces marxianus: KLMA_80400
Entry
KLMA_80400        CDS       T05269                                 
Symbol
CDC40
Name
(RefSeq) pre-mRNA-processing factor 17
  KO
K12816  pre-mRNA-processing factor 17
Organism
kmx  Kluyveromyces marxianus
Pathway
kmx03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:kmx00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    KLMA_80400 (CDC40)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:kmx03041]
    KLMA_80400 (CDC40)
Spliceosome [BR:kmx03041]
 Complex C
  Other components
   Step II factors
    KLMA_80400 (CDC40)
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 WDR55 EIF3I Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_IFT122_1st Beta-prop_CAF1B_HIR1 ANAPC4_WD40 Beta-prop_RIG_2nd Beta-prop_TEP1_C Beta-prop_TEP1_2nd WD40_RFWD3 Beta-prop_SPT8 Beta-prop_EIPR1 WDR90_beta-prop_4th Beta-prop_IFT140_1st Beta-prop_Vps41 Beta-prop_WDR19_1st Beta-prop_DCAF4 WD40_MABP1-WDR62_1st NBCH_WD40 Beta-prop_WDR75_1st Pep3_Vps18 Beta-prop_WDR35_TULP_N Beta-prop_HPS5 PD40
Other DBs
NCBI-GeneID: 34718587
NCBI-ProteinID: XP_022678444
UniProt: W0TIQ6
LinkDB
Position
8:860235..861524
AA seq 429 aa
MSLVQGYDTDSSDEDTQDFNKKHKLQTPKLKSKRPKRNGKGPWASWESSSEAEQDEEVQT
TNIPNAGNSDMGDDIDSSVSFNQEKSTFVGKREKDYQGRSFMHPPIDVEVDLKKEPLSFK
CFLPKRKVAEYTGHKNGTTSLRFLPHSGHLFLSGGNDKTIKIWDFYHNRELLRTYEGHSM
TIKDLNFTHDGETFASASFDKSVKVWNTERGSISKRLRFNAVPNCIMFHPEDKNQLVIGL
SNSEILHYDFRVDEKDGKIQKYDHHQGSILALKYFPNGKKLISSSDDKTVRIWENQINVP
IKQISGTTQHSMPWIDINPQEQYFCTQSMDNTIYTYSMMPKYKRHPSKMFKGHSTAGYGI
HFAFSPDGQYIASGDSKGQTFIWDWKTTKVLKKFKPLSNNLPITCLAWNPQETSKLCCAG
NDGRIVVLD
NT seq 1290 nt   +upstreamnt  +downstreamnt
atgtctttagtccagggatatgatacagatagcagcgatgaagatactcaggattttaac
aagaaacataagcttcaaaccccaaaattgaagagcaaacgacctaagcgcaacggtaag
ggtccatgggcaagttgggagagttccagcgaagcagaacaagatgaagaagttcaaacg
actaacataccgaatgccggaaattctgacatgggtgatgatatagattcaagtgtatct
tttaaccaagagaaatccacttttgtaggaaagagagagaaggattatcaaggcagatct
tttatgcatccaccgattgatgttgaagtagatctcaaaaaagaacctctatcattcaaa
tgttttttacctaaaagaaaagtagcagagtatactggccataaaaatggtactacgtct
ctcaggtttctacctcattctggtcatttgtttttatccggcggaaacgataaaacgata
aaaatatgggacttttatcacaatcgagaacttttaagaacttatgaaggacactctatg
accattaaagacttaaatttcactcatgatggtgaaacgtttgccagtgcatcttttgat
aaaagtgttaaagtttggaatacagaaagaggatctatttcaaaacgtttacgctttaat
gctgttccaaattgtattatgtttcacccagaggataaaaaccaattggtcatcgggttg
tcaaattctgaaattttgcactatgattttagagtagatgagaaggatggtaaaatacaa
aagtacgatcatcatcaaggttcaatcctagcattaaaatattttcctaatggtaaaaaa
ctaatatcatcatcagatgacaaaactgttagaatatgggaaaatcaaatcaatgtgccc
attaagcaaattagtggcacaacccagcattcgatgccctggattgatatcaacccccag
gaacaatacttttgcacacagagtatggataacacaatatatacttattcgatgatgcca
aaatacaaacggcatcctagtaaaatgttcaagggtcatagtactgctggttatggaatt
cattttgcattttctcctgacggacaatatatagcctctggtgattcgaaaggacaaacc
tttatatgggattggaaaactaccaaggtgttaaaaaagtttaagccgctatcaaacaac
ctaccaatcacctgtcttgcctggaatccacaagaaacaagtaaactctgctgtgctgga
aatgatggaaggattgtagtattagattaa

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