Komagataeibacter nataicola: B0W47_01925
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Entry
B0W47_01925 CDS
T04737
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
kna
Komagataeibacter nataicola
Pathway
kna03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
kna00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
B0W47_01925
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kna03019
]
B0W47_01925
Enzymes [BR:
kna01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
B0W47_01925
Messenger RNA biogenesis [BR:
kna03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
B0W47_01925
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_11
CMS1
P-loop_SecA
Motif
Other DBs
NCBI-ProteinID:
AQU86414
UniProt:
A0A9N7GZA2
LinkDB
All DBs
Position
complement(388562..389848)
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AA seq
428 aa
AA seq
DB search
MSMTFADLALAPELLSALAEEGYAHPTPIQAGSIPMLLEGRDLLGMAQTGTGKTASFALP
LLHRLAMTPRPAPKGGARVLVLAPTRELVSQIADGFTGFGRHFKPSITTIFGGVSPFHQI
NALKEGVDIIVATPGRLLDLITQGACDLSQLEALVLDEADQMLDMGFAKPIERIVATLPA
ARQTVLFSATMPKSITTLAESLLRDPARVEITPPSTTVERIEQSVMFVDAADKKAALLEL
LRTPGMGQAVVFTLQKNIANEVCAFITEAGITAEALHGNKSQGQRERALEAFRCGAAQVL
VATDIAARGIDVDTVTHVFNHDLPSLPESYVHRIGRTGRAGRTGFAITLCDAEQRAWLHD
VEREIGRPLDVQADHPWHSEAARNSTMRAPVLGGGPVKQVKPQKKRERKVWTEEEKNAAR
EAAKAAKA
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgtccatgacctttgccgatcttgccctggcgccagaactcctgagcgcactggccgag
gaaggttacgcccaccccaccccgatccaggccgggtccatcccgatgctgctggaaggc
cgcgacctgctgggcatggcccagaccggcacgggcaagacggcctcctttgcgctgccg
ctgctccatcgccttgccatgaccccccgccccgcgccaaagggtggcgcgcgcgtgctg
gtactggcccccacgcgcgagctggtatcccagatcgccgatgggtttacgggcttcggg
cggcacttcaagcccagcattacaacgattttcggtggcgtcagcccgtttcaccagatc
aatgcgctcaaggagggggtggacatcatcgtggccacgccagggcggctgctggacctg
attacccagggcgcgtgcgacctgtcgcagcttgaggctctggtgctggatgaggcggac
cagatgctcgacatgggatttgccaagcccatcgagcgtattgtcgcaaccctgcccgca
gcccggcagaccgtgctgttttcagccaccatgccaaaatccatcaccacgctggccgag
agcctgctgcgtgatccggcccgggtcgagattacgccgccctccaccaccgtggagcgg
atcgagcaatcggtcatgtttgtcgatgcggctgacaagaaggcggcactgctggaactg
ctgcgcacacccggcatgggccaggccgtggtctttaccctgcagaagaacatcgccaac
gaggtctgtgccttcattaccgaggcgggcattacggccgaggccctgcacggcaacaaa
tcacaggggcagcgtgagcgtgcgctcgaggcctttcgctgtggtgcggcacaggtgctg
gtggctaccgacatcgcggcgcgtggcatcgatgtcgatacggtgacgcatgtgttcaac
catgacctgcccagcctgcccgaaagctatgtccaccgcattggccgcaccgggcgcgcg
ggccgcacgggcttcgccataacgctttgcgatgccgagcagcgcgcctggctgcatgac
gtggagcgcgaaatcggccgcccgctggacgtgcaggcggaccatccctggcattcggaa
gccgcgcgcaactccaccatgcgcgcccccgtgcttgggggcggcccggtcaagcaggtc
aagccgcagaaaaagcgcgagcgcaaggtctggaccgaggaagagaagaacgcggcccgg
gaagcagccaaagcggccaaagcctga
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