Komagataeibacter nataicola: B0W47_03960
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Entry
B0W47_03960 CDS
T04737
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
kna
Komagataeibacter nataicola
Pathway
kna03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
kna00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
B0W47_03960
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kna03019
]
B0W47_03960
Enzymes [BR:
kna01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
B0W47_03960
Messenger RNA biogenesis [BR:
kna03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
B0W47_03960
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_30
AAA_22
CHASE8
YbbR
Utp25_C
Motif
Other DBs
NCBI-ProteinID:
AQU86752
UniProt:
A0A9N7C7M9
LinkDB
All DBs
Position
complement(808517..809860)
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AA seq
447 aa
AA seq
DB search
MTTTFADLHLAEPLLRALDEEGYATPTPIQAGAIPYLLEGRDLLGLAQTGTGKTAAFALP
ILDRLFREKGRAHPKGARALVLAPTRELASQIGESFASYARHMRFSHAVVFGGVGQGRQI
EALRRGVDVLVAAPGRLLDLMGQGHVDLSGLEVLVLDEADRMLDMGFVRDIRKIVAALPT
DRQTLLFSATMPKTISDLAHGLLRDPATVQVTPPSSTVDRIRQAVMFVDTGNKREALKLL
VDSPKVERAVVFTLMKHEANKVATFLNEHGITAEAIHGNKSQGARERAMSGFRSGNVKVL
VATDIAARGIDVDDVTHVFNYDLPNVPESYVHRIGRTARAGREGWAVSLCDAEQRAWLRD
IEKNIGKKIPVVSEHPYHSEAAENSTMRPPVLGGGGRGRGGGGGRPGGGRPGGGGRPAGG
GRPPGGGRGGRPGGNRSGGGGGGRRAV
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgacaacgacgtttgccgatcttcatcttgcagagcccctgctgcgggcactggacgag
gaaggctacgccacgcccacccccatccaggccggcgccattccctacctgctcgaaggg
cgcgacctgctgggtctggcccagaccggcacgggcaagaccgcagccttcgcgctgccc
atccttgaccgccttttccgcgagaagggccgtgcccaccccaagggcgcgcgcgccctg
gtgctggcccccacgcgtgagctggcctcccagatcggggagagctttgcctcctacgcc
cgccacatgcgcttcagccacgctgtcgtgttcggtggcgtggggcagggccgccagatc
gaggcgctgcgccgtggcgtggacgtgctggtcgccgctcccggccgcctgctcgacctg
atgggccagggccatgtcgacctgtccggccttgaagtgctggtgctcgatgaagccgac
cgcatgctcgacatgggcttcgtgcgcgatatccgcaagattgtcgcggccctgcccacc
gatcgccagaccctgctgttctcggccaccatgcccaagaccatatcggacctggcgcat
ggcctgctgcgcgacccggccacggtgcaggtcactccgccgtccagcacggtggaccgc
atccgccaggccgtgatgtttgtcgataccggcaacaagcgcgaggcgttgaagctgctg
gtggactcgcccaaggtcgagcgcgccgtggtgttcacgctgatgaagcatgaggccaac
aaggtcgcgaccttcctcaacgagcacggcattactgccgaggccattcacggcaacaag
tcgcagggtgcgcgtgaacgcgccatgtccggcttccgttcgggcaatgtgaaggtgctg
gtggcgaccgatatcgcagcccgcggcatcgacgtggatgacgtgacccacgtgttcaac
tacgacctgcccaacgtgcccgagagctatgtgcaccgcatcgggcgcacggcgcgcgcg
gggcgcgaaggctgggcggtctcgctatgcgatgccgagcagcgcgcctggctgcgtgat
attgaaaagaatatcggcaagaagattcccgtcgtgtccgagcatccgtaccactcggaa
gctgccgagaactcgaccatgcgcccgcccgtgctcggtggcggtggccgtggccgtggt
ggcggtggtggtcgccccggcggcgggcgccccggtggtggcggtcggcctgcaggtggc
ggtcgcccgcccggtggtggccggggtggccgccccggtggcaaccgctccggcggtggt
ggcggtggccgccgcgcggtctga
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