Komagataeibacter nataicola: B0W47_06990
Help
Entry
B0W47_06990 CDS
T04737
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
kna
Komagataeibacter nataicola
Pathway
kna03410
Base excision repair
kna03430
Mismatch repair
kna03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
kna00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
B0W47_06990
03430 Mismatch repair
B0W47_06990
03440 Homologous recombination
B0W47_06990
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kna03400
]
B0W47_06990
DNA repair and recombination proteins [BR:
kna03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
B0W47_06990
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
B0W47_06990
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
B0W47_06990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Motif
Other DBs
NCBI-ProteinID:
AQU87259
UniProt:
A0A9N7CML6
LinkDB
All DBs
Position
1449003..1450856
Genome browser
AA seq
617 aa
AA seq
DB search
MPVPVTDLTSPAPAAQLAGDGAVPAVLGVTHSVTGRRWTWRAGSQASHADRMGMAIAQQT
GLPEIVGRMLALRHISPEQVESYLKPVMGRMLPDPSTLVDMDVTAERMARAIRNGETIGL
FGDYDVDGACSTALLTAFLRTQGCTVLTHIPDRMTEGYGPNIPAIEAMQAQGASLIICLD
CGTAAVEVLEHVSQRGDVIVLDHHQVQGALPRVVATVNPNRPDCPSGLRTICAAAVAFLA
AGATTRLLRSQGWFDTHPDPQLKNSLDLVALATVCDVMPLTGLNRAFVIHGLNIMAQRGR
TGLAALLEAAGARDPLSAFTCGFALGPRINAGGRIADSGLGLRLLLSDDAAEAQALADKL
NSVNHNRQSVEAGILDRAMKLAAAQREQGHAVLVLSGRDWHPGVVGIVAGRIKEKFNRPV
LVGAELDDGSVKGSARSVPGQDVGGAIIAARQAGLLTSGGGHAMAAGFGLPAEGVPALHD
FLDRYLASAADLPDAVDLTIDAVVNVAAADVALATDMDRLAPFGPGNDEPLIALPRVRVA
YAERIGREGNTLRLTLQGEDRGPRLKALVFRANESPLAPVLEDRDTPPLHLAGWLRAESW
NGRTSATFFIRDVAIAQ
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
ctgcccgtgcctgttaccgacctgacatctcccgcccccgccgcgcaactggcaggggac
ggggcggttcccgccgtgctgggggtaacccacagcgtgacagggcggcgatggacatgg
cgcgcgggcagccaggccagccacgccgaccgcatgggcatggccattgcccagcagacc
ggcctgcccgagatcgtgggccgcatgctggccctgcgccatatcagccccgaacaggtg
gaaagctacctcaagcccgtcatgggccggatgctgcctgacccctcgacgctggtggac
atggatgtgaccgccgagcggatggcgcgcgccatccgcaatggcgagaccatcgggctg
tttggcgattatgacgtggatggagcctgttccaccgcactgctgaccgccttcctgcgc
acgcagggctgcacggtgctcacccacatccccgaccgcatgacggagggctacggcccc
aacatccccgccattgaagccatgcaggctcagggcgccagcctcatcatctgcctcgac
tgcggcacggcggcggtcgaggtgctggagcatgtcagccagcgtggcgatgtgatcgtg
ctcgaccaccatcaggtgcagggcgcactgccccgcgtggtggccacggtcaaccccaac
cggcctgactgcccctccggcctgcgcaccatctgcgcggcggcggtggcctttctggcc
gccggggccacgacgcgcctgctgcgcagccaaggatggtttgacacccatcccgacccc
cagctcaagaacagcctcgatttggttgccctggctaccgtgtgcgacgtgatgccgctg
accgggctgaaccgcgccttcgtcattcatgggctgaacatcatggcacagcgcgggcgc
acggggcttgccgccctgcttgaggccgcgggcgcacgtgacccgctctccgcctttacc
tgcgggttcgcactcgggccacgcatcaatgccggggggcgcattgccgattccggactg
gggctgcggctactgctgtcagatgatgccgccgaggcgcaggcactggctgacaagctg
aattccgtcaaccacaaccgccagagcgtggaagccggcattctggaccgcgccatgaaa
ctcgccgccgcccagcgcgaacagggccatgccgtgctggtgctgagcgggcgcgactgg
caccccggcgtggtgggcatcgtggccgggcgcataaaggaaaaattcaaccgccccgtt
ctggtgggcgcggaacttgatgatggcagcgtcaagggttcggcccgctccgtgccgggg
caggatgtgggcggcgccatcattgccgcgcggcaggcggggctgctgacatcaggcggc
ggccacgccatggcggcaggcttcggcctgcctgccgaaggggttcccgcactgcacgac
ttcctcgaccggtacctggcctccgccgccgacctgcccgatgcggtggacctgaccatc
gacgccgtggtgaacgtggctgccgccgacgtggcgcttgcaaccgacatggatcgcctc
gccccctttggcccgggcaatgacgaaccgctcatcgccctgccccgtgtgcgcgtggcc
tatgccgagcggatcgggcgcgagggcaataccctgcgccttacacttcagggcgaagac
cgtggcccacggctcaaggcgctggtgttccgcgccaatgaaagcccgctcgccccggtg
ctggaagaccgcgacacgcccccgctccacctcgcgggctggctgcgggccgagagctgg
aacgggcggacatcagccacgttcttcatccgcgatgtggcgatcgctcaataa
DBGET
integrated database retrieval system
