Komagataeibacter nataicola: B0W47_09430
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Entry
B0W47_09430 CDS
T04737
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
kna
Komagataeibacter nataicola
Pathway
kna03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
kna00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
B0W47_09430
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
kna03021
]
B0W47_09430
03019 Messenger RNA biogenesis [BR:
kna03019
]
B0W47_09430
Transcription machinery [BR:
kna03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
B0W47_09430
Messenger RNA biogenesis [BR:
kna03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
B0W47_09430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
OB_RNB
AAA_25
AAA_22
S1CSD-TOTE-2
AAA
NACHT
Fungal_virus_P2_C
Motif
Other DBs
NCBI-ProteinID:
AQU87657
UniProt:
A0A9N7H0Z5
LinkDB
All DBs
Position
1944228..1945538
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AA seq
436 aa
AA seq
DB search
MQLAELKAKTPADLLAYAESLNIENASSLRKQELMFTILKTLADNDQAIYGDGTLEILSD
GFGFLRSPEANYLPGPDDIYISPSQVRRFGLRTGDTVEGQIRAPRDGERYFALLKVNAIN
FEPPEAVRQRINFDNLTPLYPERRLKMEVENSAVGGAEAPAPTGKGKGKTPNRDFTSRVI
DLVSPIGMGQRALIVAPPRTGKTVMLQSIASSISANHPEVFLIVLLIDERPEEVTDMARS
VRGEVVSSTFDEPATRHVQVTEMVLEKAKRLVEHKRDVVILLDSITRLARAYNTVVPSSG
KVLTGGVDANALQRPKRFFGAARNIEEGGSLTIIATALIDTGSRMDEVIFEEFKGTGNSE
LILDRKLADKRTFPAIDITKSGTRKEELLVDRADLAKMWVLRRILAPMGTMDAMDFLLDK
LKYSKTNHDFFDAMNT
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgcaactcgccgaactcaaggccaaaactccagcagaccttctggcttatgctgaaagt
ctgaatattgaaaacgcatcatctcttcgcaagcaggagctgatgttcacgatcctcaag
accctggccgataatgaccaggccatctatggggacggcacgcttgaaatcctgtccgat
ggatttggcttcctccgctcgcccgaggccaattacctgccggggccggatgatatctac
atctctcccagccaggtccgtcgctttggcctgcgcaccggtgatacggtggaaggccag
atccgcgccccgcgtgatggcgagcgctatttcgcgctgctcaaggtcaacgcgatcaat
ttcgagccgcccgaggcggtgcgtcagcgcatcaatttcgacaacctgaccccgctctac
cccgagcggcggctgaagatggaagtcgagaactcagccgtaggcggcgcggaagcaccc
gcccccaccggcaaggggaagggcaagaccccgaaccgcgatttcacctcccgcgtgatc
gaccttgtctcgcccatcggcatgggacagcgcgcgctgatcgtagcccccccgcgcacc
ggcaaaaccgtgatgctgcagagcatcgcctcctccatttctgccaaccaccccgaagtc
ttcctgatcgtactgctgattgacgagcggcccgaggaagtgaccgacatggcgcgctcc
gtgcgcggcgaagtggtttcctccacctttgacgagcccgccacccgccatgtgcaggta
acggaaatggtgctcgagaaggccaagcgccttgtggaacacaagcgcgatgtggtgatc
ctgctggattccatcacgcgtctggcccgtgcctacaacacggtcgtgccctcatcgggc
aaggtgctgaccggtggtgtggacgccaacgcgctacagcgccccaagcgcttcttcggt
gcggcccgtaatatcgaggaagggggatcgctgaccatcatcgccaccgccctgatcgat
accggcagccgcatggatgaggtcatctttgaagagttcaagggcaccggtaactcggaa
ctgatccttgaccgcaagctggccgacaagcggaccttccccgcgatcgacatcaccaag
agtggcacgcgcaaggaagaactgctcgttgaccgtgccgaccttgccaagatgtgggtg
ctgcgccgtatccttgcgccgatgggcacgatggatgcgatggacttcctgctcgacaag
ctgaaatacagcaagaccaaccacgacttcttcgatgcgatgaatacctga
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