KEGG   Kitasatospora hibisci: ACF9IK_11440
Entry
ACF9IK_11440      CDS       T11051                                 
Name
(GenBank) RNA polymerase sigma factor
  KO
K03086  RNA polymerase primary sigma factor
Organism
knb  Kitasatospora hibisci
Pathway
knb02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:knb00001]
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    ACF9IK_11440
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:knb03021]
    ACF9IK_11440
Transcription machinery [BR:knb03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     ACF9IK_11440
SSDB
Motif
Pfam: Sigma70_r3 Sigma70_r2 Sigma70_r4 Sigma70_r1_2 Sigma70_r1_1
Other DBs
NCBI-ProteinID: XIJ53398
LinkDB
Position
complement(2680240..2681895)
AA seq 551 aa
MFVSASTSRSLPPEIAESAALLALIERGKAQGQIAGDDVRQAFEADQIPVTKWKNVMRSL
NQVLIEEGVDLMVSAAEPAGAKRKSVAAKSPTKRTATKAVTTRTPAASSAPTKPPVRIAP
GATVSAPAVAAAAAPVGTVSADITAGEAASAATEVKAAPAKKAAPAKKAAAKKTAAPAKK
AAAKKTTTAKAGKGADEELLGEEELLEDVALPGDKSGTEGDAPEEESEGFVLSDDDEDDA
PAQQVAVAGATADPVKDYLKQIGKVPLLNAEQEVELAKRIEAGLFAEDKLSAADKLAPKL
KRELEIIAEDGRRAKNHLLEANLRLVVSLAKRYTGRGMLFLDLIQEGNLGLIRAVEKFDY
TKGYKFSTYATWWIRQAITRAMADQARTIRIPVHMVEVINKLARVQRQMLQDLGREPTPE
ELAKELDMTPEKVIEVQKYGREPISLHTPLGEDGDSEFGDLIEDSEAVVPADAVSFTLLQ
EQLHSVLDTLSEREAGVVSMRFGLTDGQPKTLDEIGKVYGVTRERIRQIESKTMSKLRHP
SRSQVLRDYLD
NT seq 1656 nt   +upstreamnt  +downstreamnt
ttgttcgtgtcggccagcacatcccgttcgcttccccccgagatcgccgagtccgcggca
ctgctggcgctcatcgagcggggcaaggcccaggggcagatcgccggtgacgacgtgcgc
caggcgttcgaggcggaccagatcccggtcaccaagtggaagaacgtcatgcgcagcctc
aaccaggtgctgattgaggagggggtggacctcatggtcagcgcggccgagccggccggc
gccaagcgcaagagcgttgcggccaagagccccaccaagcgcaccgccaccaaggcggtc
accacccggaccccggccgcgtcgtcggccccgaccaagccccccgtgcggatcgcgccc
ggcgccaccgtctccgccccggcggtcgcggccgctgcggccccggtcggcacggtgtcc
gccgacatcaccgccggagaggcggcctcggccgccaccgaggtgaaggcggcgccggcg
aagaaggccgccccggcgaagaaggccgcggccaagaagaccgccgccccggccaagaag
gccgcggccaagaagaccaccaccgccaaggccggcaagggtgcggacgaggagctgctc
ggcgaggaggagctgcttgaggacgtggccctgcccggtgacaagtccggcaccgagggc
gacgccccggaggaggagtcggagggcttcgtcctctccgacgacgacgaggacgacgcg
ccggcccagcaggtcgccgtcgccggtgccaccgccgacccggtcaaggactacctgaag
cagatcggcaaggtcccgctgctcaatgccgagcaggaggtcgagctcgccaagcgcatc
gaggccggtctgttcgccgaggacaagctctcggccgccgacaagctggcgccgaagctc
aagcgcgagctggagatcatcgccgaggacggccgccgggccaagaaccacctgctggag
gccaacctccgcctggtggtctcgctggccaagcgctacaccggccgcggcatgctcttc
ctggacctgatccaggagggcaacctcggcctgatccgtgcggtcgagaagttcgactac
accaagggttacaagttctcgacctacgcgacgtggtggatccgtcaggcgatcacccga
gccatggccgaccaggcccgcaccatccgtatcccggtgcacatggtcgaggtcatcaac
aagctggcccgcgtccagcgccagatgctccaggacctgggccgcgagcccaccccggag
gagctggccaaggagctcgacatgacccccgagaaggtcatcgaggtccagaagtacggc
cgtgagcccatctcgctgcacaccccgctgggtgaggacggcgacagcgagttcggtgac
ctgatcgaggactccgaggcggtcgtcccggccgacgcggtctccttcacgctgctccag
gagcagctgcactcggtactggacaccctgtccgagcgcgaggccggcgtcgtctcgatg
cgcttcggtctgacggacggtcagccgaagacgctggacgagatcggcaaggtgtacggg
gtcacccgtgagcgcatccgccagatcgagtccaagaccatgtcgaagctgcgccacccg
tcgcggtcccaggtgctgcgcgactacctggactga

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