Kitasatospora hibisci: ACF9IK_11440
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Entry
ACF9IK_11440 CDS
T11051
Name
(GenBank) RNA polymerase sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
knb Kitasatospora hibisci
Pathway
knb02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
knb00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
ACF9IK_11440
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
knb03021
]
ACF9IK_11440
Transcription machinery [BR:
knb03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
ACF9IK_11440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r1_1
Motif
Other DBs
NCBI-ProteinID:
XIJ53398
LinkDB
All DBs
Position
complement(2680240..2681895)
Genome browser
AA seq
551 aa
AA seq
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MFVSASTSRSLPPEIAESAALLALIERGKAQGQIAGDDVRQAFEADQIPVTKWKNVMRSL
NQVLIEEGVDLMVSAAEPAGAKRKSVAAKSPTKRTATKAVTTRTPAASSAPTKPPVRIAP
GATVSAPAVAAAAAPVGTVSADITAGEAASAATEVKAAPAKKAAPAKKAAAKKTAAPAKK
AAAKKTTTAKAGKGADEELLGEEELLEDVALPGDKSGTEGDAPEEESEGFVLSDDDEDDA
PAQQVAVAGATADPVKDYLKQIGKVPLLNAEQEVELAKRIEAGLFAEDKLSAADKLAPKL
KRELEIIAEDGRRAKNHLLEANLRLVVSLAKRYTGRGMLFLDLIQEGNLGLIRAVEKFDY
TKGYKFSTYATWWIRQAITRAMADQARTIRIPVHMVEVINKLARVQRQMLQDLGREPTPE
ELAKELDMTPEKVIEVQKYGREPISLHTPLGEDGDSEFGDLIEDSEAVVPADAVSFTLLQ
EQLHSVLDTLSEREAGVVSMRFGLTDGQPKTLDEIGKVYGVTRERIRQIESKTMSKLRHP
SRSQVLRDYLD
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
ttgttcgtgtcggccagcacatcccgttcgcttccccccgagatcgccgagtccgcggca
ctgctggcgctcatcgagcggggcaaggcccaggggcagatcgccggtgacgacgtgcgc
caggcgttcgaggcggaccagatcccggtcaccaagtggaagaacgtcatgcgcagcctc
aaccaggtgctgattgaggagggggtggacctcatggtcagcgcggccgagccggccggc
gccaagcgcaagagcgttgcggccaagagccccaccaagcgcaccgccaccaaggcggtc
accacccggaccccggccgcgtcgtcggccccgaccaagccccccgtgcggatcgcgccc
ggcgccaccgtctccgccccggcggtcgcggccgctgcggccccggtcggcacggtgtcc
gccgacatcaccgccggagaggcggcctcggccgccaccgaggtgaaggcggcgccggcg
aagaaggccgccccggcgaagaaggccgcggccaagaagaccgccgccccggccaagaag
gccgcggccaagaagaccaccaccgccaaggccggcaagggtgcggacgaggagctgctc
ggcgaggaggagctgcttgaggacgtggccctgcccggtgacaagtccggcaccgagggc
gacgccccggaggaggagtcggagggcttcgtcctctccgacgacgacgaggacgacgcg
ccggcccagcaggtcgccgtcgccggtgccaccgccgacccggtcaaggactacctgaag
cagatcggcaaggtcccgctgctcaatgccgagcaggaggtcgagctcgccaagcgcatc
gaggccggtctgttcgccgaggacaagctctcggccgccgacaagctggcgccgaagctc
aagcgcgagctggagatcatcgccgaggacggccgccgggccaagaaccacctgctggag
gccaacctccgcctggtggtctcgctggccaagcgctacaccggccgcggcatgctcttc
ctggacctgatccaggagggcaacctcggcctgatccgtgcggtcgagaagttcgactac
accaagggttacaagttctcgacctacgcgacgtggtggatccgtcaggcgatcacccga
gccatggccgaccaggcccgcaccatccgtatcccggtgcacatggtcgaggtcatcaac
aagctggcccgcgtccagcgccagatgctccaggacctgggccgcgagcccaccccggag
gagctggccaaggagctcgacatgacccccgagaaggtcatcgaggtccagaagtacggc
cgtgagcccatctcgctgcacaccccgctgggtgaggacggcgacagcgagttcggtgac
ctgatcgaggactccgaggcggtcgtcccggccgacgcggtctccttcacgctgctccag
gagcagctgcactcggtactggacaccctgtccgagcgcgaggccggcgtcgtctcgatg
cgcttcggtctgacggacggtcagccgaagacgctggacgagatcggcaaggtgtacggg
gtcacccgtgagcgcatccgccagatcgagtccaagaccatgtcgaagctgcgccacccg
tcgcggtcccaggtgctgcgcgactacctggactga
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