Kitasatospora hibisci: ACF9IK_11710
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Entry
ACF9IK_11710 CDS
T11051
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
knb Kitasatospora hibisci
Pathway
knb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
knb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACF9IK_11710 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
knb03019
]
ACF9IK_11710 (rny)
Messenger RNA biogenesis [BR:
knb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
ACF9IK_11710 (rny)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_KhpA-B
Golgin_A5
DUF2518
DUF7669
Motif
Other DBs
NCBI-ProteinID:
XIJ53449
LinkDB
All DBs
Position
complement(2753690..2755144)
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AA seq
484 aa
AA seq
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MRIALSTGSVTSLLSAVALIAVVTAAWLMVRRLQAAQRRAAAETERARRWAEGQAAQLRA
ELDRREERLTEELRRLDLREGELAERTADVARARGEADELLRRREAELERTAGLSADQAR
AQLVREAEAQARREAAVTVREIERTAKEEGEERARTIVAGAIQRLAAAQTAETAVSVFRL
PNEEMKGRIIGREGRNIRSFEAVTGVNLIIDDTPASVQLSCFDPVRRETARLTLEQLVED
GRIHPLRIEHVHERSREEVERRCVRAGEDALLAVRVGGMHPELVRTLGTLRYRASYGQNV
LGHLVESAHLAGMMAAELGVDPEPARRAALLHDIGKAMTHEVDGSHAAIGAECARRFGES
EDVVHAIAAHHGEVEPQTVEAVLVQAADACSGGRPGARKESLEVYVRRLERLEEIARAHE
GVAAVYAMQAGREVRVMVRPEVVDDLGAQVIAREVAKQVSEELTYPGQIRVTVVRESRVT
EVAR
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgaggatcgcgctgagcaccggatcggtcacctccctgctgtcggcggtggcgttgatc
gccgtcgtgacggcggcctggctgatggtccggcggctccaggcggcgcagcggcgcgcc
gcggccgagaccgagcgggcccggcggtgggccgagggtcaggccgcccagttgcgggcc
gaactcgaccggcgcgaggagcggttgaccgaggagctgcgccgactggacctccgcgag
ggcgaactcgccgagcggaccgccgacgtggcgcgggcccggggcgaggccgacgaactt
ctgcggcgccgggaggcggagctggagcgcaccgccgggctctcggccgaccaggcacgg
gcccagctcgtccgggaggccgaggcacaggcccggcgggaggcggccgtcacggtccgg
gagatcgagcggaccgccaaggaggagggcgaggagcgggcccggacgatcgtcgccggg
gcgatccagcggctggcggccgcgcagaccgccgagaccgcggtgtcggtgttccggctg
cccaacgaggagatgaagggccggatcatcggccgcgagggccgcaacatccgcagcttc
gaggcggtcaccggcgtcaacctgatcatcgacgacaccccggcctcggtgcagctgtcc
tgcttcgacccggttcgccgggagaccgcccggctcaccctggaacagctggtcgaggac
ggccgcatccatccgctgcggatcgagcacgtccacgagcgcagccgcgaggaggtcgag
cggcggtgcgtccgggccggcgaggacgcgctgctggcggtacgggtcggcgggatgcac
ccggagctggtccgcaccctcggcaccctgcgctaccgggcctcgtacgggcagaacgtg
ctggggcacctggtggagtcggcgcacctggccgggatgatggcggccgaactcggggtg
gacccggagccggcgcggcgtgcggcactcctgcacgacatcggcaaggcgatgacgcac
gaggtcgacggcagccacgcggcgatcggggcggagtgcgcccggcggttcggcgagtcg
gaggatgtggtgcacgcgatcgccgcgcaccacggcgaggtggagccacagacggtcgag
gcggtgctggtccaggcggcggacgcgtgttcgggcggccggccgggggcccgcaaggag
tcgctggaggtctacgtccgccggttggagcggctggaggagatcgcccgggcacacgag
ggggtggccgcggtgtacgcgatgcaggccggccgtgaggtgcgggtgatggtgcgcccg
gaggtggtggacgatctcggtgcgcaggtgatcgcccgcgaggtcgccaagcaggtgtcg
gaggagctgacctacccgggccagatccgggtgacggtggtccgggagagccgggtcacc
gaggtggcccgctag
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