Kitasatospora hibisci: ACF9IK_12105
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Entry
ACF9IK_12105 CDS
T11051
Symbol
mutM
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
knb Kitasatospora hibisci
Pathway
knb03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
knb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ACF9IK_12105 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
knb03400
]
ACF9IK_12105 (mutM)
Enzymes [BR:
knb01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
ACF9IK_12105 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
ACF9IK_12105 (mutM)
DNA repair and recombination proteins [BR:
knb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
ACF9IK_12105 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
DUF7573
DZR
Motif
Other DBs
NCBI-ProteinID:
XIJ53519
LinkDB
All DBs
Position
complement(2857730..2858629)
Genome browser
AA seq
299 aa
AA seq
DB search
MPELPEVEVVRRGLANWVAGRTVAGVDVLHPRAVRRQPAGAADFAARLTGTVLGPAQRRG
KYLWLPLAGSGAGFSLIGHLGMSGQLLVQDPAVPDETHLRVRLRFTDGGRELRFVDQRTF
GGLAVEEAEPDDPEGTPVSIAHIARDPLDRRFDDAAFVAALRTRRTTVKRALLDQTLISG
VGNIYADEALWRSRLHYDRPTASLTRPQAALLLASARDVMTAALAVGGTSFDSLYVNVNG
ESGYFSRDLDAYGREAEPCRRCGTAIRRAAWMNRSSYFCPRCQRIPRARSGSRAPLSSS
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
gtgcctgaactccccgaggtagaggtcgtccgccgtggcctggccaactgggtcgccggg
cggacggtggccggtgtcgacgtgctgcacccgcgtgcggtgcgccgccagccagccggg
gcggcggacttcgccgcccggctcaccggcaccgtgctcggccccgcgcagcgccgcggc
aagtacctctggctgccgctggccggctccggggcgggcttctcgctgatcggccacctc
gggatgagcggccagctcctcgtgcaggaccccgcggtgccggacgagacccacctgcgg
gtgcggctgcggttcaccgacggcgggcgcgaactgcgcttcgtcgaccagcggaccttc
ggcggcctggcggtcgaggaggccgagccggacgaccccgagggcacgccggtctccatc
gcgcacatcgcccgtgacccgctcgaccggcgattcgacgacgccgcgttcgtggccgcg
ctgcggacgaggcgcaccacggtcaagcgggccctgctggaccagaccctgatcagcggc
gtgggcaacatctacgcggacgaggcgctctggcgctcccggctgcactacgaccgcccg
accgcctcgctgacccgcccgcaggccgcgctcctgctggccagcgcccgggacgtgatg
accgcggccctggccgtcggcggcaccagtttcgacagcctctacgtcaacgtgaacggc
gagagcggctacttctcccgcgacctggacgcctacggccgggaggcggagccgtgccgc
cgctgcggcacggcgatccggcgggccgcctggatgaaccggtccagctacttctgcccc
cgctgccagcgcatcccgcgcgcccgcagcgggagccgggcaccgctcagctcttcgtga
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