Kitasatospora hibisci: ACF9IK_13600
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Entry
ACF9IK_13600 CDS
T11051
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
knb Kitasatospora hibisci
Pathway
knb03420
Nucleotide excision repair
knb03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
knb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ACF9IK_13600
03430 Mismatch repair
ACF9IK_13600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
knb03400
]
ACF9IK_13600
Enzymes [BR:
knb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ACF9IK_13600
DNA repair and recombination proteins [BR:
knb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ACF9IK_13600
MMR (mismatch excision repair)
Other MMR factors
ACF9IK_13600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
XIJ53783
LinkDB
All DBs
Position
complement(3204743..3207970)
Genome browser
AA seq
1075 aa
AA seq
DB search
MTAVLSHPDQLKELLGIPFNREQMAAIGAPLEPAVIVAGAGSGKTTVMAARVVWLVGSGA
VAPAEVLGLTFTNKAAAELAERVRSALLRAGIAEADGEPLGAPEISTYHAFAGRLLKEHG
LRIGIEPDVRLLADATRFQLAAKVLRTARGPFPALTGTFANLVADLTALDGELAEHLVEP
DALRAFDEELLDTLATARLTNEDLRAVPGAARARLELLRLVEEYRRRKAAAGLMDFGDQI
AAAARLAQQRPEVGELLRDQFKVVLLDEYQDTSVAQRLMLAGLFGAGPDGRGSGHPVTAV
GDPCQAIYGWRGASVANLDEFPRHFPRAGGSPAARYALSENRRSGGRLLAFANGLAAPLR
AMHEGVEALRPAPGAEQDGYVRAALLPTHAEEVDWLADSIAHLVATGTAPGRIAVLCRGG
AAFPDIHAALVARDVPVEVVGLGGLLQLPEVADLVAVCEVLQDPTANAALVRLLIGPRWR
IGPRDLALLGRRAAELVRTDRPEGVEALAAAVAETDPTEVVSLADALETFLTAPTGPDGA
QPGDLPFSPEARSRFARLAQELRELRRSLAEPLMDVLHRVLAVTGLEIELAASPKALAAR
RRETLHAFLDVAAGFADLDGDPGLAAFLGFLRAAQEYERGLDSSLPGGEDTVKVLTAHKS
KGLEWDVVAVPGLVRGAFPSSTARERWTSTKRVLPHALRGDAATLPDVRGGWNAKSMAAF
KQALAEHSGTEELRLGYVAFTRPRSLLLASGHWWGPSQKTPRGPSAFLEQLREHCEQPGA
GEVEHWAEPPEKGAGNPALAAPVERPWPLPLDPAAQHARRRVAEVVHRRLAGRPAPEPEP
MAAEDRRLVESWDRDLTALLGELARSRRSVRDVPLPATLSATQLMRLAADPDGFAQDLAR
PMPRPPQPAARRGTRFHAWVQSRIEPLLLVEPGALPGADDDGIEDEQDLERLKEAFLRTP
YAHRTPYRVEAPFQLVLAGRVVRGRIDAVYRDGDVGSEFGGASRYEVVDWKTHREETADP
LQLAVYRVAWAEQLGVPLEQVTASFLYVRSGRVEQPAGLPDRKKLERLLIGNSEE
NT seq
3228 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgccgtgctcagccatcccgaccagctcaaggagctgctcggcatccccttcaac
cgggagcagatggcggccatcggcgccccgctggagccggccgtgatcgtggccggcgcc
ggctccggcaagaccaccgtgatggccgcccgggtggtctggctggtcggctccggcgcg
gtggcccccgcggaggtgctcggcctcaccttcaccaacaaggccgccgccgagctcgcc
gaacgcgtccgctcggccctgctgcgagcgggaatcgccgaggcggacggggagccgctc
ggcgccccggagatctccacctaccacgccttcgccggccgcctcctcaaggagcacggc
ctgcggatcggcatcgaacccgacgtgcggctgctcgccgacgccacccggttccagctc
gccgccaaggtgctgcgcaccgctcgcggcccgttcccggccctcaccggaaccttcgcc
aacctggtcgccgacctgacggcgctggacggcgagctcgccgagcacctggtcgagccg
gacgcgctgcgcgccttcgacgaggaactgctcgacaccctggccacggccaggctcacc
aacgaggacctgcgggccgtccccggtgccgcccgggcccggctggagctgctccgcctg
gtcgaggagtaccggcgccgcaaggccgccgccggactgatggacttcggcgaccagata
gccgccgccgcccggctcgcccagcagcgccccgaggtcggcgagctgctgcgggaccag
ttcaaggtggtgctgctcgacgagtaccaggacacctcggtcgcccagcggttgatgctg
gccgggcttttcggcgcgggcccggacgggcgggggagcggccacccggtgaccgccgtc
ggcgacccgtgccaggcgatctacggctggcgcggcgcctcggtggccaacctggacgag
ttcccccggcacttcccgcgggccggcggcagccccgccgcccggtacgcgctgagcgag
aaccgccgcagcggcgggcggctgctcgcgttcgccaacgggctggccgccccgctgcgc
gccatgcacgagggcgtcgaggcgctgcgcccggccccgggggccgagcaggacggctac
gtccgggccgcgctgctgccgacccacgccgaggaggtcgactggctggccgattcgatc
gcccacctggtcgccaccggcaccgcccccggccggatcgccgtgctctgccgcggcggc
gcggccttccccgacatccacgcggcgctggtcgcccgggacgtgccggtcgaggtggtc
ggcctcggcgggctgctccagctgcccgaggtggcggacctggtggcggtctgcgaggtg
ctccaggacccgaccgccaacgccgcgctggtccggttgctgatcggtccgcgctggcgg
atcggcccgcgcgacctcgccctgctcggtcgccgcgccgccgagctggtccgcaccgac
cggccggagggcgtcgaggcgctggccgccgccgtcgccgagacggacccgaccgaggtg
gtctcgctggccgacgcgctggagaccttcctgaccgccccgaccggaccggacggggcg
cagcccggcgacctgccgttctcgcccgaggcccggtcgcgcttcgcccggctcgcccag
gagctgcgcgagctgcgccgctcgctcgccgagccgctgatggacgtgctgcaccgggtg
ctcgccgtcaccggcctggagatcgaactcgccgcctccccaaaggcgttggccgcccgc
cggcgggagaccctgcacgccttcctggacgtcgcggccggcttcgccgacctggacggc
gatccgggcctcgcggccttcctcggcttcctgcgtgccgcccaggagtacgagcgcggc
ctggacagcagcctgcccggcggcgaggacaccgtgaaggtgctcaccgcgcacaagtcc
aaggggctggagtgggacgtggtcgccgttcccggcctggtacggggcgcgttcccgtcc
tcgaccgcgcgcgagcgctggaccagcaccaagcgggtgctcccgcacgccctgcgcggc
gacgcggccaccctgcccgacgtccgcggcggctggaacgccaagtcgatggcggctttc
aaacaggcgctcgccgagcactccggcaccgaggagttgcggctcggctacgtcgccttc
acccggccgcgctcgctgctgctcgcctccgggcactggtggggcccgagccagaagacc
ccgcgcggcccgtccgcgttcctggagcagctgcgggagcactgcgagcagcccggcgcg
ggcgaggtcgagcactgggccgagccgccggagaagggcgccgggaacccggccctggcc
gcgccggtcgagcggccgtggccgctgccgctggacccggccgcccagcacgcccgccgc
cgggtcgccgaggtggtgcaccggcgcctcgccgggcggcccgcgcccgagccggagccg
atggccgccgaggaccgccgcctggtggagtcctgggaccgcgacctgacggcgctgctc
ggcgagctcgcgcgctcccggcgcagtgtccgggacgtaccgctgccggcgaccctctcc
gccacccagctgatgaggctggccgccgatccggacggcttcgcgcaggacctcgcccgc
ccgatgcctcgcccgccgcagcccgcggcccgccggggcacccgcttccacgcctgggtg
cagtcccggatcgagccgctgctgctggtcgagccgggggcgctgcccggcgccgacgac
gacggcatcgaggacgagcaggacctcgaacggctcaaggaggcgttcctgcgcaccccg
tacgcgcaccggacgccctaccgggtggaggcgccgttccagctggtgctggcgggccgg
gtggtgcgcggccggatcgacgcggtctaccgggacggtgacgtcgggtcagaattcggc
ggcgcgtcacgctacgaagtggtggactggaagacgcatcgcgaggagaccgccgatccg
ctccagctcgcggtctaccgggtcgcctgggccgaacagttgggcgttccgctggagcag
gtcaccgcgtcgttcctgtacgtccgcagcggccgggtcgaacaacccgcaggacttccc
gaccgaaagaagttggaacggctcctgatcgggaacagtgaagaatga
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