Kitasatospora hibisci: ACF9IK_23895
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Entry
ACF9IK_23895 CDS
T11051
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
knb Kitasatospora hibisci
Brite
KEGG Orthology (KO) [BR:
knb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
knb03016
]
ACF9IK_23895 (truB)
Enzymes [BR:
knb01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
ACF9IK_23895 (truB)
Transfer RNA biogenesis [BR:
knb03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
ACF9IK_23895 (truB)
Prokaryotic type
ACF9IK_23895 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
PseudoU_synth_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
XIJ55631
LinkDB
All DBs
Position
5454134..5455063
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AA seq
309 aa
AA seq
DB search
MKRKGTGPDGLVIVDKPEGITSHGVVAKLRWLAGTRKVGHAGTLDPMATGVLVIGVERAT
RLLGHLMLTAKTYEATVRLGQTTVTDDREGEVTSSTAADGVTREAVEAGIALLTGEIMQV
PSKVSAIKIDGKRSYARVREGEDFELAARPTTVHSFTVHEYRTAVAEDGTPVLDLDVTVE
CSSGTYIRALARDLGAGLGVGGHLTALRRTKVGPYGVESARTLEQLEESVHGEAATGLDV
LPIGAAAAAAFPRWDLDAEQAKLLSHGARLKAPGLGVDGPIAVFGPDDRFLALVEEKGGQ
AKPVAVFVG
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgcaaaggaaccggtccggacggcctggtcatcgtcgacaagccggagggcatc
acctcgcacggggtggtggccaagctgcgctggctggccgggacgcggaaggtcggccac
gccggcacgctcgatccgatggccaccggcgtgctggtgatcggcgtcgagcgggccacc
cggctgctcggccacctgatgctcaccgccaagacgtacgaggcgaccgtccggctggga
cagaccaccgtcaccgacgaccgggagggtgaggtcacctcctcgacggcggcggacggc
gtcaccagggaggccgtcgaggccgggatcgccctgctcaccggcgagatcatgcaggtg
ccgtccaaggtcagcgcgatcaagatcgacggcaagcgctcctacgcgcgggtccgcgag
ggcgaggacttcgagctcgctgcgcggccgaccaccgtgcactccttcaccgtgcacgag
taccgcaccgccgtcgccgaggacggcacgccggtgctcgacctcgacgtgacggtggag
tgctcctccggcacctacatccgggcgctcgcccgcgacctcggcgccggcctcggcgtc
ggcggccacctcaccgcgctgcggcgcaccaaggtcggcccgtacggcgtggagtcggcg
cggacgctggagcagctggaggagtcggtgcacggcgaggccgcgaccggcctggacgtg
ctgccgatcggcgcggccgcggcggcggccttcccccgctgggacctcgacgccgagcag
gccaagctgctctcgcacggcgcccggctgaaggcgccggggctgggcgtggacgggccg
atcgcggtgttcgggccggacgaccggttcctcgcactggtggaggagaagggcggccag
gcgaagccggtcgcggtcttcgtcggctga
DBGET
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