Kitasatospora hibisci: ACF9IK_28095
Help
Entry
ACF9IK_28095 CDS
T11051
Name
(GenBank) DEAD/DEAH box helicase
KO
K03727
ATP-dependent RNA helicase HelY [EC:
5.6.2.6
]
Organism
knb Kitasatospora hibisci
Brite
KEGG Orthology (KO) [BR:
knb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
knb03019
]
ACF9IK_28095
Enzymes [BR:
knb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
ACF9IK_28095
Messenger RNA biogenesis [BR:
knb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
ACF9IK_28095
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DSHCT
SH3_HelY
DEAD
ResIII
Helicase_C
DEXQc_Suv3
MTR4-like_stalk
AAA_22
nSTAND_NTPase5
Motif
Other DBs
NCBI-ProteinID:
XIJ58352
LinkDB
All DBs
Position
6400921..6403776
Genome browser
AA seq
951 aa
AA seq
DB search
MNTPLPEHPEERELNPAEAYAAFRRRAKEQATALYGFQQLYDFPLDEFQIEACQALEAGE
GVLVAAPTGSGKTIVGEFAVHLALQAGRKCFYTTPIKALSNQKYGDLVKRYGAAKVGLLT
GDNTVNGDAPVVVMTTEVLRNMLYAGSSTLNGLGYVVMDEVHYLADRFRGAVWEEVIIHL
PESVTLVSLSATVSNAEEFGDWLDTVRGGTKVIVSEHRPVPLWQHVMAGNRMYDLFANPD
RDGRPKDAPRNPAKLVNPELVRLARSELDRNPRDRFGRGRGRSMPNGRPGRVWTPGRVDV
IDRLDAEGLLPAITFIFSRAGCEAAVQQCLSSGLRLNKEEDRAKVRAIVEERCADIPDED
LHVLGYFEWLDGLERGIAAHHAGMLPRFKEVVEELFVKGLVKAVFATETLALGINMPARS
VVMEKLVKWNGETHADITPGEYTQLTGRAGRRGIDVEGHAVVLWQRGLDPEALAGLAGTR
TYPLRSSFRPSYNMAVNLVSQFGRHRSRELLETSFAQFQADRSVVGIARQVQRNEEGLEG
YRASMTCHLGDFDEYMELRRRLKDRENELAREGTSQRRAAAVESIEQLKPGDVIHVPTGK
FAGLALVLDPGLPPVSRNGRVGTRHPDYQDGPRPVVLTAERQVKRLAMIDFPHPVAAIER
VRIPKSFNPRSPQSRRDLASALRTKAGHLEPERFRRGRAAAADDPEITRLRVELRQHPCH
GCDEREDHARWAERYHRLHRDTELLERRMRSRTHTIARTFDRVCALLADLGYLRGDTVTD
DGKRLGRLYGELDLLASECIREGVWNGLAAAELAACASALVYEARQSDDAAAPRVPEGRA
KEALGQMVRIWGHLDALEEQHRINTAEGVGQREPDLGFAWVAYRWALGHNLDQVLRDADM
PAGDFVRWTKQLIDVLGQIQDAAGEDAELRKTARKAIDGMRRGIIAYSSVG
NT seq
2856 nt
NT seq
+upstream
nt +downstream
nt
atgaacacccctctgcccgagcaccccgaggagcgggagctcaaccccgccgaggcgtac
gcggctttccgccgccgggccaaggagcaggccaccgccctctacggcttccagcagctc
tacgacttcccactggacgagttccagatcgaggcctgccaggcgctggaggcgggcgag
ggcgtcctggtcgccgccccgaccggctccggcaagaccatcgtcggcgagttcgccgtc
cacctggccctgcaggccgggcggaagtgcttctacaccacgccgatcaaggcgctctcc
aaccagaagtacggcgacctggtcaagcgctacggcgccgccaaggtcggcctgctgacc
ggtgacaacacggtcaacggcgacgcgcccgtggtggtgatgaccaccgaggtgctgcgc
aacatgctctacgcgggctccagcaccctgaacggcctcggctacgtggtcatggacgag
gtgcactacctcgccgaccgcttccgcggcgccgtctgggaggaggtcatcatccacctc
cccgagtccgtcaccctggtctcgctctccgccaccgtctccaacgccgaggagttcggc
gactggctggacaccgtgcgcggcggcaccaaggtgatcgtctccgagcaccggccggtg
ccgctctggcagcacgtgatggccggcaaccggatgtacgacctgttcgccaaccccgac
cgcgacggccgccccaaggacgccccgcgcaacccggccaagctggtgaaccccgagctg
gtccggctggcccgctccgagctggaccgcaacccgcgcgacaggttcggccgcggccgc
ggccgctccatgcccaacggccgccccggccgggtctggacgccgggccgggtcgacgtc
atcgaccgcctggacgccgagggcctgctgcccgcgatcaccttcatcttcagccgggcc
ggctgcgaggccgccgtccagcagtgcctctcctccggcctgaggctcaacaaggaggag
gaccgcgccaaggtgcgcgcgatcgtcgaggagcgctgcgccgacatcccggacgaggac
ctgcacgtcctcggctacttcgagtggttggacgggctggagcgcggcatcgccgcccac
cacgccggcatgctgccgcgcttcaaggaggtggtcgaggagctcttcgtgaaggggctg
gtcaaggccgtcttcgcgaccgagaccctcgcgctcgggatcaacatgcccgcccgctcg
gtggtcatggagaagctggtcaagtggaacggcgagacccacgccgacatcacccccggc
gagtacacccagctcaccggccgggccggtcggcgcggcatcgacgtcgagggccacgcc
gtggtgctctggcagcggggcctcgacccggaggcgctggccggcctggccggaacccgt
acctacccgctgcggtcctcgttccggccctcgtacaacatggccgtcaacctggtctcg
cagttcggccggcaccgctcccgcgagctgctggagacgtcgttcgcgcagttccaggcc
gaccgctcggtggtcggcatcgcccgccaggtccagcgcaacgaggaggggctggagggc
taccgcgcgtcgatgacctgccacctcggcgacttcgacgagtacatggagctgcggcgc
cggctcaaggaccgcgagaacgagctcgcccgtgagggcaccagccagcgccgggccgcc
gccgtcgagtccatcgagcagctcaagccgggcgacgtcatccacgtccccaccggcaag
ttcgccggcctcgccctcgtcctcgacccgggcctgccgccggtcagccgcaacggccgg
gtcggcacgcgccacccggactaccaggacgggccgcgcccggtggtgctcaccgccgag
cggcaggtcaagcggctcgccatgatcgacttcccgcacccggtcgccgccatcgagcgg
gtgcgtatcccgaagtccttcaacccgcgcagcccgcagtcccggcgcgacctcgcctcg
gcgctgcgcaccaaggccggacacctggagcccgagcggttccggcgcggccgcgcggcc
gcggccgacgacccggagatcacccggctccgcgtcgagctgcgccagcacccgtgccac
ggctgcgacgagcgcgaggaccacgcccgctgggccgagcgctaccaccggctgcaccgc
gacaccgagctgctggagcgccggatgcgctcccggacccacaccatcgcccgcaccttc
gaccgggtctgcgccctgctcgccgacctcggctatctgcgcggcgacaccgtcaccgac
gacggcaagcgcctcggccgcctctacggcgagctcgacctgctcgcctcggagtgcatt
cgcgagggcgtctggaacggcctggccgcggccgaactggccgcctgcgcctcggcgctg
gtctacgaggcccggcagtcggacgacgcggccgccccccgggtgcccgagggcagggcc
aaggaggcgctcggccagatggtccggatctggggccacctcgacgccctggaggagcag
caccggatcaacaccgccgagggcgtcggccagcgcgagcccgacctcggcttcgcctgg
gtcgcctaccgctgggcactcggccacaacctggaccaggtgctgcgcgacgccgacatg
ccggccggcgacttcgtccgctggaccaagcaactgatcgacgtcctcggccagatccag
gacgcggccggcgaggacgccgaactgcgcaagaccgcccgcaaggcgatcgacggcatg
cgccgcggcatcatcgcctactcctccgtcggctga
DBGET
integrated database retrieval system
