Kitasatospora hibisci: ACF9IK_30945
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Entry
ACF9IK_30945 CDS
T11051
Name
(GenBank) Fpg/Nei family DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
knb Kitasatospora hibisci
Pathway
knb03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
knb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ACF9IK_30945
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
knb03400
]
ACF9IK_30945
Enzymes [BR:
knb01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
ACF9IK_30945
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
ACF9IK_30945
DNA repair and recombination proteins [BR:
knb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
ACF9IK_30945
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
zf-FPG_IleRS
Zn_ribbon_TFIIB
NFACT_N
Motif
Other DBs
NCBI-ProteinID:
XIJ56927
LinkDB
All DBs
Position
7079398..7080267
Genome browser
AA seq
289 aa
AA seq
DB search
MPELPEVEALAAFLSERLSGREIARVQPVAISALKTYDPPVTALEGRVVGPVTRHGKFLD
VEAGGLHLVVHLARAGWLRWKDHLPEEPPRPSAKSPLALRVRLAGEAGDGFDLTEAGTRK
GLAVYVVQDAGQVPGVARLGPDPLDPGFTQADFAALLQGERRRLKGVLRDQSVLAGVGNA
YSDEVLHAARMSPYKQASSLSEDETARLYGALVGTLREAVERSRGLAAGELKTEKKLGLR
VHGRTGQPCPLCGDTVREVSFADSSLQYCPTCQTGGRPLADRRLSRLLK
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgccggagctgcccgaggtcgaggctctcgccgccttcctgtccgagcggctgtccggg
cgggagatcgcccgggtgcagccggtggcgatcagcgcgctcaagacctacgacccgccg
gtgacggcgctcgaaggccgggtggtcggcccggtgacccggcacggcaagttcctggac
gtcgaggccggcggcctccacctggtcgtccacctggcccgggccggctggctgcgctgg
aaggaccacctgcccgaggagccgccgcggccgagcgcgaagagcccgctcgccctgcgg
gtgcggctggccggggaggccggcgacggattcgacctcaccgaggccgggaccaggaag
ggcctggccgtgtacgtggttcaggacgccgggcaggtgcccggcgtcgcccggctcggt
cccgacccgctggacccggggttcacgcaggcggacttcgccgccctgctgcagggcgag
cggcgccgcctcaagggcgtgctgcgggaccagagtgtgctggccggggtcgggaacgcc
tactcggacgaggtgctgcacgcggcgcggatgtccccgtacaagcaggcgtcgagcctg
agcgaggacgagacggcccggctctacggggcgctggtcggcacgctgcgtgaggcggtc
gagcgctcccgcgggctcgcggcgggggagctgaagaccgagaagaagctcggcctgcgg
gtgcacggtcgcaccgggcagccgtgcccgctctgcggggacaccgtgcgtgaggtgtcc
ttcgcggactcctcgctgcagtactgcccgacctgccagaccggcggcaggccgctggcc
gaccgccggctctcccggctgctgaagtag
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