Kwoniella newhampshirensis: 92178647
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Entry
92178647 CDS
T10314
Symbol
IAR55_001388
Name
(RefSeq) hypothetical protein
KO
K10756
replication factor C subunit 3/5
Organism
kne Kwoniella newhampshirensis
Pathway
kne03030
DNA replication
kne03410
Base excision repair
kne03420
Nucleotide excision repair
kne03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
kne00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
92178647 (IAR55_001388)
03410 Base excision repair
92178647 (IAR55_001388)
03420 Nucleotide excision repair
92178647 (IAR55_001388)
03430 Mismatch repair
92178647 (IAR55_001388)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
kne03032
]
92178647 (IAR55_001388)
03036 Chromosome and associated proteins [BR:
kne03036
]
92178647 (IAR55_001388)
03400 DNA repair and recombination proteins [BR:
kne03400
]
92178647 (IAR55_001388)
DNA replication proteins [BR:
kne03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
92178647 (IAR55_001388)
DNA Replication Termination Factors
ELG1-RFC complex
92178647 (IAR55_001388)
Chromosome and associated proteins [BR:
kne03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
92178647 (IAR55_001388)
DNA repair and recombination proteins [BR:
kne03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
92178647 (IAR55_001388)
Check point factors
HRAD17(Rad24)-RFC complex
92178647 (IAR55_001388)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
Rad17
AAA_14
DUF815
AAA_16
AAA_11
RCF1-5-like_lid
AAA_assoc_2
AAA_22
AAA_5
AAA_30
RuvB_N
AAA_3
AAA_24
AAA_19
DEAD
AAA_28
AAA_18
ATPase_2
Mg_chelatase
ResIII
AAA_25
bpMoxR
nSTAND3
Fe-S_biosyn
AAA_7
Viral_helicase1
TIP49
RNA_helicase
AAA_33
Motif
Other DBs
NCBI-GeneID:
92178647
NCBI-ProteinID:
XP_066804438
UniProt:
A0AAW0Z224
LinkDB
All DBs
Position
3:complement(99445..102140)
Genome browser
AA seq
389 aa
AA seq
DB search
MSSPTPMDVDVDEPLPVSNGNGSATTNPKPANAMAASMANASAKGKGKADHEAQNRQAAE
IKAANEREGLPWVEKYRPVSLDDVVSHKDTTTTIEKFIEAGRLPHLLLYGPPGTGKTSTV
LALARRLYGPPYRKHILELNASDDRGIDVVREQIKNFAMTKVLFSKGFKLVILDEADMMT
QAAQSALRRVIETHTKNVRFCILCNYVNKITPAIQSRCTRFRFSPLPESEVQRKVDEVVE
KEGVNITDDGKEALLKLSRGDMRRALNVLQACHAAYEVVDETAVYNCTGNPHPKDIERVV
QSMMSDEFGTSYSLITSLKIDKGLALQDLIAGAYEFLDTVELPKQSRIYLLDHLGSTEHR
LSVGGSEKMQLTALLGAFKLAVELSQKKV
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgtcctccccaaccccgatggacgtcgacgtggacgaacccctccctgtctcgaatggc
aatggcagtgctacaaccaatccgaaaccggccaatgcgatggctgcgtcgatggccaac
gctagtgcgaaagggaaagggaaagcggatcatgaagctcagaatcggcaggcggcggag
atcaaagctgcgaatgagagagagggattgccttgggtggagaaatacagacctgtctca
cttgacgatgtcgtttcgcataaagatacaacgacgaccattgagaaatttatagaagcc
ggacgacttccgcatctcttactatacggacctcccggaaccggtaaaacctccactgta
cttgccctcgctcgccggctctacggtcccccttatcgaaaacacatccttgagcttaac
gcttcagatgatagaggtatcgatgtggttcgggagcagatcaagaatttcgctatgacc
aaggtgttgttctcgaaagggttcaagttagtcatccttgatgaggcggatatgatgaca
caggccgctcagtctgctctccgacgagtcattgagacacacacgaagaacgtccgattc
tgtatcctctgtaattacgtcaacaaaatcaccccagctattcaatcacgatgtacgagg
ttccgattttcacctttacctgagagtgaagtgcagcgaaaggtcgatgaagtggtagag
aaggagggggtcaatatcactgatgatgggaaggaagcgttgctcaagctctcacgagga
gatatgagaagagctctcaacgttctacaggcttgtcacgcagcatatgaagtggtcgac
gagacggcagtgtacaactgcacaggtaatcctcatccgaaggatatcgaacgagttgtc
caaagtatgatgtcagacgaatttggaacgagttattccctgattacttctctgaagatc
gacaagggtctggcattacaagatctgatagcgggagcgtacgagttcctggatactgtc
gaattgccaaaacaaagtaggatctatctgctcgatcatctgggcagtacagaacatcga
ctatcagtcggcgggtccgagaaaatgcaattgacagcattgctaggagctttcaagctc
gctgtcgagttgtcgcagaagaaagtctag
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