Kwoniella newhampshirensis: 92179353
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Entry
92179353 CDS
T10314
Symbol
IAR55_002094
Name
(RefSeq) hypothetical protein
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
kne Kwoniella newhampshirensis
Pathway
kne03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
kne00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
92179353 (IAR55_002094)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
kne03041
]
92179353 (IAR55_002094)
Enzymes [BR:
kne01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
92179353 (IAR55_002094)
Spliceosome [BR:
kne03041
]
Complex C
Other components
Step II factors
92179353 (IAR55_002094)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
WHD_HA2
S1
DEAD
AAA_22
AAA_30
nSTAND3
AAA_19
PhoH
AAA_16
T2SSE
Sigma54_activ_2
ATPase
nSTAND_NTPase5
NB-ARC
EDC4_C
Motif
Other DBs
NCBI-GeneID:
92179353
NCBI-ProteinID:
XP_066803900
UniProt:
A0AAW0YPZ6
LinkDB
All DBs
Position
4:242846..247300
Genome browser
AA seq
1190 aa
AA seq
DB search
MSTDKELYKLELLSLVSRVSQELFNHTKLQDKKLAEFVIALHEQSKTPEAFQTKLGEIGA
DFPDSFVKNLDRLIVTMHPKYKRKAAKARAAAMSGKSTEKNGSIMDEQKQLQARKFPGLS
VPDREWTPADKYLEERATKEPMTDKLPKSLSVDDTMAQLAAVAQRRNRPAAEDYLDGEPA
AKKMRNGEGYDGRDNGYGSRLASKDGYGFAGGREDRGRTGRPMMDDRPVLYKIYNGSVSN
VRDFGAFVTLEGVQGRTEGLVHVSAITNGRVTAAGDFVKRGQPVKVKVMTIAGTKVGLSM
KDVDQSTGSDLSPHLRVKTAEEIANDERKMAARPTSGSNATPLIHVDERKGSSAKRLSSP
ERFEIKQLIASGVVDAADYPDLDEDFNTSVANPEIEEDIDIEVNEVEPSFLSGQTKVTLE
LSPVKIIKAPDGTLNRAALAGASLAKERRDLKRLEANEQADSESREINQPWLDPMASQTD
RQFASDIKGNLMGQKAAQTPAWKAANKVVSYGRITSLSIQEQRRSLPIYKLRDQLVQAIR
DNQILVVVGDTGSGKTTQMAQYLAEEGFLEKGRLGCTQPRKVAAVSVAKRVAEEVGCRLG
AEVGYTIRFEDLTSPETKIKYMTDGMLLRELLVDPDCTRYSVIMLDEAHERTIATDVLFG
LLKKACKRRPDLKLICTSATLDAAKFATYFWGCPIFTIPGRTFPVETLYTKEPEPDYLEA
SLITILQIHLMEPAGDILLFLTGQEEIDTACEVLYERVKALGPQVPELLILPVYAALPSE
MQSRIFDPPPPGARKVVIATNIAETSITIDGIYYVIDPGFAKQNAYDPKLGMDSLVVTPI
SQAQARQRAGRAGRTGPGKCYRLYTEIAYRNEMLPNPIPEIQRTNLASTILTLKAMGIND
LINFDFMDPPPAATMLTALEQLYALGALDDEGLLTRIGRKMADFPLDPALSKMLIKSVDY
GCSEEALTIVAMLQAGGQVYYRPKDKQAQADAKKAKFHQPEGDLLTLLAVYNGWKISKFS
NPWCFENFIQTRAMKTAQDVRKQLIGIMDRYKHDLVSCGTNFNRVRMAICSGFFRNAAKK
DPTEGYKTLVEGTPVSIHPSSALFQRPPEWCVYYELVLTAKEYMHQVTLIEPKWLSEVAP
TFFRVADQNKISKRKASEKIEPLFDRFAANKDDWRLSKQKRATRSSQTFG
NT seq
3573 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaccgacaaggagctgtacaaactggaactcttgtctctcgtgtcaagggtttca
caggaactcttcaatcacaccaaactacaggacaaaaagctcgccgagtttgtcatcgct
ttacatgagcagagtaagacaccggaagctttccaaacaaagctgggcgagattggtgcc
gattttccggattctttcgtcaaaaaccttgaccgtctgatcgttaccatgcaccccaaa
tacaaaagaaaagcagcaaaagccagagcagccgccatgtccggcaagtcgacagagaaa
aacggctcgataatggatgaacagaagcaacttcaagcgcgtaaattccccggattatcg
gtacccgaccgagaatggacaccagcagataagtatctggaagagagagcaactaaagaa
cccatgaccgacaagctgccaaaatctctctctgtggacgataccatggctcaattggcg
gctgttgctcagcgtcgtaatcgaccggccgctgaagactacttggacggagaaccggct
gccaagaagatgcgaaatggcgaagggtacgatggtcgggataatggctatggcagtcgg
ctagcctccaaggacggatatggtttcgcaggtggacgtgaggatcgaggacgaactgga
cgaccgatgatggatgaccgaccggtattatacaagatctacaatggcagtgtctcgaac
gtcagagactttggtgccttcgtcaccttggagggcgttcagggccggactgagggttta
gtgcatgtttcggccatcaccaatgggcgtgtcaccgctgctggtgatttcgtgaaacga
ggtcaaccagtaaaagtcaaggttatgaccatagctgggactaaagtcggcttgagcatg
aaggatgtggatcagagcactggttcggacctctctccacatctgcgtgtcaagactgct
gaagaaatcgcaaacgacgaacgaaagatggccgctcgtccaacctctggcagcaacgca
acccctctcatacatgtcgatgagcgcaaaggctcgagtgccaaacgtctctctagtcca
gaaaggtttgagatcaaacagctgattgccagtggtgtcgtcgatgctgcggattacccg
gacctggatgaagacttcaatacatccgttgccaaccccgagattgaggaagatatcgac
atcgaggtcaacgaggtagagccttcgttcctgtctggtcagacgaaagtcacgttggaa
ctctcgccggtcaaaatcatcaaagctccagacggaacacttaatcgcgctgctttggcc
ggagcctcgcttgccaaggagcgtagggatttgaaacgattggaagccaacgagcaagcg
gattcggaatcccgcgaaatcaatcagccctggttggaccccatggccagtcaaacagat
cgacaatttgcatcagacatcaaggggaacttgatgggtcagaaagctgctcagacaccg
gcctggaaggcagccaacaaagtcgtttcttacggcagaatcacgtcgcttagcatacag
gagcaaagacgaagtctacctatctacaaattgagagatcagcttgttcaggctattcga
gataaccagattctggtggtggtcggagataccgggtctggaaagaccacgcaaatggct
caatacttggccgaagaaggtttccttgagaaaggccgtcttggttgcacgcagccccga
aaggtggctgccgtctcggtggccaagcgagtcgccgaggaagttgggtgtcggcttggg
gcggaggttggctacaccattcgatttgaagatctaacgagtcctgaaaccaaaatcaag
tacatgacggatggaatgcttcttcgagaacttctcgtcgacccggattgtacaagatat
tcggtcatcatgctggatgaggctcatgagaggacgatcgccactgatgttttgttcggt
ctgctgaaaaaggcttgtaagagacggccagatcttaagctgatttgtacatccgcaaca
ctggacgctgcaaagttcgcaacgtatttctggggctgccccattttcacgatcccgggt
cgaacgttcccagttgaaacgctgtacacgaaagaacctgaacccgactatcttgaagca
tctctcatcaccattctgcagatccacttgatggagcccgctggtgatatccttttgttc
ctgactggacaagaagagatcgataccgcttgcgaagtcctgtacgaacgagttaaagcc
ctcggtcctcaagtcccagaacttctcattctgccggtgtacgctgctttgccgtcggag
atgcagtcacgaatcttcgatccccctcctcctggtgcccgaaaggttgtgattgccacg
aatatcgcggagaccagtatcacgatagacggaatttattacgttattgatcccggtttc
gcaaaacagaacgcatatgaccctaaacttggtatggattccttagtcgtgactcctatt
tcgcaagctcaagcgcgacaaagagccggtcgagcgggtcgtacgggcccaggcaaatgt
tatcgattatacactgagattgcttatcgaaacgagatgttgcctaacccgattcccgaa
atccagcgtaccaacttggcctccacgattctcactctcaaagcaatgggtatcaacgat
cttatcaactttgactttatggatcctccgcctgctgccaccatgttgaccgcactcgag
cagttgtatgcgcttggcgccctggacgatgaaggcttgttgaccagaataggacggaaa
atggccgacttcccactggatccggctctctcgaaaatgcttatcaagtctgttgactat
ggatgttcagaggaagctctgactattgtcgcaatgttacaagctggtggtcaggtgtac
tatcgaccgaaagacaagcaagcgcaggcagacgcaaagaaagccaagtttcaccaaccc
gaaggtgatctgctaactctattggctgtttacaatgggtggaaaatctcaaagttcagc
aacccctggtgcttcgaaaactttatccaaacccgggctatgaaaaccgctcaggatgtg
agaaagcaattaatcggtatcatggaccgttataagcacgatctggtatcctgtggtacc
aacttcaatagagtgcgaatggctatctgctcgggtttcttcaggaatgcggccaaaaaa
gacccgaccgaaggttacaaaaccctggttgagggtaccccggtcagcatccacccctcc
agcgcccttttccagcgaccaccagagtggtgtgtttactacgagcttgttctcaccgct
aaggagtatatgcaccaggtcactctcatcgagccaaaatggttatcagaagtcgcgccc
acattcttccgggttgctgatcagaacaagatcagtaagcgtaaagcttcagaaaagatt
gaaccgctcttcgatcgatttgctgccaacaaggatgactggcgtctcagcaagcagaag
cgagcgactcggtcgtctcaaactttcggttga
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integrated database retrieval system
