Kwoniella newhampshirensis: 92179484
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Entry
92179484 CDS
T10314
Symbol
IAR55_002225
Name
(RefSeq) hypothetical protein
KO
K15323
tRNA-splicing endonuclease subunit Sen34 [EC:
4.6.1.16
]
Organism
kne Kwoniella newhampshirensis
Brite
KEGG Orthology (KO) [BR:
kne00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
kne03016
]
92179484 (IAR55_002225)
Enzymes [BR:
kne01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
92179484 (IAR55_002225)
Transfer RNA biogenesis [BR:
kne03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing endonuclease complex
92179484 (IAR55_002225)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo
Motif
Other DBs
NCBI-GeneID:
92179484
NCBI-ProteinID:
XP_066804031
UniProt:
A0AAW0YYT7
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All DBs
Position
4:645962..647337
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AA seq
373 aa
AA seq
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MDTLPKNGESSTVGSQSSLPKEGSVTLYLVDGKATVWDAQVAATLHCVHHISGLRAGTLP
GVSQQNGFLGLPLTLMQEETAYLVRQGIAHLIPLSLNPTVPSPSEIAQHTAARIQRVRYL
EDRAREDELARRANSKAEFERAGEKAREKREARARAKAVKERERVARAAQGGEGEGVLIE
EEALKGSGKKEKKNVDNQKEKPVPSTTTTKSTTISSRDAISSTTPSPGYFHTVPSHPSHP
AFSTATIITSLPHPLFPFPSTPRDRALLGVFTTLQHQNYRMGLGPRFGGEYLIYPGDYLR
YHAHFTSQVIVRDQFIRPAEIVAWGRLGTGTKKAGLLCCWDDGKRGDDKLVERIEDDDKA
EIEFYSLEWANFG
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atggacactctgcctaagaacggcgagtcatcgacagttggatcccagagcagtctccca
aaggaaggatcagttactctatacctcgtcgatgggaaagctacagtatgggatgcgcaa
gtcgccgccacgctccattgcgtacatcacatatctggattgagagccggtaccttacct
ggtgtttcgcaacagaatgggttcctaggactacccctcaccttgatgcaagaggagacg
gcctacctagtaagacaaggtatcgcccacttaatcccactctctctcaaccccaccgtc
ccctcgccatccgagatcgcccaacatacagccgcacgcatacaacgagtccgatacctc
gaagatcgagctcgggaggacgagttggcacgaagagcgaattcgaaagctgaattcgag
agagccggcgagaaagcgagagagaaaagagaggcaagagcgagggctaaagcggtgaaa
gagagagagagggtggctcgtgcagcccaaggtggggagggcgagggcgtgctgattgaa
gaggaagcgcttaagggaagtgggaagaaggagaagaaaaatgtggacaaccaaaaggag
aaacctgtgccatctacaacgacgacaaaatcgaccactatttcgagtcgggacgcgatt
tcatcaaccacaccgtcaccgggatatttccatactgtcccttctcatccttcacacccc
gcattttccaccgccaccatcatcacctccctcccacaccctctgttccctttcccatcg
acacctcgcgatcgagctctcttgggcgtcttcacgactcttcaacatcaaaattacagg
atgggtctcggacctcgattcggtggtgaatatctgatctatccaggcgactatcttcga
tatcacgctcatttcaccagtcaagtgatcgtccgagatcaatttatcagaccggcagag
atagtggcgtggggaaggttgggtacaggtacgaaaaaagccggtctcttatgttgttgg
gatgatgggaaacgtggtgatgacaaattggtggaaaggattgaagacgacgataaagca
gagattgagttctacagtcttgaatgggcaaactttggataa
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