Kwoniella newhampshirensis: 92180120
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Entry
92180120 CDS
T10314
Symbol
IAR55_002862
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
kne Kwoniella newhampshirensis
Pathway
kne03020
RNA polymerase
kne03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
kne00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
92180120 (IAR55_002862)
09124 Replication and repair
03420 Nucleotide excision repair
92180120 (IAR55_002862)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
kne03021
]
92180120 (IAR55_002862)
03400 DNA repair and recombination proteins [BR:
kne03400
]
92180120 (IAR55_002862)
Enzymes [BR:
kne01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
92180120 (IAR55_002862)
Transcription machinery [BR:
kne03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
92180120 (IAR55_002862)
DNA repair and recombination proteins [BR:
kne03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
92180120 (IAR55_002862)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_4
RNA_pol_Rpb2_5
MRNIP
Motif
Other DBs
NCBI-GeneID:
92180120
NCBI-ProteinID:
XP_066803474
UniProt:
A0AAW0YS01
LinkDB
All DBs
Position
5:759738..764026
Genome browser
AA seq
1243 aa
AA seq
DB search
MDAGTDYTISQPVEDGFSYDPNYDYHQYQSDDVKAGDENKYDMDGEYEEAEPISQEDYWT
VINSFFDEKGLVRQQLESFNEFIENTMQEIVDDHARLTLDQFTQYTGVTGDETRRYEISF
GQIYLARVNHTEMDGRTNMLFPQEARLRNLTYSAPLYVDIKKRTLTASGVDDPIEADWKP
AVGQDGEIEAAEEEKVSIGKVPVMVRSNFCLLHGLPDDKCHDIGECHYDQGGYFIISGSE
KVLIAQERMASNHVFVFLKAAPARFTYFAEINSQKEKGGKVANHTEVRLYSRAPGTTGGV
IRVSLPYTKVDIPLVIVFRALGIVPDRDVLSHICFGEDDDPLLEMLQPSIEEAFAVQDRD
TALDFIGRRGQHEKAPRAQRQRAAFDILHKEFLPHVSTSEGFESKKAFFLGYMVHRLCSA
ALGRKDLDDRDHFGNKRLDLAGPLMAEMFGVVFGKLREDMYRYLKKNKDFALNMAIRPNT
VTDGLKYALATGNWGKRGNTRAGVSQVLNRYTFASTLSHLRRTNTPIGRDSKAAKPRQLH
NTHWGMVCPAETPEGAACGLVKNLALMSYISVGSYSAPVMEFLEEWGLEDLSEYTHAPSA
TKVFVNGVWMGIHRDAPTLHANLLQMRRGGQLKHEVSIVRDIRERELRLYTDYGRVCRPL
FIVDQATQSIRLKREHITRIERTSEAGEAWDQLLSDGIIEYVDASEEETILIAMTSEDLE
NARTKNSKTELVRDRAAHNLESFDPSARIKSTVFSKSYTHMEIHPSMILGVCASIVPFPD
HNQSPRNTYQSAMGKQAMGVFLTNYQLRMDTMANILYYPQKPLATTRSMEYLKFSELPAG
QNAIVAIMCYSGYNQEDSVIMNQSSIDRGLFRSLYYRSYTDTEKMKGMTKAETIEKPDRN
ETLRMKQGSSDRYAKLDVDGLVSPATNVNGDDILIGKTAPLPEDSEELGQRTQLHQKRDI
STPLKSTEQGLVDQVMITTNGEGHKFVKIRVRSTRVPQIGDKFASRHGQKGTIGITYRQE
DMPFTAEGLVPDIIINPHAIPSRMTIGHLVECLLSKLSTLTGGEGDATPFTELTVEAVSQ
MLRAKGYQSRGFEVLYHGHTGRKLQAQVYFGPTYYQRLKHMVDDKIHARARGPLQILTRQ
PVEGRSRDGGLRFGEMERDCMISHGIAGFLKERMYDSSDAFRIHVCDLCGLMAVANLKKQ
EFYCSVCRNSTQISQVYIPYAAKLLFQELQAMNIACRMYGDMD
NT seq
3732 nt
NT seq
+upstream
nt +downstream
nt
atggatgcaggtacagattacacaatctctcaacctgtcgaagatgggttttcttatgac
ccaaattacgactatcaccaataccaatccgacgatgtgaaggctggagatgagaacaag
tacgatatggatggagagtacgaggaggcggagcccatcagtcaggaagattattggacg
gtgatcaactcgttctttgacgaaaagggtctggtccgacaacaactcgaatccttcaat
gagtttatcgagaacacaatgcaggagatcgtggacgatcacgcgaggttgacgttggat
cagttcacgcaatacacaggtgtcactggtgacgaaacgcgtcggtacgagatttcgttc
ggacaaatctaccttgcgagggtgaaccacaccgagatggacggtcgaacaaacatgtta
tttcctcaagaagcgcgacttcgaaatctcacctattctgccccgctctatgttgacatc
aaaaagcggacgctcaccgcgtctggagtggacgaccccattgaggctgactggaaacct
gctgtcggacaagatggagagatcgaggctgccgaggaggagaaggtgtctatcggaaag
gtccccgttatggtcagatcgaacttctgtctcctgcacggtctaccggatgataaatgt
cacgacatcggagaatgtcattatgaccagggaggatacttcatcatttcaggatccgag
aaggtgttgattgcacaagaaagaatggcctcgaaccacgtattcgtcttcctgaaggcg
gcacctgcacgattcacctactttgcggagataaattctcagaaggagaaaggtggtaag
gtggcgaaccatacggaagtcagactgtattcgagagcacctggaactactggtggtgtc
atccgtgtatcccttccttacacaaaggttgatatcccccttgtcatcgtcttccgagct
ctcggtatcgtgcccgacagagacgttctcagccacatctgtttcggtgaagacgacgat
cctctcctcgagatgctccaaccttccatcgaggaggctttcgctgtgcaagaccgagac
accgcacttgatttcattggtcgacgtgggcaacatgagaaagcgccgagagcacaaaga
caacgtgccgcgttcgacattctccacaaggagttcttaccacacgtgtctacatcggaa
ggattcgagtcaaagaaagccttcttcttgggttacatggttcacagattatgttctgcc
gcgctgggaaggaaagatttggatgatcgagatcactttgggaacaagagattagacctc
gcggggccgttgatggcagagatgttcggggtggtgttcggaaagctcagagaggatatg
taccggtacctgaagaagaataaggactttgctctgaacatggctattcgaccgaacacc
gttacagacggtctcaaatacgctttggctacgggcaattggggaaaaaggggtaacaca
cgagctggtgtctcgcaagtgctcaaccgatacacctttgcatcgactctttcccatctg
cgaagaaccaatacacctatcggacgagattccaaggcagcaaaacctcgacaactgcac
aacacgcactggggtatggtctgtcctgccgagacacctgaaggagctgcgtgtggtttg
gtcaagaacctcgcactcatgtcatacatctctgttggttcctactcggcaccggtcatg
gagttcctcgaggaatggggtctggaggatttgtccgagtatacgcatgcgccttcggct
acgaaggtgttcgtcaacggtgtctggatgggtatccaccgagatgcgccaacgctgcat
gccaacctcttacaaatgcgacgaggcggtcagttgaagcacgaagtcagtatcgtgcga
gatatccgagagcgagagctacgattgtacaccgattacggacgagtttgtcgtccactg
ttcattgttgatcaagccacccagagcatcaggctcaagcgggagcacatcactcgtatc
gagcggaccagtgaagcaggcgaggcgtgggaccagctgctgtcggatggcatcattgaa
tacgtggacgcttcggaagaagaaacgatccttatcgccatgacatcagaggatctagaa
aatgctcggacgaagaacagcaagacggagttggtgagggatagagccgcccacaacttg
gaatccttcgacccttcggcgaggatcaagagtacggtgttcagcaaaagttacacgcat
atggagattcatccaagtatgatcttgggtgtatgtgccagtatcgtgccttttcctgac
cacaatcaatcaccccgtaacacgtaccagtccgcgatgggcaaacaggctatgggtgta
ttcctcaccaattatcagctgcgtatggacaccatggcgaatattctgtactaccctcaa
aagccactggccacgacacgatccatggaatatctcaagttctcggaacttcctgctgga
caaaacgccatcgtcgcgatcatgtgttattcgggttataaccaagaagattccgtcatt
atgaatcagagttccatcgaccgaggtctgttcagatcgctctactaccggtcatacacc
gacacagagaagatgaagggtatgacaaaggcggagacgatcgagaaaccagataggaac
gagacattgaggatgaagcaaggctcaagcgatcgttatgccaaactcgacgtggatggt
ttggtcagcccagcaaccaatgtcaatggcgatgacattctcattggtaagacggcacca
ctgcccgaagatagcgaggagctgggtcaaagaacgcagctgcatcagaagcgagatatc
tcgacgccgctgaagagcacggagcaaggtctggtagaccaagtcatgatcacgacgaac
ggcgagggacataaatttgtcaaaattcgagtccgatcgacccgagttcctcaaatcggt
gacaaattcgcttctcgacacggtcagaaaggtaccatcggtatcacatatcgacaagaa
gacatgccgttcacagcggaaggtcttgtacctgacatcatcatcaacccccacgctatc
ccctcccgaatgacgataggacacttggtcgagtgtctcttgtcaaagctctctaccttg
actggaggagaaggtgacgctacgccattcacagagttgactgtggaagctgtgtcgcaa
atgttgagagcgaagggttaccaatcgcgaggattcgaggtgctctatcacggccacacg
ggaaggaagctgcaggctcaggtgtatttcggcccgacgtattatcaacggttgaaacat
atggtggacgacaagatccacgcgagggctcgaggacctttgcagatcctgaccagacaa
cctgttgaaggtagaagtcgagatggtggtttacgtttcggagagatggagagagattgt
atgatctcgcatggtatcgctggattcttgaaggagaggatgtacgactcgtccgatgcc
ttcagaatacacgtctgcgacctttgcggtctcatggcggttgcgaacctgaagaagcaa
gagttctactgctcagtgtgcagaaacagtactcagatctctcaagtgtacattccttat
gcggcgaagttgctcttccaagagctgcaagcgatgaacatcgcatgtcgaatgtatggc
gatatggattag
DBGET
integrated database retrieval system
