Kwoniella newhampshirensis: 92180517
Help
Entry
92180517 CDS
T10314
Symbol
IAR55_003259
Name
(RefSeq) hypothetical protein
KO
K18748
protein SSD1
Organism
kne Kwoniella newhampshirensis
Brite
KEGG Orthology (KO) [BR:
kne00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kne03019
]
92180517 (IAR55_003259)
Messenger RNA biogenesis [BR:
kne03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
92180517 (IAR55_003259)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_Dis3
Dis3l2_C_term
CSD2
Rrp44_CSD1
OB_HELZ2
Motif
Other DBs
NCBI-GeneID:
92180517
NCBI-ProteinID:
XP_066802758
UniProt:
A0AAW0YM14
LinkDB
All DBs
Position
6:164264..170263
Genome browser
AA seq
1706 aa
AA seq
DB search
MADPAVAPTPPPIPPTSSTLAPPSQNPSRPSSANSNRSGSSRGRGGRSSNGATSSNISRS
NSNASSRGASESGRGDKKKQSGPTTTISGGVSLGMKDASSGESSQTSKKGKNGGATVSNA
TQKGREKQKDKSLVVGEKTQKPNNGNVAKGGKRSASNRRPAPINTAAAASEPRDFDSKPS
SSDDPSGVQSEPTPRTLHAHVSAPRTAMQAAVDAANQKSAQSGALANLQKMISDLKTLPT
QAGQSSGTSNGSRSASGAREPANSQSPAPTAPTSASSKPVKIPDPASTNGAKKLKADAPS
FTPSFTSVSPIASSSGLSLSPKAIVPTVGSPVQPRSALQGTTIDPRRASSGPLAAVPPAP
AFNASPVQTFPNTVPAFFQNQLPVHREADNEDLPPLSYAQHQDFPFQQQQLLSAQQQQYQ
YIQLLQAQLAATQLAAHQQQQQMQPQQQMGSFIAPRFQALAAQRAVAQQQQQIAQLAQAQ
QIYELQQAQILRQQEEVGPRASAADVAKNQPVFEEESPEPRNAVLGPTGRPQLAPSFTFG
AKPRHAAKESVSEQDSTRDSMSPPQVNASPPVVVNRSEGIGGAAATGLAGLAARAHKRTG
SEMSHAMQQQLAIQQEIEALQARQKELMQQDLASQGESPLTQLNTVLHTKQTPSQTLSRH
RRVQSSLPSATPPEISGVPRDLSEDNDQPRALRNLGEMPPPPIPVGHSRRHSVNVFNKPA
GTGAGFGMGGEIPEDGVPNGGGFGHHRSSSRSGMESGNWRLGSGSGSISNINNNASMQIA
DLAAAQAQLQSLAQFRAAAGGGHSKMASFSFPNMLPNLLAATTLQAPIGQSLWQQQQAFQ
MQLQQTAQGPQRKSLFAPYLPQASLPPLLQAGKLVVGVLRVNKKNRSDAYVATDVLEADI
YICGSKDRNRALEGDIVAVELLDVDEVWGTKKDKEEKKRKKEENAAYDLKPSTAKKLEKK
KDDVEVEGQGLTLFDDEEVNDETKPTYAGHVVAVVERMPGQLFSGQLGVLRPSSAATKEK
QEIERREREGDRVRRDEPESRPKIVWFKPTDKRVPLIAIPTEQAPSDFIDNPEAYGNKLF
VATIKRWPITSLHPFGTLVEELGPIGDKEVETSALLKDCNFPTEEFTDLTIKCLPPLPWS
IPEREYDIRTDLRSDRVFTIDPPTAKDLDDALSVTRKDDGTIEVGVHIADVSYFVKANTA
MDREARKRATSVYLVQRAVPMLPSQISEELCSLVPDVDRLTFSAIFTFDADGNIVGKKFA
RTIIKSCGKLSYADAQGVVDGGSLESRKVTGTFAVSEVEADIKLLHDLATKIKTKRIEAG
AMLANKLKVSFELDDQGRPIDCETYRRTQANTLVEEFMLLANISVAQVIANGLPEQSLLR
RHEAPIERRLDGFVKRAQKLGFEMDPASAGTLQKSFQKVVDADAALCLELLKKKSMQRAR
YFCTGMLDIAKYSHWALNTPLYTHFTSPIRRYADVLVHRMLDACLSSPNPNDVKFHMDRD
QVAKCAQQCNMKKQSAKLAEEQSVHLYLCMLIHDLTERYGPVIREAKVTGVLDAAFDVVI
PEFGIEKRVHVDKMPVENVVYDEHKDVLSLYWTSQDVLSFLAETTDDPHLLKIQSLGERH
AIGTSTSQSADESAPFDDSLPSGTNSKQYAKSAQRVTPKYEGLRDVEGGHKVQDVRELMA
LPVIVTSDITKSPPVLVVYACNPYAA
NT seq
5121 nt
NT seq
+upstream
nt +downstream
nt
atggccgacccagcagtcgcgcccactcctcctcctatccctccgacatcgtctaccctc
gctcctccttctcagaacccttcacggccatcctccgccaactcgaacaggagcggctcg
tctcgtggacgtggaggtcggtccagtaacggagcgacatcttccaatatatcgcgaagt
aactccaacgcgtcgtcacgcggtgcgtcggaaagcggtcgaggtgataagaagaagcag
agcggcccgacgactaccatcagcggcggtgtcagtcttggcatgaaggacgcgtctagt
ggcgaatcatctcagacctcaaagaaaggcaagaatggcggtgcaacagtgagtaatgct
actcagaaaggaagggagaagcagaaagacaaatctcttgtcgtcggtgagaagacgcaa
aagccgaacaatgggaatgtcgcaaagggagggaaaagatcggcatcgaatcgacgacct
gcacctatcaacaccgctgccgcagcttcggaacctcgcgatttcgattcgaaacccagc
tcgagcgatgacccgtccggtgtgcagtccgagccgacgccgcggacccttcatgctcat
gtgtctgcccctcgaaccgctatgcaggccgccgtcgatgcggcgaatcagaagagcgcg
caatctggagccttggccaatctgcagaagatgatttccgacctcaagactctccctact
caagctggacagtcaagtggtacttcaaatggctcaaggtcagcgagtggggcaagggag
ccagcaaattctcaatctccggcaccaacggcgccaacgtctgcgtcgtcgaaacctgtc
aagatcccggatccggcttcaacgaacggggccaagaaactaaaagccgacgcccctagt
ttcaccccatctttcacttccgtctcgcccatagcctcgtcttcgggtctgtccttgtca
cctaaggcgatcgtacccaccgtgggcagtccagttcagccgcgatcggcgttacagggc
accaccatcgaccctcgtagggcatcatcaggtcccttggctgcggttcctcctgcgcct
gctttcaatgcttctcccgttcaaacattccccaacacggttcccgctttcttccaaaac
caacttcccgtccaccgggaagctgacaatgaggacctcccgccgttgtcatacgcccag
catcaagacttcccctttcaacaacaacagctcctttccgctcagcaacagcagtatcaa
tatatccaattgcttcaagcacagctggccgctactcagctagctgctcaccagcaacaa
cagcagatgcagcctcagcagcaaatgggcagtttcatcgcaccgcgatttcaagctctc
gctgcgcaacgagcggtcgctcaacagcagcaacagattgcacaactcgcacaagcccag
cagatctatgagttgcaacaagctcagatacttcgccaacaggaagaagtcgggccgcgc
gcatcggcagctgatgtggcgaagaaccagcctgtattcgaggaagaatcgcctgaacct
cgaaatgctgttctcggtcctactgggagacctcaattagccccgtcgttcacattcggt
gctaagccaagacatgcggcgaaagaaagcgtatcagagcaggattcaactcgtgactcc
atgtctccacctcaagtgaacgcttcccctcctgtcgttgtgaaccgaagtgagggaata
gggggggcggcagccaccggtcttgctggattggctgccagagctcacaaacggactggc
agcgaaatgtcacacgcaatgcaacagcagcttgcgatacaacaagagattgaagcattg
caagctaggcaaaaagagttgatgcagcaggatcttgctagccagggtgaatcaccgctt
actcagctcaacacagtgctccataccaagcaaactccatcgcagaccctctcgcgacac
aggagagtccaatcgagtctcccatctgccacaccgcccgaaatctcaggcgtacctcgt
gatctatcagaggacaatgatcagcctcgagctttgcggaatttaggggagatgccgccc
cctccaattccagttggtcactcgcgacgtcacagtgtaaatgttttcaacaaacctgct
gggaccggtgcaggatttggtatgggcggtgagattccggaagacggcgtgcctaatggc
ggtggctttggccatcatcgatccagtagtcgatccgggatggaaagcggcaactggcgt
cttggctctggatccggcagcatcagcaatatcaacaataatgctagcatgcagatcgcc
gatctagcagcggctcaagctcaactccagtctctcgcccagttccgagcggcagcgggc
ggtggtcatagcaagatggcctcattcagtttcccgaacatgcttccaaatctgcttgcc
gccaccactttgcaagctcctatcggccaatctctatggcagcaacagcaagcattccag
atgcagctgcaacagactgcccaaggcccacaacgaaagtcactctttgcgccatacctt
ccccaagcctctctcccgcctcttctccaagcgggcaagctcgtcgttggcgttcttcga
gtgaacaagaagaaccgatcagacgcttatgtcgccactgatgtcctcgaggctgatatc
tacatttgcggctctaaagatcgaaacagagcattggaaggagatatcgtcgcagtggaa
ctacttgatgtcgacgaggtttggggaacgaagaaggacaaggaggagaagaagaggaaa
aaggaagagaacgcggcttatgatctcaagccttcgaccgcgaagaaattggaaaagaag
aaggacgatgtcgaggttgaaggtcagggtctgaccctgttcgatgacgaggaggtgaat
gatgagacaaaaccgacttatgcgggtcatgtcgtcgcagtggtcgagcgaatgccaggt
caattgttctccggtcaactcggcgtactccgaccttcgtcggctgcgaccaaggagaaa
caagaaatcgaacgacgcgagcgcgagggtgacagagtcaggagagatgaacccgaatct
cgacccaagattgtttggttcaaaccaacggacaagcgcgtgcccctcattgcgattcct
acagagcaagctccatccgactttatcgacaatccggaggcatacggtaacaagctcttt
gtggcaacaatcaaacgatggccaatcacttccctgcaccctttcggtacattggttgaa
gagcttggaccaatcggggacaaggaagtcgagaccagtgctttactgaaggactgtaac
ttcccaacggaggaattcaccgacctcacaatcaagtgcctgcctcctctgccatggagt
attcctgaacgcgagtacgatattcgaacagacctcaggagtgacagggtattcaccatc
gatcctcctactgccaaagacttggatgatgccctgtctgtgacgagaaaagacgacggg
accatcgaagtcggtgtgcatatcgcggatgtgtcgtactttgtcaaagccaatacggcc
atggatcgagaagctcgaaaacgagccacaagcgtttatcttgtccaacgagcagtccca
atgcttccctctcagatttccgaggagctttgcagtctggtacccgatgtggacagattg
acgttctctgcgatcttcacgttcgatgcagacggcaacattgtggggaaaaagttcgct
aggaccatcatcaagtcgtgtgggaaactctcgtacgcggatgcccaaggagtcgtggat
ggtggatcactagagagtaggaaggttactggcacattcgctgtctccgaagtcgaggca
gacatcaagctccttcatgacctcgcaaccaaaatcaagacgaagcgtattgaggctgga
gctatgctcgccaacaaacttaaggtgtctttcgagctggatgaccagggtcgacccatc
gattgtgagacatacagaagaactcaagcgaatacccttgtggaggagttcatgctgctg
gccaacatctcagttgcgcaggtgatcgcgaatgggctccccgagcaatcgcttttgcga
cgacatgaagctcccattgagcgacggcttgacggcttcgtcaagcgggctcagaagctc
ggtttcgagatggacccggccagcgcaggaaccttgcagaagtcctttcagaaagttgtt
gatgccgacgctgcgctctgcctagagctgctgaaaaagaagtccatgcagagggctagg
tacttctgcacgggcatgttggatatcgccaagtattcgcattgggctttgaacacgcct
ttgtatacccatttcacgtcgccgatccgacggtacgccgatgttttggtgcaccgtatg
cttgacgcatgtctgtccagtcccaacccaaacgatgtcaaattccacatggacagagac
caggtcgccaagtgcgcgcagcagtgtaacatgaagaagcagagcgccaagttggccgaa
gaacagtcggtgcacttgtatctctgcatgctcattcatgacttgaccgagcgatatggt
cctgtcatccgagaggccaaggtgactggtgtgctggacgcggcgtttgacgttgtcatc
cccgagtttggcatcgagaagagagttcacgtggacaagatgcctgtggagaatgtggtc
tatgatgaacacaaagacgtcctctctctttactggactagtcaggacgttctctctttc
cttgccgaaaccaccgacgaccctcacctcctcaagatccagtcactaggagaacggcac
gccattggaacttcgacctcccaatcagcagacgaatccgctccgtttgatgattctctt
cccagtggtaccaactcaaaacagtatgccaaatccgcacaaagagtgacgccgaaatac
gaagggttgagagatgtcgaggggggacataaagtgcaggatgtgcgggaattgatggca
ctacctgtaattgtgactagcgatataaccaaatcgcctccggtactggtggtttatgct
tgtaatccatacgcggcataa
DBGET
integrated database retrieval system