KEGG   Kwoniella newhampshirensis: 92180734
Entry
92180734          CDS       T10314                                 
Symbol
IAR55_003476
Name
(RefSeq) hypothetical protein
  KO
K12881  THO complex subunit 4
Organism
kne  Kwoniella newhampshirensis
Pathway
kne03013  Nucleocytoplasmic transport
kne03015  mRNA surveillance pathway
kne03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:kne00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    92180734 (IAR55_003476)
  09122 Translation
   03013 Nucleocytoplasmic transport
    92180734 (IAR55_003476)
   03015 mRNA surveillance pathway
    92180734 (IAR55_003476)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:kne03019]
    92180734 (IAR55_003476)
   03041 Spliceosome [BR:kne03041]
    92180734 (IAR55_003476)
Messenger RNA biogenesis [BR:kne03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     92180734 (IAR55_003476)
    TREX complex
     92180734 (IAR55_003476)
Spliceosome [BR:kne03041]
 Complex C
  Other components
   EJC/TREX
    92180734 (IAR55_003476)
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    92180734 (IAR55_003476)
SSDB
Motif
Pfam: FoP_duplication
Other DBs
NCBI-GeneID: 92180734
NCBI-ProteinID: XP_066802975
UniProt: A0AAW0YYQ4
LinkDB
Position
6:841506..842484
AA seq 214 aa
MSTNMDIDKSLDEIMKDKPKARRGGRRGGAPTTGARARYATTVPKAAPKTAAAPKPVTVE
AIKIIISNLPQDVTEAAVRVSLTDMQNSLTFPGPHAIYGRTCENGTNVVQRDRKEYRSGY
CRVQEQGRRQQGPCCLMIDNQRPMKVEIAIDLNQAQSLASRVAPAAPARSGTQPRGGRGG
RGGRGAAKPRAPRPVKKTAEELDAEMAAYKTDAA
NT seq 645 nt   +upstreamnt  +downstreamnt
atgtcaaccaacatggatatcgacaagtctctcgacgagatcatgaaggacaagcctaag
gctcggaggggtggtcgtcgcggaggcgcacctactaccggtgctagggctcgatatgct
actactgttcccaaagcagctcccaagactgctgcggctccaaagcctgtcaccgttgag
gctatcaagatcatcatcagcaaccttccccaagatgtcactgaagctgcggtccgagtg
agtttaaccgatatgcagaactcgctgactttcccaggacctcatgcaatctacggtagg
acctgtgagaacggtacaaatgtcgtacaacgcgaccggaaagagtacaggtcaggctac
tgtcgtgttcaagaacaagggcgacgccaacaaggcccatgctgcttaatgatcgacaac
caacgaccgatgaaagtggagattgccatcgacctcaatcaggctcagtcattggcatct
cgtgtcgcgcctgccgctcctgcacgatcgggcactcaaccccgcggcggacgtggcggt
cgaggtggacgtggtgcagccaagcctcgtgctcctcgaccagtgaagaagaccgccgaa
gaactggacgcggagatggcagcatacaaaaccgatgctgcttaa

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