Kwoniella newhampshirensis: 92180734
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Entry
92180734 CDS
T10314
Symbol
IAR55_003476
Name
(RefSeq) hypothetical protein
KO
K12881
THO complex subunit 4
Organism
kne Kwoniella newhampshirensis
Pathway
kne03013
Nucleocytoplasmic transport
kne03015
mRNA surveillance pathway
kne03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
kne00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
92180734 (IAR55_003476)
09122 Translation
03013 Nucleocytoplasmic transport
92180734 (IAR55_003476)
03015 mRNA surveillance pathway
92180734 (IAR55_003476)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kne03019
]
92180734 (IAR55_003476)
03041 Spliceosome [BR:
kne03041
]
92180734 (IAR55_003476)
Messenger RNA biogenesis [BR:
kne03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
92180734 (IAR55_003476)
TREX complex
92180734 (IAR55_003476)
Spliceosome [BR:
kne03041
]
Complex C
Other components
EJC/TREX
92180734 (IAR55_003476)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
92180734 (IAR55_003476)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FoP_duplication
Motif
Other DBs
NCBI-GeneID:
92180734
NCBI-ProteinID:
XP_066802975
UniProt:
A0AAW0YYQ4
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All DBs
Position
6:841506..842484
Genome browser
AA seq
214 aa
AA seq
DB search
MSTNMDIDKSLDEIMKDKPKARRGGRRGGAPTTGARARYATTVPKAAPKTAAAPKPVTVE
AIKIIISNLPQDVTEAAVRVSLTDMQNSLTFPGPHAIYGRTCENGTNVVQRDRKEYRSGY
CRVQEQGRRQQGPCCLMIDNQRPMKVEIAIDLNQAQSLASRVAPAAPARSGTQPRGGRGG
RGGRGAAKPRAPRPVKKTAEELDAEMAAYKTDAA
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaccaacatggatatcgacaagtctctcgacgagatcatgaaggacaagcctaag
gctcggaggggtggtcgtcgcggaggcgcacctactaccggtgctagggctcgatatgct
actactgttcccaaagcagctcccaagactgctgcggctccaaagcctgtcaccgttgag
gctatcaagatcatcatcagcaaccttccccaagatgtcactgaagctgcggtccgagtg
agtttaaccgatatgcagaactcgctgactttcccaggacctcatgcaatctacggtagg
acctgtgagaacggtacaaatgtcgtacaacgcgaccggaaagagtacaggtcaggctac
tgtcgtgttcaagaacaagggcgacgccaacaaggcccatgctgcttaatgatcgacaac
caacgaccgatgaaagtggagattgccatcgacctcaatcaggctcagtcattggcatct
cgtgtcgcgcctgccgctcctgcacgatcgggcactcaaccccgcggcggacgtggcggt
cgaggtggacgtggtgcagccaagcctcgtgctcctcgaccagtgaagaagaccgccgaa
gaactggacgcggagatggcagcatacaaaaccgatgctgcttaa
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