Kwoniella newhampshirensis: 92180808
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Entry
92180808 CDS
T10314
Symbol
IAR55_003550
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB1
KO
K03006
DNA-directed RNA polymerase II subunit RPB1 [EC:
2.7.7.6
]
Organism
kne Kwoniella newhampshirensis
Pathway
kne03020
RNA polymerase
kne03420
Nucleotide excision repair
Brite
Enzymes [BR:
kne01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
92180808 (IAR55_003550)
Transcription machinery [BR:
kne03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
92180808 (IAR55_003550)
DNA repair and recombination proteins [BR:
kne03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
92180808 (IAR55_003550)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
92180808
NCBI-ProteinID:
XP_066803049
UniProt:
A0AAW0YNW2
LinkDB
All DBs
Position
6:1054398..1060368
Genome browser
AA seq
1795 aa
AA seq
DB search
MTVTFPYSSAPVKQVKEIQFGVMSPEEIKAFSVAKIEYMEVMDDNGRQKVGGLMDPKMGT
IDRNFKCQTCLEGMAECPGHFGHIELARPVFHQGFLVKVKKILECVCYSCGKLKVDLRDP
MVGNIVRRVKAQHRLRAIWVLAKDKRICETDTVDDENGDATAENEYLAEQRADKVTGHGG
CGHEQPLWRKKALKLNGVWKPTDKGDETAEPEERSVSPGEIYNILKKIPAEDLHIMGLNA
EYARPDWMILTVLPVPPAAVRPSISVDGGAMRSEDDLTYKLSQIIKFNGVVRRMEAEGVP
PSVVNEQFDLLQYHVATYMDNDIAGLPRDQQKGGRAIKAIRARLKGKEGRMRGNLMGKRV
DFSARTVITGDPNLQLDQVGVPKSIAMTLTYPERVTPYNIVYLQTLVNNGPATYPGARYY
VKDTGERVDLKYRKSGDPISLQFGWIVERHLKDGDFVLFNRQPSLHKMSMMSHRVKLMNY
STFRLNLSVTSPYNADFDGDEMNLHVPQSEETRAELSQIAWVPRQIVSPQANKPVMGIVQ
DTLCGVRKFTLRDNFIDWLQVQHILLWLPGWDGTIPPPAILKPKPMWTGKQLLSMTIPKG
INIAYKNNEKPSPIDVTDENVLIDDGELIHGTIVKNMAGSANNGLIHVIFRELGHIACRD
FFSACQMMVNFWLLHFGFSVGIGDTIVDKATMAGITNRMVEAKEAVQTLITEAEANKMKP
KPGMTIRETLEASIANELNKARDWTGKTTQDNLKDDNNVKQMVVSGAKGSFINISQMSGV
VGQQFVEGKRIHFGFRHRSLPHFSRDDYGPESRGFVENSYLRGLTPQEFWFHAMGGREGL
IDTAVKTAETGYIQRRLVKAMEDLKVGYDGTVRNSVGDVVQFLYGEDGMDGAAMEKQSLD
IIRLSHRAFERRYKIDVIGATGGFSRGTLQASIDQNSVSLQNLLDDEYRLLSDYREQLRS
EVYLDGTPGHPLPVNIQRLIQNSQQIFHIDPRVPSDLDPVYLIEQRKALADRLIVVRGDD
KLSKVAQRNATLVFHMLLHSHLATRRVLEEYHLNKEAFDWVIGEVEQIFNRAVVNAAEMV
GTLAAQSIGEPATQMTLNTFHYAGVASKSVTGGVPRLKEIINVAVNIRTPALNVYLDREY
SRTEEDAHQIMRKLTYTRLRDITASVEIFYDPKLDSTDIEEDRDFVDAFFAIPDEDIRLE
LHSPWLLRLELDRAKVLEGGYEMSEIVNAIAATVGKDVFVIHSEDNAPKLIIRVRTVAEE
KEEEGLLGDEDMFLKRIEGTLLDQVELGGITGIQRVFISEGKKVVLSQQGEYDQEKEWFL
ETDGINLKEVMAIDGVDAFRTYSNNCYEVYETLGIEGARNALFKELNGVIEMGGSYVNYR
HLALLCDLMCSKGSLMSITRHGINRTDAGALSRSSFEETVEILLEAAAVGDVDDCRGVAE
NVLLGQMAPMGTGAFDVSLDMNMLKDVIVDHRLPVQNMLAAGGAGAMTPGGAMTPYDNFS
PMWNGDKVTVGAAAFSPMQTSTNDEGGNFAYMGYGQSPMHGGMSPGGYSPSSPAGYSPTS
PFAVTSPAYSPASPFHSGGAASPWVPRGGYGATSPVYSPTSPQYSPSSPQFSPSSPSFSP
SSPTYSPASPAYGGSRAGAGSRASPYSPASPAYSPTSPMGGMGATSPQYSPTSPRYSPAS
PAFSPTSPTYSPTSPAAFQATSPRYSPASPQFSPTSPTYSPASPAYSPASPAYSPASPAY
SPASPAYSPASPTYGGDATPNGANGNAAPGAQPNGRPRPGWGNGGAYGTSPSWRT
NT seq
5388 nt
NT seq
+upstream
nt +downstream
nt
atgacggtcactttcccatactcctctgcgcccgtcaagcaggtgaaagagattcaattc
ggcgtgatgagtccggaggagattaaagcgttctcagtggcaaagatcgagtacatggag
gtcatggatgacaatgggagacaaaaagtcggagggctgatggatcccaagatgggcacc
atcgaccgaaacttcaaatgtcaaacttgtctcgaaggtatggctgaatgtcctggacat
ttcggtcatatcgaactcgctcgaccggtctttcatcagggtttccttgtgaaggtgaag
aagatcctcgaatgcgtgtgttacagttgtggcaagctcaaggtcgacttgcgcgaccct
atggtcggtaacatcgtccgacgagtcaaagctcaacaccgtctaagagcgatctgggtt
ctcgcaaaggacaagagaatatgtgagaccgataccgtcgacgatgaaaacggagatgcc
accgcagagaacgagtatttggccgagcaacgagcggacaaggttactgggcatggtgga
tgtggtcacgagcagcctttgtggagaaagaaagcgctcaaattgaacggggtttggaag
ccaacagacaagggcgatgagacggcagaacctgaagaacgaagtgtgtcaccaggcgaa
atctataacatcctaaagaagatcccggcggaagaccttcacatcatgggtctcaacgcg
gagtatgctaggccagattggatgatcctaaccgttctccctgttcctcctgccgctgtt
cgaccctctatctcagtcgatggaggcgcgatgcgaagcgaggacgatttgacatataag
ctttcacaaatcatcaaattcaacggtgtcgtcagacggatggaggccgaaggtgtgcca
ccgagtgtcgtcaacgagcagtttgatctgcttcaatatcacgtggctacctacatggat
aacgacattgccggtttgcctcgagatcaacagaaaggcggtcgtgctatcaaagctatc
cgagctcgattaaaaggaaaggagggtcgtatgcgtggtaatctgatgggaaagcgtgtc
gatttctcggcccgaacagtcattactggtgacccaaatcttcaattggaccaggtcggt
gtacccaaaagtatcgctatgacgttgacctatcctgaacgagtaacgccatacaacatc
gtctatctacaaacactcgtaaataacggtcccgcaacataccctggtgcgagatattat
gttaaagacactggagagcgagtcgatctgaaataccgaaaatccggagaccctatcagc
ttgcaattcgggtggatcgtcgaacggcatctgaaggatggagacttcgtcttgttcaac
cgacaaccgagtttgcataagatgtcaatgatgtcacatcgcgtcaaactgatgaactat
tccacttttcgtcttaacctttcagttacctcaccttacaacgccgacttcgacggcgac
gaaatgaacttgcacgtcccgcaaagtgaagaaacccgagcagagctaagccagatcgct
tgggtgcctagacaaatcgtttcgccacaagcgaataaacctgttatgggtattgttcaa
gataccctctgtggtgtccggaaattcacgctccgagataacttcattgattggcttcaa
gtacaacacatccttctatggctgcccggatgggacggcacgataccgccgcccgccatc
ctcaagccgaaacctatgtggactggaaaacagctgttgtctatgactatccctaaggga
atcaacatcgcgtacaagaacaatgagaagccgtctccaattgatgtcactgacgagaac
gttttgatcgacgacggcgagcttatccacggaacgattgtcaagaatatggcaggaagt
gcgaacaacggtctcatccacgtaatcttccgagagcttggtcacatcgcttgtcgagat
ttcttttcggcttgtcagatgatggtcaacttctggttgctacatttcggcttctcggtc
ggaatcggagacacaatcgtcgacaaggcgactatggccggtatcaccaaccgaatggtt
gaagcgaaggaagctgtgcaaacgttgatcactgaagccgaagcgaataagatgaaaccc
aagcctggtatgactattcgagaaacgttggaagcttccatcgccaacgaattgaacaag
gctcgtgattggaccggtaaaacaactcaggacaatctgaaagacgataacaatgtgaag
caaatggttgtctcaggtgccaagggttcctttatcaacatttctcagatgtcgggtgtc
gtcggtcagcagttcgtggagggaaagcgtatacacttcggtttcagacatcgatctttg
ccgcacttctctcgagacgattatggacccgaatcgagaggtttcgtcgaaaactcttac
cttaggggtttaactcctcaggagttctggttccacgctatgggtggaagagaaggtctg
atcgatactgctgtcaagactgccgagaccggttatattcaaagaagactagtgaaggcg
atggaagatctaaaagtcgggtacgacgggacagtcaggaactctgtaggagacgttgtg
caattcctatatggtgaggatggtatggatggtgctgcaatggagaagcagagcttggac
atcatccgtctttcacatcgtgctttcgagcgacggtacaagattgacgtcattggtgca
actggcggcttctctcgtggcacactacaggccagcatcgatcagaattctgtgtcactg
caaaacttgctggacgatgagtaccgcctgcttagcgactaccgagagcaattacgatcg
gaggtgtacctggacggtaccccgggtcatccattacccgtcaatattcaacgtctcatc
caaaactcgcaacagatcttccacatcgatcctcgagttccgagcgacctcgatcccgtg
tatctgatcgagcagaggaaggcacttgcagaccgactaattgtggtgcgaggagatgac
aagctcagcaaggtcgcccaacggaacgcgacacttgttttccacatgctcctccattct
cacttggcgacgcgccgtgttctcgaagagtatcacctcaacaaggaggctttcgattgg
gttatcggagaagtggagcaaatattcaatcgggcggtggtcaatgccgctgagatggtc
ggcacacttgccgcgcaatcgatcggtgaaccggcaactcagatgacccttaacactttc
cattatgctggtgtggccagtaagagtgttaccggtggtgtgcctcgattgaaggaaatc
atcaacgttgctgtgaacatcagaacaccggcactgaatgtctatctcgaccgagaatac
agccggactgaagaagacgctcatcagatcatgcggaagctcacgtacactcgtctccgt
gatatcactgcttcggtcgagatcttctacgaccctaaactcgattcaacagatatcgag
gaagacagggacttcgtcgatgcgttctttgccatccccgacgaggacattcggttagaa
ctgcactctccgtggttgttgcggttggagttggatcgggcaaaggtgttggaaggagga
tatgagatgtccgagattgtcaacgccatcgcagccactgtcggcaaggacgtcttcgtg
atccactctgaagacaacgcgccaaaactgatcatccgtgtgcgaacggtggccgaagag
aaagaagaggagggtttactcggtgacgaggacatgttcctgaagagaatcgaaggaacg
ttgcttgaccaagttgagctcggtggtatcaccggtatccaacgagtgttcatttcggaa
ggaaagaaggtggtattgtcacaacagggcgaatatgatcaggagaaggagtggttcttg
gagacggatggaatcaacctgaaagaggtcatggcgattgatggtgtcgacgcgttccga
acatactcgaataactgttatgaagtttacgagacattggggattgagggcgcgaggaac
gccttgttcaaggaattgaacggtgttatcgagatgggtggttcttacgtcaactaccga
catctcgccttgctttgtgatctcatgtgtagtaagggctcgcttatgagtatcactcga
catggcatcaaccggacagacgctggagctctttcgagatcatctttcgaggaaaccgtc
gagatcttgctcgaggcggcagccgttggagatgttgatgactgtcgaggcgttgcggag
aatgtactactgggccaaatggcaccaatgggaactggtgctttcgatgtctcattggac
atgaacatgctcaaggacgtcattgtcgaccatcgattgcctgtgcaaaacatgttggca
gccggaggagccggagctatgactcctggtggagcaatgacgccttacgacaacttctcg
ccgatgtggaatggagacaaggtcacagtcggggctgcagccttctcgccaatgcaaacg
tcgaccaatgatgaaggtggaaacttcgcttacatgggttatggacaatcgccgatgcac
ggcgggatgtctcctggtggatactccccttcttctccagccggctactcgcccacgtcc
cctttcgccgtcacgagtccagcctacagtcctgcttctcccttccacagtggtggtgca
gcttcaccttgggttcctcgaggtggctatggggcaacaagccctgtctacagcccgacg
tcaccacagtattcgccttcttcccctcagttctctccatcttcgccatccttctcgccc
tcatcacctacatactcaccggcatcaccggcttatggtggatcaagggccggagccggc
tcccgcgcatcaccatactctcccgcttcacccgcatacagtcccacttcacctatggga
ggaatgggtgccacctcacctcagtattctcccacctcgccccgatactctccagcgagt
ccagcattttcaccgacatctccaacttattctcctacgtctcctgcggccttccaagcg
actagtcctcgatattctccagcttctccccaattcagtccgacgtcacctacatactct
cccgccagtcccgcatattccccagccagtcctgcttattcgccagcgagtcccgcgtac
agtcccgcttcaccagcgtacagtccggcctcaccgacttatggtggagatgcgaccccg
aacggtgcgaatgggaatgcggcgccgggagcacaaccaaacggtagaccgagacctgga
tggggcaatgggggcgcctatggaacttcaccgagttggaggacataa
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integrated database retrieval system
