Kwoniella newhampshirensis: 92180863
Help
Entry
92180863 CDS
T10314
Symbol
IAR55_003605
Name
(RefSeq) hypothetical protein
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
kne Kwoniella newhampshirensis
Pathway
kne03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
kne00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
92180863 (IAR55_003605)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kne03019
]
92180863 (IAR55_003605)
Enzymes [BR:
kne01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
92180863 (IAR55_003605)
Messenger RNA biogenesis [BR:
kne03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
92180863 (IAR55_003605)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clp1
CLP1_P
CLP1_N
AAA_16
AAA_28
MeaB
AAA_33
AAA_24
MMR_HSR1
ATP_bind_1
KTI12
Dynamin_N
Motif
Other DBs
NCBI-GeneID:
92180863
NCBI-ProteinID:
XP_066803104
LinkDB
All DBs
Position
6:complement(1202158..1204742)
Genome browser
AA seq
536 aa
AA seq
DB search
MAAGIPEQTIVELGAGSEWRFELEADENIAIRVLSPDPVFINSCELPPTTWYPLYRHLKS
SLYASKPARIEVSPTFPASQYTSTSTTQHQLLNLHLALERVRILAKRASNDGVSGVRGPR
VMILGPPSSGKSTVVKNLVNLALGTGMGWTPGVVGLDPSSPTNLIPGTLSLSTPALPLPT
HHLAQPLGSPPTSIPSNTLSADVPTVGWWLGGLEPTNRNAEVWKVLVSAMAQKWRDRCEK
DKLAMTSGLFVDTSSAFANPLLGTKKDDPKARYTLVAQAIEAFEIDTILVIGHEKLHIDL
SRLPAIQSRNLNIIRIAKSGGVVDLDETYRETAHSFMVRTYFYGEPSLTKEMTGLVGKMV
GMDGGLNPYSFQIGWETLVVLRVGEENAAPSSALPLGSSRTLSPTKLTRVDPSGPAHVVR
LLNTVLAIVAVSSEDRIIPEKHALKAEADAQVKAEAEEAEDGQGEDGGRVEAELVEEEDM
EEVPYREEIGTREVLGFIVITGIDPQKKKYTVLSPSPGKLPSTVAIAGSIEWVDSA
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atggcagcaggtatacctgagcagaccattgtggagcttggagccggctcagagtggcgg
ttcgagttagaagcagatgagaacatagctatcagagtcctgtccccggacccagtcttc
atcaactcatgcgagcttcctcctacgacatggtatcccctctatcgtcatctcaaatca
tcgctttatgcctctaaacccgcacgaatagaagtctctcctacgttccccgcttcgcaa
tacacttccacatcgaccacccagcatcagttactcaatctccatctggctttagaacga
gtacgaatactagcgaagagggccagtaacgatggcgtgtcaggagtcaggggaccaaga
gtcatgatacttggaccaccaagttcgggcaaatcgacagtggtcaagaatctggtcaac
ctagctctgggcacgggaatgggttggacccctggtgtggtcggattagatccttcaagc
ccaacaaatctcataccggggaccttgtctctctccactccggctcttcccttacctacc
caccacctggcccagcccttagggtctcctccgacgtctatcccttcaaacactctttcg
gctgacgtacctaccgtcggatggtggttgggtggtctagaaccgaccaacaggaacgcc
gaagtgtggaaggtattggtcagcgcgatggcgcaaaagtggagagataggtgtgaaaaa
gacaagttggctatgacttcggggttgtttgtggacacttcgagcgctttcgcaaaccca
ttgttggggacgaaaaaagatgatcccaaggcgagatacacgttggtcgcgcaggcgata
gaggcatttgagatcgacacgatcctggttatcggtcacgaaaaacttcatatcgatctg
tcgcgattacccgcgatccaatctaggaatctgaacatcatccgaatcgccaaatctggc
ggagtagtcgatctcgacgaaacatatcgagaaacagctcatagtttcatggtcagaact
tatttctacggagaaccaagtctgacgaaagagatgactggattggtgggcaaaatggtg
ggcatggacgggggattgaacccttatagtttccagattggatgggagaccttggtcgtt
cttagggttggagaagagaacgccgctccatcatcagctttaccactaggttcatcccga
acgctctcacctacaaaattgacccgagtcgatccatctggaccagcccacgtcgtcaga
ttactaaacaccgtacttgccatcgtggctgtgtcaagcgaagatcggatcatacccgag
aaacatgcgttgaaggctgaagcagacgcgcaggtcaaggctgaagcagaagaggcagag
gatggtcagggtgaggatggaggtagagtagaagcggagcttgtcgaagaggaagatatg
gaagaggtcccgtacagggaagagattggaacgagggaggtgttgggtttcattgtcata
accggtattgatcctcaaaagaagaaatatacggtcctctctcccagtcctggcaaactt
ccgtctactgtcgccatagccggatccatcgaatgggttgattcggcctga
DBGET
integrated database retrieval system
