Kwoniella newhampshirensis: 92181108
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Entry
92181108 CDS
T10314
Symbol
IAR55_003850
Name
(RefSeq) hypothetical protein
KO
K14284
nuclear RNA export factor
Organism
kne Kwoniella newhampshirensis
Pathway
kne03008
Ribosome biogenesis in eukaryotes
kne03013
Nucleocytoplasmic transport
kne03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
kne00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
92181108 (IAR55_003850)
03015 mRNA surveillance pathway
92181108 (IAR55_003850)
03008 Ribosome biogenesis in eukaryotes
92181108 (IAR55_003850)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kne03019
]
92181108 (IAR55_003850)
03009 Ribosome biogenesis [BR:
kne03009
]
92181108 (IAR55_003850)
Messenger RNA biogenesis [BR:
kne03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
92181108 (IAR55_003850)
mRNA cycle factors
Stress granule specific factors
92181108 (IAR55_003850)
Ribosome biogenesis [BR:
kne03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
92181108 (IAR55_003850)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NXF_NTF2
TAP_C
LRR_NXF1-5
UBA_8
LRR_4
NTF2
LRR_8
Motif
Other DBs
NCBI-GeneID:
92181108
NCBI-ProteinID:
XP_066802335
UniProt:
A0AAW0YYC2
LinkDB
All DBs
Position
7:complement(358504..361428)
Genome browser
AA seq
665 aa
AA seq
DB search
MAAFQQALANFNSSKNTEQNGPTASGSSLSIRGTANGAPSARGLATALRGAGISREQQME
LDGTSGGKIGRGAGRRTGGRSGGPLDQTGRHHPPNNNSNNSKPYQKPLTAANLAARMSSG
SSTGRGGRPAPRNGGHPGRQPAGTPPTIQQLRVPNKAERDHAKSELNKKLHSDEMKAWLR
SKMISEGVLDMSGLVDDPWLKENGILPPGHPNAPTSAGLVFWRLIDEVFQKAASITIHTL
SLANNNLDHLRQLEKLPMWLPHIRALDLSRNPIRSFNELDNIRAAGEKKGKANAGAGSLK
SLIELKLNDCQFREKTLQQPDGPAVYKHEILRRFPGLRILDGVSLERVIFPIDRKPKVRE
TEAEKAALVAKPFTFPFDVQPFFFEQDAARQFAMEFCAKFFALFDNDRNATLIGYAPDAL
ISISANTLPSRSFLQQDVQKTRSNRPQPVSFEAWTNLPSRNFLRNVSSIKQRMDTLQFAS
DPERLLRWWNKNVPKTRHPLEDAKKWCIESWVLDGEGVDVRLCLMVQGEFEEMPSGTYRS
FSRTFILVDAPQGSPARNAGWPALVLSDTMIVHSYLGTGAFDDNRSLAVHGVAIQPPASV
APATAAPVSDIPQAQQEALLAQLSQRTGMNAQFSGMCLAQNGWDFEAAVKNYEEIKTSIP
AEAYQ
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atggctgcttttcaacaagctcttgccaacttcaatagcagcaaaaacaccgagcagaat
ggacctacggcttctggttcctcactgtctattcgaggcaccgccaatggagctcccagc
gctcgtgggctcgcgacagcgctgaggggagcgggcatatcaagagagcaacagatggaa
ttggatggcacgtcgggagggaaaatcggaaggggcgctggtcgacgaacgggtggcagg
tccggtggaccacttgatcagactggccgacatcacccgccaaacaacaattcaaacaac
agcaaaccatatcagaaaccgctcactgctgcgaatctcgccgcgcgcatgtcttctggc
agctcgactggtcgcggcggtcgaccggcccctcgtaacgggggacatccgggccgacaa
cccgccggcacacctcctacaatacagcaacttcgagtgcctaacaaggccgaacgggat
catgcaaagtcagagctgaacaagaagttacatagcgatgaaatgaaggcttggttgagg
tcgaaaatgatctcagagggtgtccttgacatgtcgggactcgtcgacgatccctggctg
aaggagaatggcatcttgccgcctggacacccaaatgcgcctacttccgctggtttagtg
ttctggaggttgatcgacgaggtctttcagaaggctgcttccatcaccatccacaccctc
agtctcgccaacaacaacctcgaccatcttcgacagcttgagaaattgcccatgtggctc
cctcacattcgagcgctggatctcagccgcaatccgatcagatcttttaacgaactcgac
aacataagggctgcgggcgaaaagaagggcaaggccaacgcgggcgcgggtagcttgaaa
agcttgattgagttgaaattaaacgattgtcagtttcgcgaaaagactcttcaacagccc
gatggtcctgcggtctataaacatgagattttgcgtcgattccctggtttacgcatcctt
gacggagttagccttgaacgtgtgattttccccattgaccgaaaaccaaaagtacgagaa
accgaagcggagaaagcggcactcgtcgccaaaccattcacattccccttcgatgtccaa
cctttctttttcgagcaggatgctgcaaggcagtttgcgatggaattctgcgcgaaattc
tttgcgctgtttgacaatgaccgcaatgcgacattgattgggtacgcaccagacgctctc
atttccatctccgccaacacgctaccctctcggtctttccttcaacaagacgtgcaaaaa
acacgatccaaccgacctcaaccggtctcttttgaggcatggaccaacttgcctagtcga
aacttcctccggaacgtcagcagtatcaaacaacgaatggatacactacaattcgcttcg
gatcctgagagattgctccgatggtggaacaagaacgtgcccaagacgagacaccctttg
gaggatgcaaagaagtggtgtatcgagtcatgggtgttggatggggagggcgtggatgtt
cgattgtgtctgatggtccaaggcgagttcgaagaaatgccttcgggaacatatcgatcg
ttctcgcgaaccttcatcctggtcgatgcgccacaaggctctcctgcacgaaatgccggc
tggccggctctcgttctgtccgacaccatgatcgtccacagctatcttggtactggcgcg
tttgacgacaatcgatctcttgccgtccatggagtagctattcagcctccagcctcagtc
gctcctgccacagctgccccagtttcggatatccctcaggcccaacaagaagccctactg
gcgcaactctcacagcgaaccggtatgaacgcgcaattctctggcatgtgcctcgctcag
aatggttgggactttgaagcggcggtcaagaattacgaggagatcaaaacatcgatcccg
gcggaggcgtaccaatag
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