Kwoniella newhampshirensis: 92181283
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Entry
92181283 CDS
T10314
Symbol
IAR55_004025
Name
(RefSeq) hypothetical protein
KO
K12828
splicing factor 3B subunit 1
Organism
kne Kwoniella newhampshirensis
Pathway
kne03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
kne00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
92181283 (IAR55_004025)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
kne03041
]
92181283 (IAR55_004025)
03036 Chromosome and associated proteins [BR:
kne03036
]
92181283 (IAR55_004025)
Spliceosome [BR:
kne03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
92181283 (IAR55_004025)
Complex B
92181283 (IAR55_004025)
Complex C
U2 SnRNP specific factors
92181283 (IAR55_004025)
Chromosome and associated proteins [BR:
kne03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
92181283 (IAR55_004025)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SF3b1
TOR1L1_N
HEAT_EF3_N
HEAT_ECM29
HEAT_2
Vac14_Fab1_bd
HEAT_EZ
HEAT
PPP2R1A-like_HEAT
IFRD
Adaptin_N
TIP120
MMS19_C
Cnd1
Motif
Other DBs
NCBI-GeneID:
92181283
NCBI-ProteinID:
XP_066802507
UniProt:
A0AAW0YLH2
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All DBs
Position
7:857327..860885
Genome browser
AA seq
1054 aa
AA seq
DB search
MADPYPTLQSYTAPQEILDEHAELADEEDAPDAFDDKARSKQVAARQSDYHLRRFNRQEG
QGEGEDESYEDRMRRINLQKEEERVRRFKEQLEKDKGQDEKMMVDDKTPPREIAGGDTPP
RGAAEDTPPRDLAGGDTPPRDVKKRRWDVEEVKEEPGTTKRRSRWDQTPAEVPEKKRSRW
DQTPAASTSTSTIVPAPSASGVMMVEDKRYRRMTDEELDSLLPGGEEGYAVVLVPDDYKP
GPSVRKMVPATAETGFMMQDEADAARARAAAGGMQGSTEQTEIEGIGTLQFLKPEDTQYF
AKVLGEGGGEEDDAAYTVEELKERKIMRLLLKIKNGTPPVRKTALRQITDRAREFGAGPL
FDKILPLLMERTLEDQERHLLVKVIDRILYKLDDLVRPYVHKILVVIEPLLIDEDYYARV
EGREIISNLAKAAGLAHMISTMRPDIDHVDEYVRNTTARAFSVVASALGIPALLPFLRAV
CRSKKSWQARHTGIRIIQQIAIMMGCAILPHLRNLVDAIADGLQDEQQKVRTMTALALAA
LAESAAPYGIESFDNVLKPLWLGIRQHRGKTLAAFLKAIGYIIPLMDPEYAGYYVRECMP
ILIREFQTSDEEMRRIVLQVIKQCASTEGVTPTYIKEEVLPEFFKAFWVRRMALDKRNYK
QLVDTTVELANKAGVSEIVSRVCNDLKDESEPFRKMVMETVTKVVANVGAADIDERLEVL
LIDGIIFAFQEQTLEDTVMLDGFATVVNALGGRVKPYLPQIVSMILWRLTNKSAKVRMLA
ADLTTRLAPIIKSCGEDMLLSKLGVVIFEQLGEDLIAAEGAIANVVGMTQMNPPVKDLPD
RGAEFVPAKEWMRICFELLDLLKAHKKAIRRAAVNSFGYIAKAIGPQDVLSVLLTNLKVQ
ERQSRVCSTVAIALAFVFEYVGEMSKDYIHSVVGLLEDALTDRDHVHRQTACAIVKHLAV
GVAGLGYEEALTHLLNLVWPNIFETSPHVIGGVMDAIEAMRLGIGPGPVLSYVLQDTLIL
GASDAMVPFYPALGSAADLASGQDYTRHQLMMWI
NT seq
3165 nt
NT seq
+upstream
nt +downstream
nt
atggcggacccatatccgacgctccagtcgtacacggctccccaagagattctcgatgag
catgccgagctcgcagacgaagaagacgccccagacgccttcgatgacaaagctagatct
aaacaggtagccgccaggcagagcgattatcatctacgtcgtttcaatcgacaggagggt
cagggagagggagaggatgagagctatgaggacaggatgagaaggatcaacttgcagaag
gaagaggagagggtgagacgtttcaaagagcagctggagaaggacaaaggacaggatgag
aagatgatggtggatgataagacaccacctagggagatcgctggcggggacactccaccc
agaggtgctgcagaagacacaccgcctcgagatctggctgggggcgatacaccacctcgg
gatgtcaagaaacgacgttgggatgtggaagaggtcaaggaagaacctggcacgaccaag
cgacgttcgcgttgggaccaaacaccagcagaggttcccgagaagaaacgatcacgatgg
gatcagacaccggctgcttctacttcaacatccaccatcgtacccgcgccgtctgcatcc
ggtgtgatgatggtggaggacaagcgataccgacgaatgacagacgaagagttggacagc
ttgcttcccggtggcgaagagggttatgctgtggtccttgttcccgacgattataagcct
ggtccttccgtgcgtaagatggttccagcgaccgccgagaccggattcatgatgcaggat
gaagcggatgctgcccgagctcgtgctgccgctggtggaatgcaaggatcaacggagcaa
accgagattgaaggcataggaacacttcagttcttgaaacctgaggacacacagtacttt
gcaaaggtattgggcgagggcggtggcgaggaggacgacgcggcttacacggtggaggag
ttgaaagagaggaagatcatgcggcttttgctcaagatcaagaacggaacaccgccagta
cgaaagaccgctctgcgtcaaatcaccgatcgagcgagggaattcggcgctggaccgctg
ttcgataagattctgcctctcctcatggaacgtactcttgaggaccaagaacgacatctc
ctcgtcaaggtcattgaccgaattctttacaaactggatgacttggttcgtccatacgtt
cacaagatcctcgtcgtcattgagccccttcttatcgatgaggattactacgcacgtgtc
gaaggtcgagagatcatatcaaacctcgccaaggcagccggtctcgctcacatgatctct
acgatgcgaccggatatcgatcacgttgacgagtatgtccgaaatacgactgctcgtgct
ttctcggtcgtcgcatctgcgcttggtatacccgctctccttcccttcctccgagccgtt
tgtcgatcgaaaaagtcatggcaagctcgacacactggtatccgtatcatccaacagatt
gccatcatgatgggttgtgccattcttccacacctgcgtaatcttgtggacgccattgcc
gatggtctacaagacgagcagcaaaaagtcagaaccatgaccgctcttgctctagccgcg
ttggcagagtctgcagccccttacggtatcgagtctttcgacaatgtgctcaaacccctc
tggcttggtattcgacaacatcgtggcaagaccttggcggcgttcctcaaagccatcggt
tatatcatccccctcatggatccagagtatgccggctactacgtgcgagagtgtatgcct
atcctcatccgagagttccaaacttcggatgaggaaatgcgtagaatcgtgcttcaagtc
atcaagcagtgtgcttctactgaaggtgtcaccccgacctatatcaaagaggaagtgctt
ccggagttcttcaaagcgttctgggttcgtcgtatggctctggacaagcgaaactacaag
caactcgtcgacacgaccgtcgagctcgcaaacaaggctggtgtctcggagatcgttagt
cgggtttgcaatgacctcaaagacgaatccgagccgttcagaaagatggtgatggagact
gtcacaaaggtcgttgcgaatgtcggtgctgctgatatcgacgaacgactcgaggttctc
ctgatcgacggtatcatcttcgcattccaggagcagacactcgaagataccgtcatgttg
gatggttttgcaacggtagtaaacgcgctcggtgggcgcgtcaagccgtaccttccacag
atcgtttccatgatcttatggcgattgacaaacaaatcagccaaggttcgaatgctcgcc
gcggatctcacaacacgactcgctcctatcatcaagagctgtggagaggatatgttactc
agcaagcttggtgtggtcatcttcgaacaacttggagaggatcttatcgccgcggaagga
gccatcgccaatgtcgtgggaatgacccaaatgaacccccctgtcaaggatttacccgat
cgtggtgccgagttcgtccccgcaaaggagtggatgcgtatttgtttcgaactgctcgat
cttctcaaggctcacaagaaggctattcgacgagctgccgtcaattcgttcggttacatc
gccaaagccattggtccacaagatgtcctcagcgtgttgttgaccaatctgaaggtgcag
gagcgacaaagtcgtgtctgcagtaccgttgctatcgctcttgctttcgtatttgaatac
gtcggcgagatgtcaaaggactacatccactcggtggtgggtctgctggaagacgcgttg
acggatcgtgatcacgttcaccgacaaacggcctgtgccatcgtgaagcatcttgccgtt
ggtgtcgccggtcttggttacgaagaagctctcactcatcttctcaatcttgtttggcca
aatatctttgaaacgagtcctcacgtgattggtggtgtcatggatgccatcgaggctatg
cgtttaggtattggaccgggtccagttctctcttacgtcctgcaagacactctcatcctc
ggtgcatccgacgcgatggtacccttctaccccgcccttggttctgctgccgatttggct
tctggtcaagattacactagacaccagcttatgatgtggatttaa
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