KEGG   Kwoniella newhampshirensis: 92181607
Entry
92181607          CDS       T10314                                 
Symbol
IAR55_004349
Name
(RefSeq) hypothetical protein
  KO
K03013  DNA-directed RNA polymerases I, II, and III subunit RPABC1
Organism
kne  Kwoniella newhampshirensis
Pathway
kne03020  RNA polymerase
kne03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:kne00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    92181607 (IAR55_004349)
  09124 Replication and repair
   03420 Nucleotide excision repair
    92181607 (IAR55_004349)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:kne03021]
    92181607 (IAR55_004349)
   03400 DNA repair and recombination proteins [BR:kne03400]
    92181607 (IAR55_004349)
Transcription machinery [BR:kne03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     92181607 (IAR55_004349)
  RNA polymerase III system
   RNA polymerase III
     92181607 (IAR55_004349)
  RNA polymerase I system
   RNA polymerase I
     92181607 (IAR55_004349)
DNA repair and recombination proteins [BR:kne03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      92181607 (IAR55_004349)
SSDB
Motif
Pfam: RNA_pol_Rpb5_C RNA_pol_Rpb5_N NA-iREase1 Mrr_cat
Other DBs
NCBI-GeneID: 92181607
NCBI-ProteinID: XP_066801862
UniProt: A0AAW0YK07
LinkDB
Position
8:complement(<388377..>389643)
AA seq 208 aa
MSQESDRELARLWRVSRTVHEMIRDRGYLLADYEINVAFDEFKQKHGATGSVDRTNMSFD
AIHSENSEKIFVYFCSEKNVSKASMKTFIGSMDKMGARRGMIIWSEKMSPAAKKTLTEMG
SEYSLEDFPESDLLVNITRHFLVPKHVIMRPEEKLALIKRYRLKETQLPRIMITDPVARY
YGMKRGQVMKIERASETAGRYITYRICM
NT seq 627 nt   +upstreamnt  +downstreamnt
atgtcacaagaatcagacagagaattggctcgactttggcgtgtctcaaggacggtgcac
gagatgatccgagataggggatatttacttgccgattacgaaatcaatgtcgcatttgac
gagttcaagcaaaaacacggagcgacaggttcagtcgaccgaaccaacatgagtttcgat
gcgatccactcggagaattcggagaagatattcgtctatttctgttcggagaagaacgtc
agcaaggcttcgatgaagacgttcatcggctcgatggacaagatgggagcgagacgaggg
atgatcatctggagtgaaaagatgtcaccggccgctaagaagacattgacggagatgggt
tccgagtactcgctggaagatttccccgaatcagatctattggtcaacatcacgagacat
tttctcgttcccaaacacgtcatcatgagaccagaggagaaactagccctcatcaaacga
taccgattgaaagagactcaattaccgagaatcatgatcacggatccggtggctcgatac
tatgggatgaagcgaggtcaggtgatgaagattgaaagagcgagtgagacagctggtcga
tatatcacataccgtatctgtatgtga

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