Kwoniella newhampshirensis: 92181656
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Entry
92181656 CDS
T10314
Symbol
IAR55_004398
Name
(RefSeq) hypothetical protein
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
kne Kwoniella newhampshirensis
Pathway
kne03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
kne00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
92181656 (IAR55_004398)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kne03019
]
92181656 (IAR55_004398)
Messenger RNA biogenesis [BR:
kne03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
92181656 (IAR55_004398)
mRNA degradation factors
5'-3' decay
Decapping complex
92181656 (IAR55_004398)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAT1
Motif
Other DBs
NCBI-GeneID:
92181656
NCBI-ProteinID:
XP_066801911
UniProt:
A0AAW0YX44
LinkDB
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Position
8:<542715..>545767
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AA seq
843 aa
AA seq
DB search
MSGFFGFDAALPERRPGQGGGDSTRQQFSGFQASNADETFALSGAGEEEDLAVYTWGEGM
GGGLLEGGDELNDETFGDVGEINNDFQFSSQPAQQPAKPSYTQSSGRGPIASTQSRYKPK
PVADPFAFSEDDFYSSRPSTKKPVANKAPSRPKAQTGHSGSVENLWNKPAAPSPAWGTAP
SSLTKPTPPPASYSSYPSQSSGPPGHIKTLEEIEAEMSQLDVTGPSAQTLPSQPKVLSLE
EVEKQMMESLEPPRQPTPQQFAALPREATPSTVPGLPGSGYANQQALLDSMFPELGKAAL
PLQHPGSFPPGAEGIPPPAGPSPEEIARMEAIHKRISAKIESMAQHNNLMGSSDKDFITR
IQLSQLATADPYTSDFYAQVFSALKRSRMAAEGQGDGPTVVPVAAGLGLGVGGPVGNRFG
KMGSNTMQKLSTQVKKLVENRAQHQKVMNTAALQGALGRVTRGNAAAPRPVLAIPTSNKP
EHRAASHLNEQTGIHRAALTRKQIMFALEELYDAVLELEQMRREAPPPTAMQEIEVWHAR
CQTKVDIIWRRLMVMEPLDVSNPHPFIALINPVKGQRLFPRLLRHLPHNQSITMLSLLIA
TYPQLDVVARAPPPPVADASLLTKADRLDRAKREAETDNFLHCIIPGVDMIINRCGLGLV
AGMLAISAQRSEVWKVAATRPGVALYTALLSKAQSLIRAPAPDPMNPQQNQSPDPAEVEQ
WTKTFTYFLHVLLPHLPELFPSSVAQKAAFGPGAYLLGGDAIGEREAVEMERREAEVWGF
AAALAVNAAEEEQTTLVAALREKILHTVQAARNPATGPIRSEIKLRNVNMFLNGLGLDAA
MIE
NT seq
2532 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggtttctttggcttcgatgccgctctacctgagcgcagaccaggtcaaggagga
ggcgattcaacccgtcaacagttctcaggattccaagcgagcaacgccgatgagacgttc
gctctgtccggtgctggggaagaggaggatctagctgtgtatacatggggagaagggatg
ggcggtggattactggaaggaggggatgagctgaatgatgagaccttcggtgacgttgga
gagatcaacaatgatttccagttttcgtctcaaccagcccaacaacctgcgaagccttcc
tatacccagtcgtccggtcgtggtcccatcgcttctactcaatcacggtataagccaaaa
cccgtcgccgatcctttcgcattctccgaagacgacttctactcctctagaccttctaca
aagaagcctgtagctaacaaggcgccctcgagaccgaaagctcagactggtcattctgga
tcggtggagaatttatggaataagcctgctgcaccaagtcctgcgtggggtaccgctcct
agctctttgacgaaacctacaccccctcccgcatcgtattcatcgtatccgtcccagtct
tctggtccacccggacacatcaaaaccctcgaggagatcgaagcggagatgtctcagctg
gatgtgaccggtccttccgcccaaaccctgcccagtcaaccaaaggtgctgtccttggag
gaggttgaaaagcagatgatggagtcccttgaaccgcctcgacagcctactccacaacaa
tttgctgctcttcctcgagaagctacgcctagcaccgtacccggtcttcctggatcgggt
tacgcgaatcaacaagcgttactcgatagtatgttccctgagcttggaaaggcagctctc
ccgctccaacatcctggctccttccctccaggcgcagagggcattcctccccctgctggt
ccttctcctgaagagattgcgcgaatggaggctattcacaaacgtatctcagcaaagatt
gagtccatggctcaacataacaatttgatgggatcctccgacaaagatttcataacccgt
attcagctgtctcagctcgctactgccgatccatacacctcggacttctacgctcaggtc
ttctcagccctgaaaaggagtcggatggctgctgagggccaaggagatggacccacggtt
gtaccggtcgcggctggactgggcttgggtgtcggaggtcctgttggaaatagatttgga
aagatgggctcaaataccatgcagaagctttccacccaggtgaagaagctcgtagagaac
agggctcagcatcagaaggtgatgaacaccgctgctctgcaaggtgccctcggtcgggtc
actcgaggaaacgccgctgctcctcgaccggttctcgctatccctaccagtaacaagccc
gaacatcgtgccgctagtcatctgaatgagcagaccggcattcacagagcggctctaact
cggaagcaaatcatgtttgccctcgaggagctgtacgatgctgttctcgagctcgagcag
atgcgcagagaagcaccaccgcctactgcaatgcaagaaatcgaggtttggcatgctagg
tgtcagacaaaggtggatatcatctggagaaggttaatggtgatggaacctctggacgtc
agtaaccctcacccattcatcgccttgattaaccccgtcaaaggacaacgcctcttccct
cgtcttctacgtcacctgcctcacaatcagagtatcacaatgctcagtctcctcatcgcc
acatacccccagctcgacgtagtcgctcgagcccctccaccacccgtcgcagacgcctct
ttactcaccaaggcggaccgtctcgaccgtgccaagagagaagcggaaacggacaacttt
ttgcattgtatcattccgggagtcgacatgatcatcaacagatgtggtctgggcctagtg
gcaggtatgctggctatctctgcccagagatcagaggtttggaaggtagctgcgacgaga
cccggtgtggctctgtacactgcgttgttatcgaaagcacaaagtctgattcgagctcct
gctcccgaccccatgaacccacaacaaaatcaatcaccagatcctgcggaggtggagcaa
tggaccaaaacttttacctacttccttcacgtcctcctccctcacctccccgaactattc
ccctcttcggtcgcacaaaaagcggctttcggtcctggagcgtatctgctgggcggcgac
gctatcggtgaaagagaagcggtcgagatggaaagacgagaggcggaggtttggggcttt
gcagccgctcttgcagtcaatgctgcagaggaagagcagactaccttggtggctgccttg
agagagaaaatcctgcatactgttcaagctgcacgaaatcccgccactgggccgatcaga
tcggagatcaagctcagaaacgtcaacatgttcttgaacggtttaggtctcgacgctgcg
atgatcgagtag
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