Kwoniella newhampshirensis: 92181776
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Entry
92181776 CDS
T10314
Symbol
IAR55_004518
Name
(RefSeq) hypothetical protein
KO
K14326
regulator of nonsense transcripts 1 [EC:
5.6.2.5
5.6.2.3
]
Organism
kne Kwoniella newhampshirensis
Pathway
kne03013
Nucleocytoplasmic transport
kne03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
kne00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
92181776 (IAR55_004518)
03015 mRNA surveillance pathway
92181776 (IAR55_004518)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kne03019
]
92181776 (IAR55_004518)
Enzymes [BR:
kne01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
92181776 (IAR55_004518)
5.6.2.5 RNA 5'-3' helicase
92181776 (IAR55_004518)
Messenger RNA biogenesis [BR:
kne03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
92181776 (IAR55_004518)
mRNA cycle factors
Common to processing body (P body) and stress granule
92181776 (IAR55_004518)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF1_Zn_bind
AAA_12
AAA_11
UPF1_1B_dom
AAA_30
AAA_19
UvrD-helicase
ResIII
SLFN-g3_helicase
Viral_helicase1
NPHP3_N
DEAD
AAA_22
Helicase_RecD
Ribosomal_S13_N
nSTAND3
AAA_16
PhoH
UvrD_C_2
AAA_25
ATPase
T2SSE
Motif
Other DBs
NCBI-GeneID:
92181776
NCBI-ProteinID:
XP_066802030
UniProt:
A0AAW0YX45
LinkDB
All DBs
Position
8:complement(876426..880433)
Genome browser
AA seq
1079 aa
AA seq
DB search
MEFSNFEGASQYGADLDDTTSVYSAIPNSVINAHAPSTINGDDLSSQLGDMSLNHGHGHG
HGVVNGYGGVGGGIGEEEFEERERAMLGVGVEHACSYCGVHNPQCVVKCLHCSKWFCNSR
GNTSASHIVNHLVKAKHKEVVLHKESALGETIPECYNCGSKNVFMLGFIPAKSDTVVVLL
CRQPCAALTNSRDINWDTSQWSAIIDDRSFLSWLVKVPSEAEQLRARQISLAQIAKLEEL
WRENPEAKLEDAEAQSGEEEMQPILLRYEDAYQYQNIFGPLVKIEADYDKRMKESQTEND
ITIRWDMGLNQKRLAWFCMPKLESGEVRLAVGDELRLKFVGNSSSMGGVKGMQAFAKGGW
GGGGDWEGIGSVVKIPNNVSDEICLELRRNDGVPADCTHGFSVDFVWKATSFDRMQAAMK
TFAIDEKSVSGYIYHKLLGHELEPQVLRTQMPKRFSAPNLPELNHSQMAAVKAVLQKPLS
LIQGPPGTGKTVTSASIVYHLAKMNPGQVLVCAPSNVAVDHLCEKIHQSGLKVVRLAAKS
REALDSNVAFLSLHNQVANADTHPELQKLIQLRNDQGELSQSDERKYKSLVRACEKDILN
AADVICTTCVGAGDPRLAKFKFRTVLIDEATQSAEPECMIPLVMGCKQAVLVGDHQQLGP
VIMNKKAARAGLSQSLFERLVILGNRPIRLQVQYRMHPCLSEFPSNMFYEGTLQNGVTAP
ERLRKNVDFPWPVSDTPMFFHQNLGTEEISSSGTSFLNRTEASNVEKMVTKFFKSGVLPS
QIGVITPYEGQRSYVASYMQLHGSLKKELYKEVEVASVDAFQGREKDYIILTCVRSNEHQ
GIGFLNDPRRLNVALTRAKYGVVILGNPKVLSKHPLWLYLLTHFKEKSCFVEGPLSNLQP
SMIQFSRPKKSLAAAMDPFKAREAPASEYLDKPAGRVPGPAAGRFDPAYYRTHNAMSFVP
PDAQSVVSQALTSSSAFPLFPGGNKGKSYTGYASSVISQQPTDTLALPRDGNGNGNGVGG
IGYSQFDRLGGVGAQHDKGGRRMSIGSEAASASMYAYGYKGGEDDVQSIAPSQAGMTEF
NT seq
3240 nt
NT seq
+upstream
nt +downstream
nt
atggagttctcaaatttcgaaggtgcatcgcagtacggagccgatctggacgatactact
tcagtatattccgctatcccaaattccgtcatcaacgcccatgccccgtcaacgatcaat
ggcgatgacttatcaagtcagttgggcgatatgagtctgaaccacggacatgggcatgga
catggggtcgtgaacggatatggtggcgtgggtggtgggataggtgaggaggaatttgaa
gagagggaaagggcgatgttgggagttggggttgaacatgcttgtagctattgtggagtt
cataatcctcaatgtgttgtaaagtgtctacactgtagcaaatggttttgcaattctcga
ggaaacacgtccgcatcacatatcgtgaaccacctcgtcaaggcgaaacacaaggaggta
gtattgcacaaggagagcgcgttgggagagactattccagaatgttacaactgtggcagc
aagaacgtttttatgttgggcttcatccctgcgaaaagtgataccgtcgtcgtcctcctt
tgtcgtcaaccatgtgctgctctcaccaactctcgtgatataaactgggacacgtctcaa
tggtctgcgatcatcgatgatcgatccttcctctcttggctggtcaaagtaccctccgag
gcggaacagctacgagcgaggcagatctcccttgcgcaaatagccaagttggaggaactg
tggagagaaaatccagaggccaagctggaggatgccgaagcacaatcgggcgaggaggag
atgcagcctatattgctcagatacgaggacgcatatcagtatcagaacatttttggacct
ctcgtcaagatcgaggcagattacgacaaacggatgaaggaatcacagaccgagaacgat
atcaccatacgatgggatatgggtctcaaccaaaagcgactggcctggttctgcatgccc
aaactggagagtggggaagtcagattggccgttggtgatgagttgcgattgaagttcgtc
gggaacagcagtagtatgggaggagtcaaggggatgcaagcattcgcgaaaggcggatgg
ggtggtggcggagattgggagggtatcggaagtgtcgtcaagatcccaaataacgtttcg
gacgagatctgtctcgagctgaggcgaaacgatggagttcctgcggattgcacccatggc
ttctcggtcgatttcgtgtggaaagcgacaagtttcgacaggatgcaagcggcgatgaag
acgtttgccatcgacgaaaagagtgttagtggttacatctaccacaaacttctcggacac
gaactcgaacctcaggtcctgcgaactcagatgccgaagcgattctctgcgcctaacctt
cccgagctgaatcattcccagatggctgcggtcaaagcggtattgcaaaaaccgcttagt
ctgattcaaggaccgcccggtactggtaaaaccgtcacctccgcctctatcgtttatcat
ctcgcgaaaatgaacccgggtcaagtccttgtttgtgccccttcgaacgtagcagtcgat
catctttgtgaaaagatccaccagtcaggtttgaaggttgtccgactggctgccaaatca
cgagaagctcttgactccaacgtcgccttcctgtcgcttcacaatcaagtcgcgaatgcc
gacacacaccctgaacttcaaaagcttatccagctcagaaatgatcaaggtgaattgagt
cagagcgatgagaggaaatataagagcttggtcagagcctgcgagaaggatatcttgaat
gcggcggatgtgatctgcacaacatgtgtcggtgctggcgatcccagattggcgaaattc
aagttccgcaccgtcttgatcgatgaagccactcaatcggctgaaccagagtgtatgatc
cccttggtcatgggatgtaagcaagctgttcttgtcggagatcatcaacagctcggtcca
gtcatcatgaataagaaggcagctcgcgcaggcctttcgcaatcacttttcgagcgactc
gtcatccttggcaatcgacctatccgactgcaggtgcaatatcgaatgcacccctgtctt
tctgaattcccttcgaacatgttctacgagggaacacttcaaaatggtgtcaccgcgcca
gagagattacgaaagaacgtcgatttcccgtggccggtcagcgacacgcccatgttcttc
caccagaatcttggaaccgaggagatttcttcgagtggaacttcattcttgaataggaca
gaggcgtcaaacgtcgagaagatggtgaccaaattcttcaagtctggtgttctgcccagt
caaatcggtgtcattacgccatatgagggtcagcgatcatacgttgcttcgtacatgcag
ctccacgggtcgttgaagaaagagttatacaaggaggtggaagtggcgagcgtcgatgcg
ttccagggtagagaaaaggactatatcatcttgacttgtgtgagaagcaacgagcaccag
ggtattggtttcttgaacgatccgagaagattgaacgtcgctctgaccagagcgaagtac
ggtgtggtcatcttgggtaaccccaaggtcttaagcaagcatcccctttggctctatctg
ttgacacacttcaaggagaagtcgtgcttcgtcgagggtccgctcagcaatctgcaaccg
agtatgatccagttcagtcgaccgaagaagtcactagctgctgcaatggatcctttcaag
gctcgcgaagctcctgcgagcgaatatcttgataagcctgccggccgagtacctggtcct
gcagcaggtcgattcgatccggcctactaccgaacccacaacgccatgtcattcgttcct
cccgacgctcaatcagtggtcagtcaagccttgacgagcagctctgcgttcccactcttt
ccaggtggcaacaaaggaaaatcatatactggttacgcgtcgtcggtcatttcacaacag
ccgacagacacccttgctctacctcgtgatggcaatggcaacggaaatggtgttggtggg
attggatactcacaattcgacagacttggaggtgtcggagctcaacacgataaaggtgga
aggaggatgtcaattggaagtgaagcggcgagtgcttcaatgtatgcttatggctacaaa
ggtggagaagacgatgtgcagagtatcgcaccgagtcaagcgggcatgacggaattctga
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integrated database retrieval system
