Kwoniella newhampshirensis: 92182893
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Entry
92182893 CDS
T10314
Symbol
IAR55_005635
Name
(RefSeq) hypothetical protein
KO
K12854
pre-mRNA-splicing helicase BRR2 [EC:
5.6.2.6
]
Organism
kne Kwoniella newhampshirensis
Pathway
kne03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
kne00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
92182893 (IAR55_005635)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
kne03041
]
92182893 (IAR55_005635)
Enzymes [BR:
kne01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
92182893 (IAR55_005635)
Spliceosome [BR:
kne03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
92182893 (IAR55_005635)
Complex C
U5 SnRNP specific factors
92182893 (IAR55_005635)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec63
DEAD
WHD_SNRNP200
Helicase_PWI
ResIII
Helicase_C
BRR2_plug
AAA_22
ASCC3_N
CDC45
Motif
Other DBs
NCBI-GeneID:
92182893
NCBI-ProteinID:
XP_066800499
UniProt:
A0AAW0YGY0
LinkDB
All DBs
Position
12:123933..130929
Genome browser
AA seq
2159 aa
AA seq
DB search
MSGQGQKKAGARDLSGFNYGAMSSLVVNQDRSVLRTDEPTGTAESLVGRINLKDMGSRVT
RETPKDLEKKKAKAKLTSADEVERSIRRAQERSTARFGAADVLESVAQLEGLRYRPRTAE
TREVYELLLGLVHQTLGDQTQEVVRSAADTVLESLKSDDLKEFDKRKEVESVLGPVKEET
WNQLVNLGKKVTDYEEEDEALQGDDRQQAVDQEGVAVLFEDEDEDDDEGNFEVKQGDSED
EDEDEEDEDEDAEGSDEEDEAMDEDDALVLGKETTRTKSKSDKVSPHEVDGFWLQRLIAA
SYTDPVQSADFTAKALDFLGSEAELRDLENSLAEMFGYENFELVTTLTKNRDVIVWCTKL
ARSSEEEKQDVEVAMREKGVGWILRELRGGRDKDTSGKQPEMTVSTKATLAPGSVAQPRR
VIDIDSLIFTEGGHLMSRKKVKLPEGSFKRQMKGYEEIHVPEPKRREIVPGELVSISQMP
DWTHPVWASVNTTKLNTIQSKVFPIAFETNEPMLICAPTGAGKTNCAALAILRCISQFLD
PETGYIDRDAFKIIYVSPMKALVQEQVAAFSKRFSALDIRVAELTGDSQLTKQQISETQI
IVTTPEKWDVITRKSTDTSYTNLVRLVIVDEIHLLHDDRGPVLESILSRTIRKMDQTHDE
VRVVGLSATLPNYKDVAAFLRVDVKKGLFYFDASYRPVGLKQQFIGVTEKKAIKRLQTIN
EVCYEKVLNQAGKTQTIVFVHSRKETAKTAAFLRDMAMEKDTLAQFINPEGASREVLIHE
AAQCKDTKLKDLLPFGFGIHHAGMSREDRMTVEELFLDGHIQVLCCTATLAWGVNLPAHT
VIIKGTQIYNPEKGKWCELSPQDVLQMLGRAGRPQFDTYGEGIIITNHGELQYYTSLMNQ
QLPIESQFVSRMVDNLNAEIVLGTVRNRDEGVQWLGYTYLYVRMLGSPALYNVGADYMDG
DSTLVQKRADLIHSAAVLLEKGGLVRYDRATGVFQSTDLGRIASHYYVAYSSMAVYNKHL
KPNLTMIDLFRVFALSNEFKLIPVRQEEKLELAKLIERVPIPVKEGVDEPVAKVNVLLQT
YISQLKLSGFDIVTDMVFIQQSAGRIIRAMFEICLKKGWAGPMRAALDLCKMVERRMWKS
MSPLRQFPRIRPEIINKAERKEFPWHRYFDLDAAELGELIGLPKSGQYIESLVHKFPRLD
LQAHVLPLTRSLLKINVTITPDFVWDRDIHGSTQAFWIVVEDVDGEHILFHDQFVLRERF
AQDEHYVTITVPISEPVPPNYYLSVISDRWLQSETKLPISFQHLIRPEPFPPHTPLLELQ
PLPITALHNKQFEELYPFENFNKIQTQVFQALFTTDDNVFVGAPTGSGKTICAEFALFRL
WSKRDPPRAVCIEPYQEMVDLRVAEWAEKFAPLEKEVVALTGESTADLGLLRKADIVVCT
PSQWDLLSRRWKTRKDVQNIGLLIADELQLIGGDVGSTYEVIVSRTRYVAQQTDTATRIV
ACSVSLSNARDLGDWIGASSQSIFNFSPSARPLPLEVHLQSFNVPHFPSLMLAMAKPAYL
AMVEHSAGRPTICFVASRKQCKSTANDILTYCLADEDEGRFLNVDKDELEPHLARLQDQD
LAETLRYGIGYYHEALSKIDKRIVTTLFQQGAIKVLVASKDTAWSLPVTSYMVIIMGVQS
FDGQEHRYVDYAIADVLQMMGRACRPSIDTSSRCVLMTQQTRKDFFKKFLNEALPVESSL
PNYMHDHFNAEIVAKTIENKQDAVDWCTWTWFYRRLMQNPGFYNLQGTTPTHVADYLSEL
VESTLNDLVASDCIIVQDEMDTLPNNLGMIASFYYISYVTVETFSASIKESTKLKGLLEI
VSSAHEFETIPIRHHEDTLLERIYDRVPVKVAKADYNSPYFKTYLLLQAHFSRMTLPPDL
AIDQATILGKVTSLLSACVDVMSSKSYLNCLGAMDLSQMCVQAVWDRDSPLKQVPYFDND
VLARFKTKGLDSVYDIMELEDDERNDLLRMDDKQLGRVAKFVNSYPNIEVSYSVEDSDSL
TSSDPVTINVTLDREADETDPNDQVADAPHFPHKKMVSWWLVVGDDKTRQLYAIKKVTVK
SKLETKLEFTLGEGQWGLKLYLICDSYTGADQDFDLEKLTVAQGESSDEEDSDEDMDED
NT seq
6480 nt
NT seq
+upstream
nt +downstream
nt
atgtccggtcagggacagaagaaggcgggagcgagggacctgtccgggttcaactatggt
gcgatgagtagcttggttgtcaatcaagatcgatcggttcttcgcacagatgagcccaca
ggtactgcggaatcccttgtgggtcgaatcaacctcaaggacatgggctcccgtgtcact
cgtgagacacccaaggatcttgaaaagaagaaggccaaagcgaaactcacgtctgcggac
gaggtggaaaggtctatccgtcgtgcacaagaacggtcaacagctcgattcggcgcggct
gatgttctggagagcgttgcccagttggagggattgaggtatcgaccgcgaacagcggag
accagagaggtgtatgaattgttactaggcttggtacatcagacgctgggtgatcagaca
caggaagttgtgcgaagtgcggcagacacggtcctagagtctctcaagagcgacgatctg
aaagagttcgacaagcggaaggaggtagagtcggtgcttggaccagtgaaggaagagaca
tggaatcaattggtcaatttagggaaaaaggtcaccgactacgaggaggaagacgaggcg
cttcaaggcgacgatcgacaacaagcggtggatcaggagggtgtggctgtcttattcgag
gacgaagatgaagatgatgacgaggggaacttcgaggtgaagcaaggagattcagaagac
gaagacgaggacgaagaggatgaggatgaggatgcggagggatctgatgaagaggacgag
gctatggacgaggatgatgcgcttgttcttggtaaagagaccactcgaacaaagtccaag
tccgataaagtgtcacctcacgaggtggacggtttctggcttcaacggttaatcgctgcg
tcctacaccgaccctgttcagtctgccgatttcaccgcaaaagcactcgacttcctcggc
tctgaagctgaacttcgtgatctggagaactcgttggctgaaatgttcggctacgaaaat
ttcgaactcgtcactacactcaccaagaaccgagacgtcatcgtttggtgcaccaagttg
gctagaagtagcgaagaggagaagcaagatgtcgaggtggcaatgcgtgagaagggtgtc
ggatggattttgagagagcttcgagggggcagggacaaggacacaagcggaaagcagccc
gagatgactgtttctaccaaggcgactcttgccccgggatctgttgctcaacctcggcgc
gtgatcgacatcgactccctcatcttcactgaaggtgggcatctcatgtcaaggaaaaag
gtcaagctgccagaaggttccttcaagcgacagatgaagggttacgaagagattcatgtt
ccagaaccgaagcgacgagaaatcgtaccaggagagctcgtttcaatatctcagatgcct
gattggacacatccagtatgggcgagcgtcaataccaccaagctcaacacgatccaaagc
aaggtcttccctatcgctttcgagaccaacgagccgatgttgatttgtgcgcccactggt
gccggaaagactaattgtgctgctcttgccattctccgttgcatctctcaattcctcgac
cctgagactggttacatcgaccgcgatgctttcaagatcatctacgtctcccccatgaag
gctttggtgcaagaacaggtggcagcgttcagcaaacgattctccgctctcgacatccgc
gttgcggaattaactggtgacagtcagctcaccaagcaacagatatcggaaacccagatc
attgttaccacccctgagaaatgggatgtaatcacacgaaaatctaccgataccagctac
accaatctggtacgacttgttattgttgacgagattcacttgcttcacgatgatcgagga
cctgtgctggagtctattctgtcccgtacgatccgaaaaatggatcagacacacgacgaa
gtccgagttgttggtctttctgctactttgcccaactacaaggatgtcgctgcattcctc
cgagtcgatgtcaagaagggtcttttctacttcgatgcatcctatcgaccggtcggtctc
aagcaacaatttatcggtgtcacagagaagaaggctatcaagcgattgcagactatcaac
gaagtctgttacgagaaagttctcaatcaggctggaaagacgcagaccattgtctttgtg
cattcaagaaaagaaacggccaaaacggcggcgttcttgcgcgacatggcgatggagaag
gacactttggcgcagttcatcaatcctgagggtgcatcccgagaggtcctgattcacgaa
gcggctcaatgcaaggacacaaaattgaaggatctccttcctttcggtttcggtatccat
catgccggtatgagccgagaggaccgaatgacagttgaggaactcttccttgacggtcat
attcaagtcctctgctgtactgctactctggcatggggtgtcaatcttcctgcgcacact
gtcatcatcaagggaacgcagatctacaatccggagaagggcaagtggtgcgagctctca
cctcaagatgtactacaaatgcttggacgagctggtcgacctcaattcgacacatacggt
gaaggtataattatcaccaaccacggagagttacaatactacaccagtttgatgaatcag
caattaccgattgagtcgcaattcgtttctagaatggttgataaccttaatgcggagatc
gtgcttggtacagtgaggaacagagacgagggtgtgcaatggctgggctacacatacctg
tatgtgcgtatgcttggctcacctgcactttacaatgtcggtgcggattatatggacggt
gattcaacattggtacagaagagagccgacctgattcattctgctgccgttcttcttgag
aaaggtggtcttgtccgttacgatcgagctacgggcgttttccagagcactgatctcggt
cgcatcgcttcgcactactacgtcgcgtacagctctatggcggtctacaataagcacctc
aagccaaatcttaccatgatcgacctcttcagagtgttcgctctttccaacgagttcaag
ctcatcccagtccgacaggaggagaagctcgagcttgccaaattgatcgaaagagtgcct
attcctgtcaaagaaggtgttgatgagcctgtcgccaaagtcaatgtcctgctccaaaca
tatatctcacaactgaagctcagcggtttcgatatcgttaccgacatggtgttcatccag
caatctgctggtcgtatcattcgcgccatgttcgagatctgcttgaagaagggctgggca
ggtcctatgcgggcagcgttagacttgtgtaagatggtagagagacgaatgtggaagtcg
atgtccccgctgcgacaatttccacgaatccgacccgagatcattaacaaggcagagagg
aaggagttcccctggcatcgatatttcgatctcgacgctgccgagttaggagagctcatc
ggtctacctaaatccggtcaatacatcgaaagcttggttcataaattcccacggctcgac
cttcaagctcacgtccttcccctgacgagatctttgctcaagatcaacgttacgatcact
cctgatttcgtgtgggatcgagatattcacggttctactcaggctttctggatcgttgtg
gaggatgtcgacggtgaacacatcctctttcacgatcagtttgttctacgagagcgattc
gcacaggacgaacactacgtcactatcacagtccccatctctgaacctgttccgccaaat
tattacctctcggtcatctctgacaggtggttgcaatcggaaaccaaattgcctatctca
ttccagcatctcatccgacccgagcctttccctccccacactcccctgctcgagcttcag
cctctccccatcactgccctgcacaacaagcagtttgaagaattgtacccatttgagaac
ttcaacaagatccaaacccaggtattccaagctcttttcaccaccgacgacaatgtcttt
gtcggtgcccccaccggtagcgggaagaccatctgtgccgaattcgccctttttaggttg
tggtcaaagcgtgatcctccacgagcggtctgcatcgagccttaccaggaaatggtcgac
ttgcgtgtggcagagtgggcggagaagtttgcacctcttgagaaggaggtggtcgctctt
accggcgaatcaacagcggatcttggtctgctgaggaaggcagatatcgtcgtctgcacg
cctagccagtgggatctgctttctcgccgatggaagacaagaaaggatgttcagaatatc
ggattgctcattgccgacgaactgcaactcattggtggtgacgtgggttccacttatgaa
gtgatcgtgtctcgtacaagatacgtcgcacaacagaccgacaccgccactcgaatcgtc
gcctgtagtgtgtccctctctaacgctcgagatctcggagactggatcggtgcctcctcg
cagtccatcttcaacttctcaccttccgctcgaccactacctctcgaagtccaccttcag
tctttcaatgtccctcacttcccctcactcatgttggcaatggctaaaccggcctacctc
gctatggttgagcattcagcaggaagacctaccatatgcttcgttgcttcaagaaaacaa
tgcaagtctaccgccaacgacattttgacctattgtttggcagatgaggatgaaggaaga
tttctgaacgttgacaaagacgaattggagccccatcttgcgagactacaggatcaggac
ttggcagagacgttacgatacggtatcgggtactaccacgaggcgttgagcaagattgac
aagagaatcgtgactacgctgttccaacagggagctatcaaggttctcgttgcctcaaag
gacactgcgtggagtcttcctgtgacctcatatatggtcatcatcatgggtgtgcagtct
ttcgacggtcaggagcaccgatatgttgactatgctatcgccgatgtcctccaaatgatg
ggccgggcttgtcgaccatcaatcgacacgtcatctcgatgtgttttgatgactcaacaa
acccgaaaagacttcttcaagaagttcttgaatgaggcgctacctgtggaatcgagcttg
ccgaactacatgcacgatcacttcaatgcggagatcgtggctaaaaccatcgagaacaag
caggatgcggtcgattggtgcacatggacgtggttctaccgacgactaatgcagaaccca
gggttttacaatcttcaagggacaacacctacccacgtcgccgattacctgtccgagcta
gtcgagtcaactttgaacgatctcgtcgcgtccgactgtattatcgttcaggatgagatg
gatacacttcccaacaatctcgggatgatcgcgtctttctactacatctcctatgtcacc
gtcgaaaccttctctgcctccatcaaggagtcaaccaagctgaagggtttgctcgagata
gtttcctccgcgcacgaattcgaaactatccctatccgacatcacgaggatacccttttg
gaacggatttacgatcgtgtacctgtcaaggttgcgaaggcagattacaactctccttac
ttcaagacatatcttttgttacaagctcacttcagccgcatgacattaccgccggatctc
gccatcgatcaggctacgatcctgggcaaggtcaccagtctcttatcagcttgcgtggat
gtcatgtccagtaaatcgtacctcaactgtctgggcgccatggatttgagtcagatgtgt
gtgcaggctgtttgggatagagacagccctctgaaacaggtcccatactttgacaacgat
gtgttggcgaggttcaagaccaagggtcttgattcggtctacgacatcatggagttggag
gatgatgagaggaacgatctgttgagaatggatgacaagcagctcggccgagtcgccaag
tttgtcaattcgtaccccaacatcgaagtctcctactctgtagaagattccgactctctc
acttcttcggacccggtaacgatcaatgtgacgcttgatcgagaagctgatgaaactgat
ccgaatgatcaagtcgccgatgcaccccacttcccgcacaaaaagatggtatcatggtgg
ttggttgtgggtgatgataagacccgacaactgtacgcgatcaagaaggtcacggtgaaa
tcaaagttggagaccaagttggagttcactttgggtgaaggtcaatggggtttgaagttg
tatttgatctgtgacagttatactggcgccgaccaagatttcgatcttgagaaacttaca
gtcgctcaaggtgagagttcggacgaggaagattcagatgaggacatggacgaagattga
DBGET
integrated database retrieval system
