Kwoniella newhampshirensis: 92183035
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Entry
92183035 CDS
T10314
Symbol
IAR55_005777
Name
(RefSeq) hypothetical protein
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
kne Kwoniella newhampshirensis
Pathway
kne03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
kne00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
92183035 (IAR55_005777)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
kne03041
]
92183035 (IAR55_005777)
Spliceosome [BR:
kne03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
92183035 (IAR55_005777)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40_Prp19
WD40
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
WD40_WDHD1_1st
WD40_Gbeta
Beta-prop_EML_2
EIF3I
Beta-prop_WDR36-Utp21_2nd
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
PRP4
WD40_MABP1-WDR62_2nd
WD40_MABP1-WDR62_1st
Beta-prop_DCAF4
WDR90_beta-prop_4th
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR75_1st
ANAPC4_WD40
Beta-prop_WDR41
NBCH_WD40
Beta-prop_Aladin
Beta-prop_SCAP
Beta-prop_DCAF12
Beta-prop_IFT122_1st
WD40_like
Beta-prop_HPS5
Beta-prop_EIPR1
Beta-prop_WDR19_1st
Beta-prop_IFT140_1st
WD_LRWD1
5HT_transport_N
Motif
Other DBs
NCBI-GeneID:
92183035
NCBI-ProteinID:
XP_066800640
UniProt:
A0AAW0YVE7
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Position
12:530867..533010
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AA seq
522 aa
AA seq
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MDFDDLAVDNTYQLGGSDDERERAQNAALIEELERKKRLRKMAVPTDDKKVRERLRAYGE
PITLFGEGPGDRRDRLKYVQEQIEQARGREGMDVDFSSDESSEEEDEGEFYTEGSDALLE
ARRKLAGYSLTKAQSRIARQRVEVALPLSKIVNMRKELYQNLKAFNNLGSQFGDDRPLST
IRFSPNSKLILTTSWTGDSKLWDLPNLNAVGTKRGHTDKIGGAAWHPQATVGMSEEGLNF
ATGGGEGSVKLWSLSSDKPLATLSGHENRVGRVAFHPSGAYLGSAGFDGTWRLWDAATHQ
ELMVQEGHSKEVYALTFQDDGALAASGGFDAIGRVWDLRTGRTAMVLDGHVKEILAMDFA
PNGYQVATGSGDDTVRIWDLRALKTQYIIPAHKSSVSDIRFFRSSSELPCIPLDGKPAPQ
SNGYSAVNGSGESMDIDASHDQDNQPDISSETGDLPRSGLFLVTAGFDCNVRIWSADEWN
LVRNLATDAGKVMSVDVSGDGKFIASASYSRSFHLFGGDNSS
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atggatttcgatgatcttgccgtcgataacacctaccaactcggtggttcggatgatgag
cgagaacgagctcagaatgccgctctcatcgaagagctggagaggaagaagaggttaagg
aagatggcggtcccgactgatgacaagaaggttagggagagactgagagcgtatggagag
ccgataacgctgttcggagaagggcccggagacagacgagatcgattaaaatatgttcaa
gaacagattgagcaagctcgtgggagagaaggtatggatgtggatttcagctcggacgag
agtagtgaagaggaagacgaaggagaattctacaccgagggatcagatgccttacttgag
gcaagacggaagttggcgggttactcgttgacgaaggcccagtcacggatagcgcgtcag
cgggtcgaagtagcattgccgctgagcaagattgtgaatatgcgaaaggagctataccaa
aatctcaaggcattcaacaatcttggttcacaattcggtgatgatagaccattgtctaca
atccgtttctctccaaattccaaactcattctcacaacatcctggactggtgactcgaag
ctgtgggatctgcccaatctcaatgcggtagggacgaagcgaggacatacggataagatc
ggtggtgcagcttggcatcctcaagcgacagtcggaatgagcgaggaaggcttgaacttt
gcgacgggaggcggagaaggaagtgtcaagctgtggtcgttgtctagcgacaagccatta
gccacgctatctggccacgagaacagggtgggacgggtcgcctttcacccttcaggcgca
tatcttggctcagcaggcttcgatgggacatggagattatgggatgcggcgacacatcag
gagctgatggtccaagagggacacagcaaggaggtgtatgcgttgacattccaggatgac
ggagctttggcggcttcgggtggatttgatgcgattggtcgagtgtgggatttgaggacg
gggagaacggctatggttttggacggacacgtcaaggagatcctcgcgatggactttgcg
ccaaatggctaccaagtcgctactggctcaggagacgacacggtgcgaatatgggatctt
cgagctctgaaaacacaatatatcatccctgcgcacaaatcttccgtgtcagacatccga
ttcttccgctcttcatcagaactcccatgtatacctctcgacggcaagcctgcccctcaa
tcgaatgggtactccgcagtcaacgggtctggcgaatcaatggatatcgacgcttcccac
gatcaagataatcagcctgatatcagctccgagacgggagatttgccgagatcaggactg
ttcctcgtcacagcgggattcgattgcaatgtcagaatatggagtgcggacgaatggaac
ctcgtacggaatctcgcgactgatgcgggtaaagtcatgtcggtggacgtttcgggcgac
ggaaaattcatcgcgagcgcaagttatagtagatcattccatctctttggaggtgataat
tcttcataa
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