KEGG   Kwoniella newhampshirensis: 92183035
Entry
92183035          CDS       T10314                                 
Symbol
IAR55_005777
Name
(RefSeq) hypothetical protein
  KO
K12662  U4/U6 small nuclear ribonucleoprotein PRP4
Organism
kne  Kwoniella newhampshirensis
Pathway
kne03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:kne00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    92183035 (IAR55_005777)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:kne03041]
    92183035 (IAR55_005777)
Spliceosome [BR:kne03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6 snRNP specific factors
    92183035 (IAR55_005777)
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40_Prp19 WD40 Beta-prop_WDR3_1st Beta-prop_THOC3 WD40_CDC20-Fz Beta-prop_WDR3_2nd WD40_WDHD1_1st WD40_Gbeta Beta-prop_EML_2 EIF3I Beta-prop_WDR36-Utp21_2nd WDR55 Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd Beta-prop_EML Beta-prop_WDR90_POC16_2nd PRP4 WD40_MABP1-WDR62_2nd WD40_MABP1-WDR62_1st Beta-prop_DCAF4 WDR90_beta-prop_4th Beta-prop_WDR36-Utp21_1st Beta-prop_WDR75_1st ANAPC4_WD40 Beta-prop_WDR41 NBCH_WD40 Beta-prop_Aladin Beta-prop_SCAP Beta-prop_DCAF12 Beta-prop_IFT122_1st WD40_like Beta-prop_HPS5 Beta-prop_EIPR1 Beta-prop_WDR19_1st Beta-prop_IFT140_1st WD_LRWD1 5HT_transport_N
Other DBs
NCBI-GeneID: 92183035
NCBI-ProteinID: XP_066800640
UniProt: A0AAW0YVE7
LinkDB
Position
12:530867..533010
AA seq 522 aa
MDFDDLAVDNTYQLGGSDDERERAQNAALIEELERKKRLRKMAVPTDDKKVRERLRAYGE
PITLFGEGPGDRRDRLKYVQEQIEQARGREGMDVDFSSDESSEEEDEGEFYTEGSDALLE
ARRKLAGYSLTKAQSRIARQRVEVALPLSKIVNMRKELYQNLKAFNNLGSQFGDDRPLST
IRFSPNSKLILTTSWTGDSKLWDLPNLNAVGTKRGHTDKIGGAAWHPQATVGMSEEGLNF
ATGGGEGSVKLWSLSSDKPLATLSGHENRVGRVAFHPSGAYLGSAGFDGTWRLWDAATHQ
ELMVQEGHSKEVYALTFQDDGALAASGGFDAIGRVWDLRTGRTAMVLDGHVKEILAMDFA
PNGYQVATGSGDDTVRIWDLRALKTQYIIPAHKSSVSDIRFFRSSSELPCIPLDGKPAPQ
SNGYSAVNGSGESMDIDASHDQDNQPDISSETGDLPRSGLFLVTAGFDCNVRIWSADEWN
LVRNLATDAGKVMSVDVSGDGKFIASASYSRSFHLFGGDNSS
NT seq 1569 nt   +upstreamnt  +downstreamnt
atggatttcgatgatcttgccgtcgataacacctaccaactcggtggttcggatgatgag
cgagaacgagctcagaatgccgctctcatcgaagagctggagaggaagaagaggttaagg
aagatggcggtcccgactgatgacaagaaggttagggagagactgagagcgtatggagag
ccgataacgctgttcggagaagggcccggagacagacgagatcgattaaaatatgttcaa
gaacagattgagcaagctcgtgggagagaaggtatggatgtggatttcagctcggacgag
agtagtgaagaggaagacgaaggagaattctacaccgagggatcagatgccttacttgag
gcaagacggaagttggcgggttactcgttgacgaaggcccagtcacggatagcgcgtcag
cgggtcgaagtagcattgccgctgagcaagattgtgaatatgcgaaaggagctataccaa
aatctcaaggcattcaacaatcttggttcacaattcggtgatgatagaccattgtctaca
atccgtttctctccaaattccaaactcattctcacaacatcctggactggtgactcgaag
ctgtgggatctgcccaatctcaatgcggtagggacgaagcgaggacatacggataagatc
ggtggtgcagcttggcatcctcaagcgacagtcggaatgagcgaggaaggcttgaacttt
gcgacgggaggcggagaaggaagtgtcaagctgtggtcgttgtctagcgacaagccatta
gccacgctatctggccacgagaacagggtgggacgggtcgcctttcacccttcaggcgca
tatcttggctcagcaggcttcgatgggacatggagattatgggatgcggcgacacatcag
gagctgatggtccaagagggacacagcaaggaggtgtatgcgttgacattccaggatgac
ggagctttggcggcttcgggtggatttgatgcgattggtcgagtgtgggatttgaggacg
gggagaacggctatggttttggacggacacgtcaaggagatcctcgcgatggactttgcg
ccaaatggctaccaagtcgctactggctcaggagacgacacggtgcgaatatgggatctt
cgagctctgaaaacacaatatatcatccctgcgcacaaatcttccgtgtcagacatccga
ttcttccgctcttcatcagaactcccatgtatacctctcgacggcaagcctgcccctcaa
tcgaatgggtactccgcagtcaacgggtctggcgaatcaatggatatcgacgcttcccac
gatcaagataatcagcctgatatcagctccgagacgggagatttgccgagatcaggactg
ttcctcgtcacagcgggattcgattgcaatgtcagaatatggagtgcggacgaatggaac
ctcgtacggaatctcgcgactgatgcgggtaaagtcatgtcggtggacgtttcgggcgac
ggaaaattcatcgcgagcgcaagttatagtagatcattccatctctttggaggtgataat
tcttcataa

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