KEGG   Kwoniella newhampshirensis: 92183716
Entry
92183716          CDS       T10314                                 
Symbol
IAR55_006458
Name
(RefSeq) hypothetical protein
  KO
K12626  U6 snRNA-associated Sm-like protein LSm7
Organism
kne  Kwoniella newhampshirensis
Pathway
kne03018  RNA degradation
kne03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:kne00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    92183716 (IAR55_006458)
  09123 Folding, sorting and degradation
   03018 RNA degradation
    92183716 (IAR55_006458)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:kne03019]
    92183716 (IAR55_006458)
   03041 Spliceosome [BR:kne03041]
    92183716 (IAR55_006458)
Messenger RNA biogenesis [BR:kne03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     92183716 (IAR55_006458)
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     92183716 (IAR55_006458)
Spliceosome [BR:kne03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    92183716 (IAR55_006458)
SSDB
Motif
Pfam: LSM DUF150_C Hfq DUF6897
Other DBs
NCBI-GeneID: 92183716
NCBI-ProteinID: XP_066799835
UniProt: A0AAW0YE49
LinkDB
Position
14:complement(273449..274296)
AA seq 106 aa
MSSRGGRGGSRGGAPQQGEKKKRESILNLAQYVDKSVKVKFMGGREVTGTLKGFDQLMNL
VMDDVVEEYENNTLPSRSLGLVVLRGPNIVLISPTDGSAEIENPFQ
NT seq 321 nt   +upstreamnt  +downstreamnt
atgtcaagtagaggcggccgaggaggctctcgaggcggtgctccccaacaaggcgagaag
aaaaagagagaatcgatcttgaacctcgctcaatatgtggacaagtcggtcaaggtcaaa
ttcatgggtggtagagaggtcaccggcacattgaagggtttcgatcaactcatgaacttg
gtcatggacgacgtcgtggaggagtacgagaacaacacccttccctcgcgctcattgggt
ctggtcgtgctgagaggtcccaatatcgttcttataagtcctacagacggatcagcagaa
atcgaaaaccctttccaatag

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