Kwoniella newhampshirensis: 92183716
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Entry
92183716 CDS
T10314
Symbol
IAR55_006458
Name
(RefSeq) hypothetical protein
KO
K12626
U6 snRNA-associated Sm-like protein LSm7
Organism
kne Kwoniella newhampshirensis
Pathway
kne03018
RNA degradation
kne03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
kne00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
92183716 (IAR55_006458)
09123 Folding, sorting and degradation
03018 RNA degradation
92183716 (IAR55_006458)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kne03019
]
92183716 (IAR55_006458)
03041 Spliceosome [BR:
kne03041
]
92183716 (IAR55_006458)
Messenger RNA biogenesis [BR:
kne03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
92183716 (IAR55_006458)
mRNA degradation factors
5'-3' decay
Lsm complex
92183716 (IAR55_006458)
Spliceosome [BR:
kne03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
92183716 (IAR55_006458)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
DUF150_C
Hfq
DUF6897
Motif
Other DBs
NCBI-GeneID:
92183716
NCBI-ProteinID:
XP_066799835
UniProt:
A0AAW0YE49
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Position
14:complement(273449..274296)
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AA seq
106 aa
AA seq
DB search
MSSRGGRGGSRGGAPQQGEKKKRESILNLAQYVDKSVKVKFMGGREVTGTLKGFDQLMNL
VMDDVVEEYENNTLPSRSLGLVVLRGPNIVLISPTDGSAEIENPFQ
NT seq
321 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagtagaggcggccgaggaggctctcgaggcggtgctccccaacaaggcgagaag
aaaaagagagaatcgatcttgaacctcgctcaatatgtggacaagtcggtcaaggtcaaa
ttcatgggtggtagagaggtcaccggcacattgaagggtttcgatcaactcatgaacttg
gtcatggacgacgtcgtggaggagtacgagaacaacacccttccctcgcgctcattgggt
ctggtcgtgctgagaggtcccaatatcgttcttataagtcctacagacggatcagcagaa
atcgaaaaccctttccaatag
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