KEGG   Huiozyma naganishii: KNAG_0A01250
Entry
KNAG_0A01250      CDS       T08174                                 
Symbol
KNAG0A01250
Name
(RefSeq) hypothetical protein
  KO
K15542  polyadenylation factor subunit 2
Organism
kng  Huiozyma naganishii
Pathway
kng03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:kng00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    KNAG_0A01250 (KNAG0A01250)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:kng03019]
    KNAG_0A01250 (KNAG0A01250)
Messenger RNA biogenesis [BR:kng03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     KNAG_0A01250 (KNAG0A01250)
SSDB
Motif
Pfam: Beta-prop_WDR3_1st Beta-prop_WDR5 Beta-prop_THOC3 WD40 WD40_Prp19 WD40_CDC20-Fz Beta-prop_WDR3_2nd WD40_WDHD1_1st WD40_Gbeta Beta-prop_EML_2 WDR55 EIF3I Beta-prop_CAF1B_HIR1 Beta-prop_IFT140_1st Beta-prop_Aladin Beta-prop_EML Beta-prop_WDR36-Utp21_1st Beta-prop_WDR36-Utp21_2nd Beta-prop_TEP1_2nd ANAPC4_WD40 Beta-prop_WDR19_1st WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_C Beta-prop_RIG_2nd WD40_RFWD3 WDR90_beta-prop_4th Beta-prop_EIPR1 Beta-prop_IFT122_1st Beta-prop_WDR75_1st Beta-prop_WDR41 WD40_MABP1-WDR62_1st Beta-prop_DCAF4 Beta-prop_WDR35_TULP_N Beta-prop_SCAP Beta-prop_Vps41 PEP5_VPS11_N NBCH_WD40 WDR54 Beta-prop_SPT8 VPS8_N WD_LRWD1 Beta-prop_NOL10_N
Other DBs
NCBI-GeneID: 34523449
NCBI-ProteinID: XP_022462060
UniProt: J7S1T7
LinkDB
Position
1:<23559..>24917
AA seq 452 aa
MESINGMNSAAQKKYVSHRRTVDITSSYNRLYYYRKHGLLVPPIQPEVSYTVNIMPPDVY
KGATRVVNMPTKFTHLSSNKVKHVIPTIRWTPEGRRLIVATYNGEFSLWNGTSFNFESLM
QAHDSSITTMQYSHMGDWLISGDADGGIKIWQPNFNMVKELDGAHTECIRDVAFSANDSK
FVSCSDDNILKIWNFTNGQQERVLTGHHWDVKSCDWHPTMGLIASASKDNLVKLWDPRTG
NCVSTILKFKHTVLKTRFQPGGGNLLLGISKDKSCRVFDIRQNMTELMVFRDDVDYMTLL
WHPINHSTFTVGNYDGSIKHFDVLQDITKPVHVIPFAHDKCVTSLSYNPAGNILASASKD
RTIRFWTRARPVDPNAYDDPTYNDHKINGWYLGINNNINAVREKTEFGAAPPLQDNETSA
FATSSTYQTNSISNPSGPPVSAGRKSTLPGLG
NT seq 1359 nt   +upstreamnt  +downstreamnt
atggaatctatcaatggtatgaattcagctgcgcagaagaaatacgtatcacatcggagg
actgtggacataacgtcgtcatataacagactgtactactatagaaaacatgggctgctt
gttccaccaatacagccggaagtatcctacaccgtcaatatcatgccgccagacgtctat
aaaggtgctacgcgtgtggttaacatgcctacgaaattcacgcatttgagttcgaataaa
gtaaagcacgtaatccctacaattcgttggacaccggaggggaggagattgatagtggct
acgtataatggtgagttctcactttggaacggtacttccttcaactttgagagtttgatg
caagcacatgactcgtcgatcaccacaatgcaatactcgcatatgggcgactggcttatc
agtggtgatgctgacggtggaatcaagatatggcagccgaatttcaacatggtcaaggaa
ttggatggagcacacactgagtgcatcagagatgttgcattctcagcaaacgattcaaag
tttgtgagctgttcggatgataatatcttaaagatttggaatttcacgaacggtcagcag
gaacgtgttttgactgggcatcattgggacgtcaagagctgtgactggcatccaacgatg
ggacttattgcttctgcatccaaagataatttagtgaagctatgggatccaaggacaggg
aactgtgtttcgactatcctgaagttcaaacacacagtactgaaaacgagatttcagcca
ggtggagggaacctgctactgggtatatctaaggataagtcatgtcgtgtttttgatatc
agacaaaatatgacagagctcatggttttcagggacgatgtggattatatgactcttttg
tggcatcctattaaccattcaacatttactgtaggaaactatgatggttcgattaagcat
ttcgatgtattgcaagatataacgaaaccagttcacgtaataccgtttgcgcacgacaag
tgtgtgacttcgttatcatacaatcctgctggtaatattttggcaagtgccagtaaggat
aggacaatcaggttctggacgagggcaaggcccgtagatcctaatgcatacgatgatcca
acatacaacgatcataaaatcaacgggtggtaccttggtataaataacaatatcaacgca
gtgagggagaaaacggagtttggtgctgctccgcctcttcaagataacgaaacatcagca
ttcgccacttcatctacttatcagaccaactccatttcaaatccatctgggccacccgtt
tctgcagggaggaaatcgacactgcccggtttgggttga

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