Huiozyma naganishii: KNAG_0A04130
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Entry
KNAG_0A04130 CDS
T08174
Symbol
KNAG0A04130
Name
(RefSeq) hypothetical protein
KO
K12858
ATP-dependent RNA helicase DDX23/PRP28 [EC:
5.6.2.7
]
Organism
kng
Huiozyma naganishii
Pathway
kng03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
kng00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
KNAG_0A04130 (KNAG0A04130)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
kng03041
]
KNAG_0A04130 (KNAG0A04130)
Enzymes [BR:
kng01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
KNAG_0A04130 (KNAG0A04130)
Spliceosome [BR:
kng03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
KNAG_0A04130 (KNAG0A04130)
Complex C
U5 SnRNP specific factors
KNAG_0A04130 (KNAG0A04130)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
DDX23
Cas3-like_C_2
CMS1
P-loop_SecA
Motif
Other DBs
NCBI-GeneID:
34523727
NCBI-ProteinID:
XP_022462338
UniProt:
J7RTM2
LinkDB
All DBs
Position
1:<559075..>560904
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AA seq
609 aa
AA seq
DB search
MTRPVNIDVLLGKLGGRPSGKQAGKVEKPRLLSRLGRGEKQDVAVAHYSQNTQEGQDRDD
DYIHNIPMKSRSYGASSTGSVVVRETEVPINTSSGRKTGGRDKGKGKFNFDWKQEDDTLL
EQEPIVSKSSLQLVKNLYSKTQEHDRSHLMDNYMGEHWTVKPLDAMTAKDWRHMKEKYHI
MTKNSQGSVQNPLRTWQELGLIPPKLLNVLTRDLQFVEPSPIQRIAIPNIVHQPYKDLIG
VSSTGSGKTVAFAVPILIKMNGLIRPRSLKLMEGPKALILAPTRELVQQIESQIKNVTTR
DWTDDPNECTVVSIVGGHSLEELTNSLRNGCDILVATPGRLIDCLENHILTISNIDTLVL
DEADKMIDLGFEDQLKLTLSKVNVETKHRAGFQTLMFTATLSPAIELISHSYLQSPIHIL
VDSGEGSQPQVKQIVRYSPNTDQRFVELKAKVLPQFKAPIIIFINYKNTADWLAQKFQQE
TAYKVTILHGSKSQEQREHSLQLLRTGKAQIMIATNIAARGLDIPNVSLVINFQMSKNFD
DYVHRIGRTGRAGNSGTAITFVGDEEDQQVMKGLYQYVKDNNPTGANEFSTAVEQVYTLN
DKTNNLILF
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgacgaggcccgttaatatagatgtgctgttggggaagttaggcggacgccccagtggg
aagcaggccgggaaggtagagaaaccgagacttctgtcgagactcggcagaggcgagaag
caggatgtagcggtggcacattactctcagaacacccaggaggggcaagacagggatgat
gattacatacacaatatcccgatgaaatcccgtagctacggtgcatcgtcaacgggcagt
gttgttgttcgagaaaccgaggttccaataaatacttcttctgggcgcaagacaggcggt
agagacaagggcaaaggtaaattcaactttgattggaaacaggaagatgatacactactg
gagcaggaacccatcgtgtctaaatcgtctctccaattggtaaaaaatctgtattcgaag
acacaagagcatgacaggtcgcaccttatggataactatatgggtgaacattggaccgtt
aagccgctggatgcaatgacagcgaaggattggagacatatgaaggagaagtaccatatt
atgacaaagaactctcagggatccgtgcagaacccgttgcggacctggcaagagctgggt
ttaatcccgccaaaacttcttaacgtacttacacgggacttgcaatttgtggagcctagc
ccgatccaaaggattgccatcccgaatattgtccaccaaccgtacaaggatcttattggt
gtatcctctacaggttctggtaaaactgttgcatttgcagtcccgatcctgattaaaatg
aacggtttaatacgaccacgctcgctgaaacttatggagggtcccaaggcgcttatactt
gcacctacgagagagttggtccaacagattgaatcgcagataaaaaatgtcaccacgaga
gactggacggatgatccaaacgagtgtacggtggtatccatcgttggtggacactcgctg
gaagagctgacaaacagtttgcggaacgggtgtgacatacttgtcgctaccccagggagg
ttgatagactgtctggagaatcacatcctaacaatatcgaatattgacactctagtcttg
gatgaggcggacaagatgattgatttggggtttgaggaccagctaaagttgacccttagc
aaagtcaacgtggagacaaaacacagagcgggatttcagacattgatgtttacagccacc
ctttcgcccgccatcgagcttatttcgcatagttacctgcagtccccaatacacatattg
gtcgattctggcgaggggtcgcaaccgcaagtgaagcaaatcgttcgttactctccaaac
accgatcaaagatttgtggagctcaaagcgaaagtactcccgcaatttaaggcaccgatt
attatttttatcaattacaagaacacagccgactggttggctcaaaagtttcaacaggaa
actgcttacaaagtgacaattctgcatggttcaaaaagtcaagagcagagagagcattct
ttgcaacttctcagaactgggaaagcacaaatcatgattgcaacaaacattgctgctaga
gggttggatatccccaacgtatctcttgtcataaatttccaaatgtctaagaacttcgat
gactatgttcatcgaatcggtagaactggtcgtgcaggtaactctgggacagcaatcacc
tttgttggtgacgaggaggatcagcaggtaatgaaaggactgtatcaatacgttaaggat
aacaacccgaccggcgcaaacgagttttctacagcggtggaacaagtttatacactgaac
gataagacgaacaacctcattttgttttaa
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