KEGG   Huiozyma naganishii: KNAG_0A05850
Entry
KNAG_0A05850      CDS       T08174                                 
Symbol
KNAG0A05850
Name
(RefSeq) hypothetical protein
  KO
K12812  ATP-dependent RNA helicase UAP56/SUB2 [EC:5.6.2.7]
Organism
kng  Huiozyma naganishii
Pathway
kng03013  Nucleocytoplasmic transport
kng03015  mRNA surveillance pathway
kng03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:kng00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    KNAG_0A05850 (KNAG0A05850)
  09122 Translation
   03013 Nucleocytoplasmic transport
    KNAG_0A05850 (KNAG0A05850)
   03015 mRNA surveillance pathway
    KNAG_0A05850 (KNAG0A05850)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:kng03019]
    KNAG_0A05850 (KNAG0A05850)
   03041 Spliceosome [BR:kng03041]
    KNAG_0A05850 (KNAG0A05850)
Enzymes [BR:kng01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     KNAG_0A05850 (KNAG0A05850)
Messenger RNA biogenesis [BR:kng03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     KNAG_0A05850 (KNAG0A05850)
Spliceosome [BR:kng03041]
 Complex C
  Other components
   EJC/TREX
    KNAG_0A05850 (KNAG0A05850)
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    KNAG_0A05850 (KNAG0A05850)
SSDB
Motif
Pfam: DEAD Helicase_C ResIII Cas3-like_C_2 P-loop_SecA
Other DBs
NCBI-GeneID: 34523883
NCBI-ProteinID: XP_022462494
UniProt: J7RFB2
LinkDB
Position
1:873957..875306
AA seq 449 aa
MSHEGEEDLLEYSDNEQEIQVDANKAAETTATTTATGGEGEEANGEAAGTTDGDKKGSYV
GIHSTGFKDFLLKPELSRAIIDCGFEHPSEVQQHTIPQSIHGTDVLCQAKSGLGKTAVFV
LSTLQQLDPIPGEVSVVVICNARELAYQIRNEYLRFSKYMPDVKTAVFYGGTPINKDAEL
LKNKETSPHIVVATPGRLKALVRDKMIDLSHVKNFVIDECDKVLEELDMRRDVQDIFRAT
PRDKQVMMFSATLSQEIRPICRRFLQNPLEIFVDDEAKLTLHGLQQYYTKLEEREKNRKL
AQLLDDLEFNQVIIFVKSTNRANELTKLLNESNFPAITVHGHMKQEERIARYKAFKDFEK
RICVSTDVFGRGIDIERINLAINYDLPSEADQYLHRVGRAGRFGTKGLAISFISSKEDEE
VLAKIQERFDVKITEFPEEGIDPSTYLNN
NT seq 1350 nt   +upstreamnt  +downstreamnt
atgtcccacgaaggtgaagaagatttgttagagtactctgacaacgagcaagagatccag
gtcgatgccaacaaagccgccgagactaccgctactactacagctacaggcggtgagggt
gaggaggccaatggcgaggctgctggtaccactgacggtgacaagaaaggttcctacgtc
ggtattcactctactggtttcaaggattttttgttgaaacctgaattatccagggccatc
attgactgtggtttcgagcatccatctgaagtccaacagcatactattcctcaatccatt
cacggtaccgatgtcttgtgtcaagccaaatctggtttgggtaaaactgccgtttttgtg
ctgtccactttgcagcaactagatcctatcccaggtgaagtatctgttgtcgtcatttgt
aacgctagagaactggcttaccaaatccgtaacgagtacctaagattctcgaaatatatg
ccagacgtgaagactgcagtcttctacggtggtactccaattaacaaggatgccgaatta
ctcaagaacaaggaaacctctcctcacattgttgttgccactccaggtcgtttgaaggct
ttagttagagataagatgattgacctgtcccatgtcaagaactttgttattgatgagtgt
gacaaggtgctagaagagttggacatgagaagagatgtccaagacattttcagggctaca
ccaagagataaacaggtaatgatgttttctgccactttgtctcaagagattagaccaatc
tgcaggcgtttcttgcagaaccctctagagattttcgtcgatgacgaggctaagttgaca
ttgcacgggttgcagcaatactataccaaattggaggaacgcgaaaagaaccggaagcta
gctcaattgttagatgacttggagttcaaccaggttatcatcttcgtcaaatctacgaac
agggctaacgaactaaccaagcttctaaacgagtccaacttccctgccatcactgtccac
ggtcatatgaagcaggaagagcgtattgctaggtacaaagcattcaaagacttcgaaaag
agaatctgtgtatccactgatgttttcggtagaggtatcgatattgaacgtatcaacctt
gccatcaattatgatcttccaagcgaagctgatcagtacttgcatcgtgtcggtagagca
ggtagattcggtaccaagggtctagccatttctttcatttcctctaaggaagatgaggaa
gtgttggccaagattcaagaacgttttgatgttaaaattacggaattcccagaagaaggt
attgacccatccacttacttaaataattag

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