Huiozyma naganishii: KNAG_0A05850
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Entry
KNAG_0A05850 CDS
T08174
Symbol
KNAG0A05850
Name
(RefSeq) hypothetical protein
KO
K12812
ATP-dependent RNA helicase UAP56/SUB2 [EC:
5.6.2.7
]
Organism
kng
Huiozyma naganishii
Pathway
kng03013
Nucleocytoplasmic transport
kng03015
mRNA surveillance pathway
kng03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
kng00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
KNAG_0A05850 (KNAG0A05850)
09122 Translation
03013 Nucleocytoplasmic transport
KNAG_0A05850 (KNAG0A05850)
03015 mRNA surveillance pathway
KNAG_0A05850 (KNAG0A05850)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kng03019
]
KNAG_0A05850 (KNAG0A05850)
03041 Spliceosome [BR:
kng03041
]
KNAG_0A05850 (KNAG0A05850)
Enzymes [BR:
kng01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
KNAG_0A05850 (KNAG0A05850)
Messenger RNA biogenesis [BR:
kng03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
KNAG_0A05850 (KNAG0A05850)
Spliceosome [BR:
kng03041
]
Complex C
Other components
EJC/TREX
KNAG_0A05850 (KNAG0A05850)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
KNAG_0A05850 (KNAG0A05850)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
P-loop_SecA
Motif
Other DBs
NCBI-GeneID:
34523883
NCBI-ProteinID:
XP_022462494
UniProt:
J7RFB2
LinkDB
All DBs
Position
1:873957..875306
Genome browser
AA seq
449 aa
AA seq
DB search
MSHEGEEDLLEYSDNEQEIQVDANKAAETTATTTATGGEGEEANGEAAGTTDGDKKGSYV
GIHSTGFKDFLLKPELSRAIIDCGFEHPSEVQQHTIPQSIHGTDVLCQAKSGLGKTAVFV
LSTLQQLDPIPGEVSVVVICNARELAYQIRNEYLRFSKYMPDVKTAVFYGGTPINKDAEL
LKNKETSPHIVVATPGRLKALVRDKMIDLSHVKNFVIDECDKVLEELDMRRDVQDIFRAT
PRDKQVMMFSATLSQEIRPICRRFLQNPLEIFVDDEAKLTLHGLQQYYTKLEEREKNRKL
AQLLDDLEFNQVIIFVKSTNRANELTKLLNESNFPAITVHGHMKQEERIARYKAFKDFEK
RICVSTDVFGRGIDIERINLAINYDLPSEADQYLHRVGRAGRFGTKGLAISFISSKEDEE
VLAKIQERFDVKITEFPEEGIDPSTYLNN
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgtcccacgaaggtgaagaagatttgttagagtactctgacaacgagcaagagatccag
gtcgatgccaacaaagccgccgagactaccgctactactacagctacaggcggtgagggt
gaggaggccaatggcgaggctgctggtaccactgacggtgacaagaaaggttcctacgtc
ggtattcactctactggtttcaaggattttttgttgaaacctgaattatccagggccatc
attgactgtggtttcgagcatccatctgaagtccaacagcatactattcctcaatccatt
cacggtaccgatgtcttgtgtcaagccaaatctggtttgggtaaaactgccgtttttgtg
ctgtccactttgcagcaactagatcctatcccaggtgaagtatctgttgtcgtcatttgt
aacgctagagaactggcttaccaaatccgtaacgagtacctaagattctcgaaatatatg
ccagacgtgaagactgcagtcttctacggtggtactccaattaacaaggatgccgaatta
ctcaagaacaaggaaacctctcctcacattgttgttgccactccaggtcgtttgaaggct
ttagttagagataagatgattgacctgtcccatgtcaagaactttgttattgatgagtgt
gacaaggtgctagaagagttggacatgagaagagatgtccaagacattttcagggctaca
ccaagagataaacaggtaatgatgttttctgccactttgtctcaagagattagaccaatc
tgcaggcgtttcttgcagaaccctctagagattttcgtcgatgacgaggctaagttgaca
ttgcacgggttgcagcaatactataccaaattggaggaacgcgaaaagaaccggaagcta
gctcaattgttagatgacttggagttcaaccaggttatcatcttcgtcaaatctacgaac
agggctaacgaactaaccaagcttctaaacgagtccaacttccctgccatcactgtccac
ggtcatatgaagcaggaagagcgtattgctaggtacaaagcattcaaagacttcgaaaag
agaatctgtgtatccactgatgttttcggtagaggtatcgatattgaacgtatcaacctt
gccatcaattatgatcttccaagcgaagctgatcagtacttgcatcgtgtcggtagagca
ggtagattcggtaccaagggtctagccatttctttcatttcctctaaggaagatgaggaa
gtgttggccaagattcaagaacgttttgatgttaaaattacggaattcccagaagaaggt
attgacccatccacttacttaaataattag
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