KEGG   Huiozyma naganishii: KNAG_0B00550
Entry
KNAG_0B00550      CDS       T08174                                 
Symbol
KNAG0B00550
Name
(RefSeq) hypothetical protein
  KO
K12601  superkiller protein 8
Organism
kng  Huiozyma naganishii
Pathway
kng03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:kng00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    KNAG_0B00550 (KNAG0B00550)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:kng03019]
    KNAG_0B00550 (KNAG0B00550)
Messenger RNA biogenesis [BR:kng03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Ski complex
     KNAG_0B00550 (KNAG0B00550)
SSDB
Motif
Pfam: WD40 Beta-prop_EML_2 WD40_WDHD1_1st WD40_CDC20-Fz WD40_Prp19 ANAPC4_WD40 Beta-prop_EML Beta-prop_RIG_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd PEP5_VPS11_N Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_1st Beta-prop_Nup120_160 EIF3I Beta-prop_WDR75_1st Beta-prop_TEP1_C Beta-prop_HPS5
Other DBs
NCBI-GeneID: 34524153
NCBI-ProteinID: XP_022462749
UniProt: J7RG48
LinkDB
Position
2:complement(90327..91658)
AA seq 443 aa
MRYHVVSCWKVPILLKDSKYSIVYHQDEQLAVRSSAHWYPSQLEHIQEMSKLFIPTANVG
KAHDADIYAVCVTNPYTITCSGDGYIKLWSNKLSEDDALAKLTPVATQHVHVSGLHHVDA
FYSAESFGTVLIVAAVSFSGDIFFYRIVNDAFQPFTGLLTAQENKKSYWAVKWVKSDDLA
VLHRLAAVDVKGTTYVWRLTVSEDATFNLESQGQIPCVGTPTLGTCVAVSSAMGLLATGF
ANGTVVVFQLSTLRPIYTFESFGMHGTEQNSNSVRCLEFSPKGTLLAVGNDLGSFGCVTL
YETEFGERIGNLSVPTSTNLAARQNTSGSSVGTFAHNGWVFGLCFNSSGEYLVTCGYDSK
LRVWDVKERDRVCTLNITAGDIEQEDEILLEDENGDSLKYPPIFDVQYFGKGVRSGMGNE
TNEGICCVCMDRSIRWYREAGGN
NT seq 1332 nt   +upstreamnt  +downstreamnt
atgcggtaccatgtcgtgtcttgttggaaggtgccaattttgttaaaagattcaaagtat
tcaatagtatatcaccaagatgaacagcttgcagtaaggagctcagcacattggtatccc
tcgcaattagaacatatccaggaaatgtcgaaactgtttatacccacggccaatgtcggt
aaggcgcacgatgcggacatttacgccgtctgcgtgacaaatccgtacactataacgtgc
agcggggacggatacattaaattgtggtctaacaagctgagtgaggatgacgctctggcg
aagctgacaccagtagcgactcagcatgtgcatgtatccgggctgcaccatgtggacgcg
ttttactcagcggagagtttcgggaccgtgctgatcgtcgctgctgtgtccttctccggt
gacatattcttctacaggatcgttaacgacgcattccagcctttcacagggctgctaacc
gctcaagagaataagaagtcgtattgggctgtcaagtgggtcaaatctgatgatctggcc
gtcttacacagactcgccgcggtagacgtcaaggggaccacatacgtctggcggctcacg
gtctcagaggacgcaacgttcaacttggaatcccagggccagataccatgcgtgggtacc
ccaacccttggcacctgtgtcgccgtctcgtccgctatggggcttctggccaccgggttt
gccaacgggactgttgtagtcttccaattgagcacattgaggccgatatacacattcgag
agtttcgggatgcacggcacggagcagaacagcaattctgtgcgttgtttggagttttcg
ccaaaggggacactcctcgcggtcggaaacgatcttgggtcctttggatgcgttactctt
tacgaaaccgagttcggcgaacgcatcggtaacttgagtgtcccgacgagcacgaacctg
gccgcgaggcagaataccagcggtagcagcgtgggcacatttgcgcataacgggtgggtt
tttggcctgtgcttcaattcttctggggagtacttggtcacctgcgggtacgacagtaaa
ctacgtgtgtgggacgtcaaagaacgtgacagagtctgtactttgaacataacagcgggt
gatatagagcaagaagacgagatcctcttggaggacgaaaacggtgactcgttgaagtac
ccgcccatcttcgacgtccaatacttcggaaagggcgtccgttctgggatgggcaacgaa
acaaacgaggggatctgttgtgtctgtatggacaggagtataagatggtatagagaggcc
ggaggcaactga

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