Huiozyma naganishii: KNAG_0B03910
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Entry
KNAG_0B03910 CDS
T08174
Symbol
KNAG0B03910
Name
(RefSeq) hypothetical protein
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
kng
Huiozyma naganishii
Pathway
kng03020
RNA polymerase
kng03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
kng00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
KNAG_0B03910 (KNAG0B03910)
09124 Replication and repair
03420 Nucleotide excision repair
KNAG_0B03910 (KNAG0B03910)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
kng03021
]
KNAG_0B03910 (KNAG0B03910)
03400 DNA repair and recombination proteins [BR:
kng03400
]
KNAG_0B03910 (KNAG0B03910)
Enzymes [BR:
kng01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
KNAG_0B03910 (KNAG0B03910)
Transcription machinery [BR:
kng03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
KNAG_0B03910 (KNAG0B03910)
DNA repair and recombination proteins [BR:
kng03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
KNAG_0B03910 (KNAG0B03910)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
MRNIP
Motif
Other DBs
NCBI-GeneID:
34524482
NCBI-ProteinID:
XP_022463078
UniProt:
J7RV95
LinkDB
All DBs
Position
2:751219..754881
Genome browser
AA seq
1220 aa
AA seq
DB search
MSNEEYYDEDPYGFEDESAPITAEDSWTVISSFFREKGLVSQQLDSFNQFVDYTLQDIIS
EDSRLILEQLAQHTTEADNISRKYEISFGKIYVTKPMVNESDGVTHALYPQESRLRNLTY
SSGLFVDVKKRTYEAIDVPGRDLKYELIAEESEDDSERGKVFIGRLPIMLRSKNCYLSDA
TESDLYKLKECPFDMGGYFIINGSEKVLIAQERSAGNIVQVFKKAAPSPISHVAEIRSAL
EKGSRFISTLQVKLYGREGSSSRTIKATLPYIKQDIPIVIIFRALGVIPDGEILEHICYD
VNDWQMLEMLKPCVEDGFVIQDRETALDFIGRRGTALGIKKEKRIQYAKDILQKEFLPHI
TQLEGFESRKAFFLGYMINRLLLCALDRKDQDDRDHFGKKRLDLAGPLLGQLFKTLFRKL
TKDIFRYMQRTVEEAHDFNMKLAINAKTITSGLKYALATGNWGEQKKAMSSRAGVSQVLN
RYTYSSTLSHLRRTNTPIGRDGKLAKPRQLHNTHWGLVCPAETPEGQACGLVKNLSLMSS
ISVGTDPMPIITFLSEWGLEPLEDYVPHQSPDATRVFVNGVWHGVHRNPARLMETLRTLR
RKGDINPEVSMIRDIREKELKIFTDAGRVYRPLFIVEDDEALGHKELKVRKGHIAKLMAT
EYQDIEGGLDEADEYTWTSLLNEGLVEYIDAEEEETILIAMQPEDLEPVIEEENPIDDMD
PAKRIKASQNATTFTHCEIHPSMILGVAASIIPFPDHNQSPRNTYQSAMGKQAMGVFLTN
YNVRMDTMANILYYPQKPLGTTRAMEYLKFRELPAGQNAIVAIACYSGYNQEDSMIMNQS
SIDRGLFRSLFFRSYMDQEKKYGMSITETFEKPQRTNTLRMKHGTYDKLDDDGLIAPGVR
VSGEDIIIGKTTPISPDEEELGQRTAYHSKRDASTPLRSTENGIIDQVLVTTNQDGLKFV
KVRVRTTKVPQIGDKFASRHGQKGTIGITYSREDMPFTAEGIVPDLIINPHAIPSRMTVA
HLIECLLSKVAALSGNEGDASPFTDITVEGISKLLREHGYHSRGFEVMYNGHTGKKLMAQ
IFFGPTYYQRLRHMVDDKIHARARGPMQVLTRQPVEGRSRDGGLRFGEMERDCMIAHGAA
AFLKERLMEASDSFRVHICGNCGLMSVIAKLSHNQFECKGCNNKIDIYQIRIPYAAKLLF
QELMAMNITPRLYTDRSRDF
NT seq
3663 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaacgaagaatattacgacgaggatccatatggattcgaggatgagagcgcgccc
attaccgcagaggattcatggaccgtcatttcctcctttttcagggaaaaggggttggtg
tcgcaacagttggactcctttaatcagtttgtcgactacactttgcaggacatcatttca
gaagactcgagactgattttggagcagctggcacaacacaccacggaggcggataatatc
agtagaaaatacgagattagttttggtaaaatctatgttaccaaacccatggtgaacgaa
tcggacggtgtgacgcatgcgttgtatcctcaggagtcccgtttgcgtaacttgacttac
tcttccgggctgttcgttgatgtgaagaagaggacatatgaggctatcgatgttcctggt
agagacttgaagtatgaattgattgcagaagaatcagaggacgacagcgagcgcgggaaa
gtattcatcggtcgtctgccgatcatgctgaggtcgaagaattgttatctaagtgatgcc
accgaatcagacttgtataaactgaaggaatgtccttttgatatgggtggttactttatc
attaacggttctgagaaggtgttgattgcccaagaacgttcggcaggtaacattgtgcaa
gtgttcaaaaaggcagctccatctccaatttcgcacgtggcggagattagatccgcgctg
gagaagggttccaggtttatcagtacactgcaggtcaagctttacggtcgtgaaggtagt
tcttctcgtaccatcaaggcaaccctaccttacatcaagcaagatattcccatcgttatt
atatttagagcgctcggtgtcattccagatggtgagattcttgagcacatctgttacgac
gtcaacgattggcaaatgctggaaatgttgaagccttgtgtggaggatggttttgttatt
caagatcgtgagacagcattagatttcattggtcgtcgtggtacagcactgggtattaag
aaggagaagagaattcaatatgctaaggatatcctacagaaagaattcctacctcacatc
acgcaattggaaggtttcgaaagtaggaaagcgtttttcttagggtatatgatcaacagg
ttgctgttgtgtgcccttgatcgtaaagaccaagatgatcgtgatcatttcggtaaaaag
agactagatttggctggtcctttactgggacagctgttcaaaacgctattcagaaaatta
acgaaggatatcttcagatacatgcagagaactgtcgaagaggctcatgacttcaatatg
aaactggcaatcaatgctaaaactatcacctcagggctgaaatacgcattagcgactggt
aactggggtgaacagaaaaaggctatgtcttcgagggccggtgtttctcaagttttgaat
cgttacacctactcctcgacattgtcacatttgagaagaacaaacacacccattggtcgt
gatggtaagctggctaaacctcgtcagttacacaacacccattgggggctggtctgtccg
gctgaaactcctgaagggcaagcttgtggtttggtcaagaacctatccttgatgtcgtcg
atatcggttggtacggatccaatgccgatcatcacatttttgagtgaatggggtttggaa
cctttggaagactatgttccacaccaatctccggatgctactagagtatttgtcaacggt
gtctggcacggtgtccacagaaacccagctaggttaatggaaacgttgagaactcttaga
agaaagggtgatatcaaccctgaagtttctatgatcagagatattcgtgaaaaggagttg
aagatattcaccgatgctggtagagtttacagaccacttttcattgtcgaagatgatgaa
gctttaggtcacaaggaactgaaggttagaaagggccatattgcaaagctgatggctacg
gagtaccaggatattgaaggtgggctagacgaagcggacgaatacacttggacgtcatta
ctaaacgaaggtttagtcgagtacatagatgccgaagaagaagagactattttgattgcg
atgcaaccagaagatctcgaaccggttattgaagaggaaaaccctatcgacgatatggat
ccagcaaaacgtataaaggcgtctcaaaatgcaacaacctttacccattgtgaaattcat
ccatcgatgattctaggtgttgctgcgtctatcattcccttccctgatcataaccaatct
cctcgtaacacttaccaatccgccatgggtaaacaagcaatgggtgtattcctgaccaat
tacaacgtccgtatggacacgatggccaacatcttgtactacccccagaagccactgggt
accacacgtgctatggaatacttgaagttcagagagcttcctgctggtcaaaatgccatt
gtggcgattgcctgttactccggttacaatcaagaagattccatgatcatgaaccagtcc
tccattgacagaggtctcttcagatctttattcttcagatcctacatggatcaagagaag
aaatatggtatgtctataacagaaacgttcgagaagcctcaacgtacaaataccctgagg
atgaaacacggtacctacgacaaactggatgatgatggtttgattgcgcccggtgttaga
gtttctggtgaagatatcattattgggaaaaccaccccaatttccccagatgaggaggag
ttggggcagaggacagcataccactcgaaacgtgacgcatccaccccattgcggagtacg
gagaatggtattattgatcaagttttggttactactaatcaagatggtctgaaatttgtg
aaagtccgtgttagaaccaccaaggttccacaaatcggtgacaaatttgcctcgcgtcac
ggtcaaaagggtacaatcggtatcacatacagtagggaggacatgcccttcaccgcggaa
ggtatcgttccagatttaattatcaatcctcacgccattccatcgcgtatgacagttgcc
catttaatcgaatgtttgttgagtaaagttgcagccttgtcaggtaacgagggtgatgct
tctccattcacagatattaccgtagagggtatatctaagctgttacgtgaacacgggtac
cattcgcgtgggttcgaagttatgtacaacggtcacaccggtaaaaaactgatggcacaa
attttctttggtccaacctactaccagcgtttgagacatatggtcgatgataagattcac
gcgagagcgcgtggtccaatgcaagtactaacgaggcaacctgtggaaggtaggtctaga
gatggtggtctgagatttggtgaaatggaacgtgattgtatgattgcacatggtgctgcc
gcatttttgaaggaaagattaatggaggcctcggactcgttcagagtgcatatctgtggg
aactgtggtttgatgtcagttattgccaagctgagccataaccaattcgaatgtaaaggc
tgtaacaacaaaattgacatataccagattcgtatcccatacgctgcgaaactgctattc
caagaattaatggcaatgaacatcactccacgtttatacactgaccgttcgagagatttc
taa
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integrated database retrieval system