KEGG   Huiozyma naganishii: KNAG_0B03910
Entry
KNAG_0B03910      CDS       T08174                                 
Symbol
KNAG0B03910
Name
(RefSeq) hypothetical protein
  KO
K03010  DNA-directed RNA polymerase II subunit RPB2 [EC:2.7.7.6]
Organism
kng  Huiozyma naganishii
Pathway
kng03020  RNA polymerase
kng03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:kng00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    KNAG_0B03910 (KNAG0B03910)
  09124 Replication and repair
   03420 Nucleotide excision repair
    KNAG_0B03910 (KNAG0B03910)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:kng03021]
    KNAG_0B03910 (KNAG0B03910)
   03400 DNA repair and recombination proteins [BR:kng03400]
    KNAG_0B03910 (KNAG0B03910)
Enzymes [BR:kng01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     KNAG_0B03910 (KNAG0B03910)
Transcription machinery [BR:kng03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Core subunits
     KNAG_0B03910 (KNAG0B03910)
DNA repair and recombination proteins [BR:kng03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      KNAG_0B03910 (KNAG0B03910)
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_1 RNA_pol_Rpb2_2 RNA_pol_Rpb2_7 RNA_pol_Rpb2_4 RNA_pol_Rpb2_3 RNA_pol_Rpb2_5 MRNIP
Other DBs
NCBI-GeneID: 34524482
NCBI-ProteinID: XP_022463078
UniProt: J7RV95
LinkDB
Position
2:751219..754881
AA seq 1220 aa
MSNEEYYDEDPYGFEDESAPITAEDSWTVISSFFREKGLVSQQLDSFNQFVDYTLQDIIS
EDSRLILEQLAQHTTEADNISRKYEISFGKIYVTKPMVNESDGVTHALYPQESRLRNLTY
SSGLFVDVKKRTYEAIDVPGRDLKYELIAEESEDDSERGKVFIGRLPIMLRSKNCYLSDA
TESDLYKLKECPFDMGGYFIINGSEKVLIAQERSAGNIVQVFKKAAPSPISHVAEIRSAL
EKGSRFISTLQVKLYGREGSSSRTIKATLPYIKQDIPIVIIFRALGVIPDGEILEHICYD
VNDWQMLEMLKPCVEDGFVIQDRETALDFIGRRGTALGIKKEKRIQYAKDILQKEFLPHI
TQLEGFESRKAFFLGYMINRLLLCALDRKDQDDRDHFGKKRLDLAGPLLGQLFKTLFRKL
TKDIFRYMQRTVEEAHDFNMKLAINAKTITSGLKYALATGNWGEQKKAMSSRAGVSQVLN
RYTYSSTLSHLRRTNTPIGRDGKLAKPRQLHNTHWGLVCPAETPEGQACGLVKNLSLMSS
ISVGTDPMPIITFLSEWGLEPLEDYVPHQSPDATRVFVNGVWHGVHRNPARLMETLRTLR
RKGDINPEVSMIRDIREKELKIFTDAGRVYRPLFIVEDDEALGHKELKVRKGHIAKLMAT
EYQDIEGGLDEADEYTWTSLLNEGLVEYIDAEEEETILIAMQPEDLEPVIEEENPIDDMD
PAKRIKASQNATTFTHCEIHPSMILGVAASIIPFPDHNQSPRNTYQSAMGKQAMGVFLTN
YNVRMDTMANILYYPQKPLGTTRAMEYLKFRELPAGQNAIVAIACYSGYNQEDSMIMNQS
SIDRGLFRSLFFRSYMDQEKKYGMSITETFEKPQRTNTLRMKHGTYDKLDDDGLIAPGVR
VSGEDIIIGKTTPISPDEEELGQRTAYHSKRDASTPLRSTENGIIDQVLVTTNQDGLKFV
KVRVRTTKVPQIGDKFASRHGQKGTIGITYSREDMPFTAEGIVPDLIINPHAIPSRMTVA
HLIECLLSKVAALSGNEGDASPFTDITVEGISKLLREHGYHSRGFEVMYNGHTGKKLMAQ
IFFGPTYYQRLRHMVDDKIHARARGPMQVLTRQPVEGRSRDGGLRFGEMERDCMIAHGAA
AFLKERLMEASDSFRVHICGNCGLMSVIAKLSHNQFECKGCNNKIDIYQIRIPYAAKLLF
QELMAMNITPRLYTDRSRDF
NT seq 3663 nt   +upstreamnt  +downstreamnt
atgtcgaacgaagaatattacgacgaggatccatatggattcgaggatgagagcgcgccc
attaccgcagaggattcatggaccgtcatttcctcctttttcagggaaaaggggttggtg
tcgcaacagttggactcctttaatcagtttgtcgactacactttgcaggacatcatttca
gaagactcgagactgattttggagcagctggcacaacacaccacggaggcggataatatc
agtagaaaatacgagattagttttggtaaaatctatgttaccaaacccatggtgaacgaa
tcggacggtgtgacgcatgcgttgtatcctcaggagtcccgtttgcgtaacttgacttac
tcttccgggctgttcgttgatgtgaagaagaggacatatgaggctatcgatgttcctggt
agagacttgaagtatgaattgattgcagaagaatcagaggacgacagcgagcgcgggaaa
gtattcatcggtcgtctgccgatcatgctgaggtcgaagaattgttatctaagtgatgcc
accgaatcagacttgtataaactgaaggaatgtccttttgatatgggtggttactttatc
attaacggttctgagaaggtgttgattgcccaagaacgttcggcaggtaacattgtgcaa
gtgttcaaaaaggcagctccatctccaatttcgcacgtggcggagattagatccgcgctg
gagaagggttccaggtttatcagtacactgcaggtcaagctttacggtcgtgaaggtagt
tcttctcgtaccatcaaggcaaccctaccttacatcaagcaagatattcccatcgttatt
atatttagagcgctcggtgtcattccagatggtgagattcttgagcacatctgttacgac
gtcaacgattggcaaatgctggaaatgttgaagccttgtgtggaggatggttttgttatt
caagatcgtgagacagcattagatttcattggtcgtcgtggtacagcactgggtattaag
aaggagaagagaattcaatatgctaaggatatcctacagaaagaattcctacctcacatc
acgcaattggaaggtttcgaaagtaggaaagcgtttttcttagggtatatgatcaacagg
ttgctgttgtgtgcccttgatcgtaaagaccaagatgatcgtgatcatttcggtaaaaag
agactagatttggctggtcctttactgggacagctgttcaaaacgctattcagaaaatta
acgaaggatatcttcagatacatgcagagaactgtcgaagaggctcatgacttcaatatg
aaactggcaatcaatgctaaaactatcacctcagggctgaaatacgcattagcgactggt
aactggggtgaacagaaaaaggctatgtcttcgagggccggtgtttctcaagttttgaat
cgttacacctactcctcgacattgtcacatttgagaagaacaaacacacccattggtcgt
gatggtaagctggctaaacctcgtcagttacacaacacccattgggggctggtctgtccg
gctgaaactcctgaagggcaagcttgtggtttggtcaagaacctatccttgatgtcgtcg
atatcggttggtacggatccaatgccgatcatcacatttttgagtgaatggggtttggaa
cctttggaagactatgttccacaccaatctccggatgctactagagtatttgtcaacggt
gtctggcacggtgtccacagaaacccagctaggttaatggaaacgttgagaactcttaga
agaaagggtgatatcaaccctgaagtttctatgatcagagatattcgtgaaaaggagttg
aagatattcaccgatgctggtagagtttacagaccacttttcattgtcgaagatgatgaa
gctttaggtcacaaggaactgaaggttagaaagggccatattgcaaagctgatggctacg
gagtaccaggatattgaaggtgggctagacgaagcggacgaatacacttggacgtcatta
ctaaacgaaggtttagtcgagtacatagatgccgaagaagaagagactattttgattgcg
atgcaaccagaagatctcgaaccggttattgaagaggaaaaccctatcgacgatatggat
ccagcaaaacgtataaaggcgtctcaaaatgcaacaacctttacccattgtgaaattcat
ccatcgatgattctaggtgttgctgcgtctatcattcccttccctgatcataaccaatct
cctcgtaacacttaccaatccgccatgggtaaacaagcaatgggtgtattcctgaccaat
tacaacgtccgtatggacacgatggccaacatcttgtactacccccagaagccactgggt
accacacgtgctatggaatacttgaagttcagagagcttcctgctggtcaaaatgccatt
gtggcgattgcctgttactccggttacaatcaagaagattccatgatcatgaaccagtcc
tccattgacagaggtctcttcagatctttattcttcagatcctacatggatcaagagaag
aaatatggtatgtctataacagaaacgttcgagaagcctcaacgtacaaataccctgagg
atgaaacacggtacctacgacaaactggatgatgatggtttgattgcgcccggtgttaga
gtttctggtgaagatatcattattgggaaaaccaccccaatttccccagatgaggaggag
ttggggcagaggacagcataccactcgaaacgtgacgcatccaccccattgcggagtacg
gagaatggtattattgatcaagttttggttactactaatcaagatggtctgaaatttgtg
aaagtccgtgttagaaccaccaaggttccacaaatcggtgacaaatttgcctcgcgtcac
ggtcaaaagggtacaatcggtatcacatacagtagggaggacatgcccttcaccgcggaa
ggtatcgttccagatttaattatcaatcctcacgccattccatcgcgtatgacagttgcc
catttaatcgaatgtttgttgagtaaagttgcagccttgtcaggtaacgagggtgatgct
tctccattcacagatattaccgtagagggtatatctaagctgttacgtgaacacgggtac
cattcgcgtgggttcgaagttatgtacaacggtcacaccggtaaaaaactgatggcacaa
attttctttggtccaacctactaccagcgtttgagacatatggtcgatgataagattcac
gcgagagcgcgtggtccaatgcaagtactaacgaggcaacctgtggaaggtaggtctaga
gatggtggtctgagatttggtgaaatggaacgtgattgtatgattgcacatggtgctgcc
gcatttttgaaggaaagattaatggaggcctcggactcgttcagagtgcatatctgtggg
aactgtggtttgatgtcagttattgccaagctgagccataaccaattcgaatgtaaaggc
tgtaacaacaaaattgacatataccagattcgtatcccatacgctgcgaaactgctattc
caagaattaatggcaatgaacatcactccacgtttatacactgaccgttcgagagatttc
taa

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