Huiozyma naganishii: KNAG_0B04650
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Entry
KNAG_0B04650 CDS
T08174
Symbol
KNAG0B04650
Name
(RefSeq) hypothetical protein
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
kng
Huiozyma naganishii
Pathway
kng03022
Basal transcription factors
kng03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
kng00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
KNAG_0B04650 (KNAG0B04650)
09124 Replication and repair
03420 Nucleotide excision repair
KNAG_0B04650 (KNAG0B04650)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
kng03021
]
KNAG_0B04650 (KNAG0B04650)
03400 DNA repair and recombination proteins [BR:
kng03400
]
KNAG_0B04650 (KNAG0B04650)
Transcription machinery [BR:
kng03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
KNAG_0B04650 (KNAG0B04650)
DNA repair and recombination proteins [BR:
kng03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
KNAG_0B04650 (KNAG0B04650)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BSD
PH_TFIIH
ATPD_C_metazoa
DUF7675
Motif
Other DBs
NCBI-GeneID:
34524550
NCBI-ProteinID:
XP_022463146
UniProt:
J7R257
LinkDB
All DBs
Position
2:898806..900683
Genome browser
AA seq
625 aa
AA seq
DB search
MSHSGAATYKKVHGIITIDEDAAPAQLTWRSTDGDKSHVIVLDTIDKLQATPGTSEKMML
RLMSKVDENKNKRVPNGEEVPIKPVTHMFTFNNRDVMDNIKLTLQQIISRYKDIEMDEER
REREASGTAEEQQDQQQQQNYGAPLINTAKLDDSLSKGKLMVNLKLQQSLLKKNKDLMKT
FQETVMNSGLPPDVFWSTRIPLLRAFALSTSQKVGPYNVLSTIKPVASSENKVNVNLSRQ
KIYSIFETYPIVKKAYDDNVPKNFKEQEFWARFFSSKLFRKLRGEKLMQNHRGDVIIDRY
LTLDQEYDRKEDEMLSHPVTKFIDIQGNKEDDPVKMGNRPDFTMQPGMDVNGNNDGTVDI
LKGMNRLSEKMIMALENEYSRSNLQRETLDQVEKENIEINDLEKAYEAQYALIHLKTAKS
EKMQNSLAPADSNRHADIQVGLIPAAIKTHITSVIDELTAKLDLTKVVSEIKGNSEINQR
VVAAVKINAKQAKHNNIDPMLGSFIGSAGSEEAKTDIPQDLLESCRILHSTCCEFLKHFY
IHFQSGEYKRGQTVNELYTHLKDCNAKLNELFEDVLREDGESMANSCTAYLKPTMDSILF
AVKKYEDAFEAANREVATKGMASTA
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atgtctcactccggtgctgccacttacaagaaagtacatgggatcatcacgatcgatgaa
gacgctgctcctgcgcaattaacttggcggtccaccgacggtgacaaatctcatgtaatt
gtgctcgataccattgataaacttcaggccacacctgggactagcgagaagatgatgctc
cggttgatgtccaaggttgacgagaataaaaacaaaagggtacccaatggagaggaggtt
ccgataaagcctgtcacgcatatgtttacatttaataacagagacgtcatggataatatc
aagctgactctacagcagataatatcgcgttacaaagatattgagatggatgaggaaagg
agagagagagaggcatctggcactgccgaggagcaacaggatcagcagcagcagcagaat
tatggtgcaccgctgattaacacggcaaaacttgacgactcgttatctaaaggtaaattg
atggttaatttgaaactacaacagtctctcttaaagaaaaataaggatctgatgaagacc
tttcaagagactgtaatgaactcgggtttgccccccgatgtattttggtcgactcgtatc
cctctacttcgggcatttgcattgtcaacctctcaaaaagttgggccctataacgtgcta
tccactataaaaccagtcgcatcttcggaaaacaaagtgaacgtgaatctgtcgagacaa
aagatttacagtatttttgaaacctatcccatcgttaaaaaagcatatgacgataatgtc
cctaaaaatttcaaggaacaggaattttgggcaaggtttttctcgtcaaaactgttccgt
aagctaagaggtgaaaaattgatgcaaaatcatagaggtgacgttatcatagacaggtat
ctgacgttggatcaagaatacgatagaaaggaagatgaaatgctgagtcatcctgtgacc
aagttcattgatattcaaggtaataaggaagatgatcctgtcaaaatgggtaatagacca
gatttcacgatgcagccggggatggatgtcaacgggaacaatgatggtacagttgatata
ttaaagggtatgaacaggttaagtgagaagatgattatggcgttagaaaacgaatactca
cgatccaatttgcagcgtgaaactttagatcaagtggaaaaagagaatattgaaattaat
gacttggagaaagcctatgaagctcaatatgctctgattcacttgaaaacagcaaagagt
gaaaagatgcagaacagtttggctcctgctgactcaaataggcacgctgacatacaggta
ggtctcatccctgcagcaatcaaaacacatatcacctctgtgattgacgaattaacagca
aaattggacctaacaaaagtggtttctgagatcaaggggaacagtgaaattaatcaacgt
gtcgttgcagcagtcaaaattaatgcaaaacaagcaaaacacaacaatatcgatcctatg
ttggggtccttcattggttcggctggtagtgaagaagccaaaacggatattccgcaagat
cttctcgaaagttgtcgaatacttcatagcacatgttgcgagtttttgaagcatttttac
atccactttcaaagtggggaatataaaagaggtcagactgttaatgaactttacacgcac
ttgaaggactgtaacgcaaagctaaacgaactattcgaagacgttcttagagaggatggt
gaatctatggccaattcatgcaccgcgtacttgaagccgactatggattctattttattc
gctgttaaaaagtatgaggacgcattcgaagcggcaaacagagaagttgccaccaaaggc
atggcttcgaccgcatga
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