Huiozyma naganishii: KNAG_0C01950
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Entry
KNAG_0C01950 CDS
T08174
Symbol
KNAG0C01950
Name
(RefSeq) hypothetical protein
KO
K12585
exosome complex exonuclease DIS3/RRP44 [EC:3.1.13.-]
Organism
kng
Huiozyma naganishii
Pathway
kng03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
kng00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KNAG_0C01950 (KNAG0C01950)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kng03019
]
KNAG_0C01950 (KNAG0C01950)
Messenger RNA biogenesis [BR:
kng03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
KNAG_0C01950 (KNAG0C01950)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNB
Rrp44_CSD1
Rrp44_S1
PIN_4
OB_Dis3
OB_HELZ2
CSD2
Dis3l2_C_term
NB
Motif
Other DBs
NCBI-GeneID:
34524988
NCBI-ProteinID:
XP_022463554
UniProt:
J7RIF2
LinkDB
All DBs
Position
3:<377736..>380726
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AA seq
996 aa
AA seq
DB search
MSTSVSTRKRLSEGLAVTQKVFIRSRNGNATKIVREHYLRNDIPCLSTACQKCSEIVVPN
AANELPKFVLSADPMAIGLGKHYVVLDTNIVLLAIDLLENPSCFSDVIIPQIVLDEVRNR
SYPVYLRLRALCRDSNETKRFIVFHNEFSEYTYINRQKDETINDRNDRAIRQTCEWYGEH
LKETGIKIVLVSNDKLNREAAKSQDSDKYTTLNLNKYVDALPNGEEIKDLIPNVDPKTEA
SLNEEDLNEFTFPEYYSTARIMGGIRNGVLYQGNIQISEYNFLEGAVSLPSFSKPVLIVG
QMNLNRAFNGDQVVVELLPESEWQAPSSVALDSEHFDVNDNPGNEGDEGDDVVASKNPII
SDKQRRMLAKDAIQAQKAQKVRPTARVVAITRRSWRQYVGQIAPNSVDLQTAGTQNVFII
LMDKCLPKIRIRTRRAAELLDKRVVISVDSWPANYKYPLGHFVRDLGTIESAQAETEALL
LEHDVEYRPFSKKVLECLPEEGHDWKAPVSVDDIEANKADPLLAKRKDLRDKLICSIDPP
GCVDIDDALHAKKLPNGHWEVGVHIADVTHFVKPGTALDAEGASRGTSVYLVDKRIDMLP
MLLGTDLCSLKPYVDRFAFSVIWELDENADIINVEFHKSVIRSREAFAYEQAQLRIDDPK
QQDELTLGMRALLQLSIKLKQKRLEAGALNLASPEVKVHMDSETSDPGEVEIKKLLATNS
LVEEFMLLANISVARKIYDSFPQTAMLRRHAPPPATNFEILNEMLQRRKNMSISVESSKA
LADSLDRCEDPKDPYFNTLVRIMSTRCMMAAQYFYSGAYSYPDFRHYGLAVDIYTHFTSP
IRRYCDIVAHRQLAGAIDYEPLSLDHRDKHKMDMICRNINRKHRNAQFAGRASIEYYVGQ
VMKNNESLESGYVIKVFNNGIVVLVPKFGVEGLIRLENLTDDTHSAEFDEVEYKLTFTSK
DSKNRREVFVFDQVQVQVRSVLDPITNKRKAELILK
NT seq
2991 nt
NT seq
+upstream
nt +downstream
nt
atgtctacctctgtatctaccaggaagagactttctgagggcctagctgtgacgcagaag
gttttcattcggtcaagaaacggtaatgccaccaagattgtgagggaacactacttgcgg
aacgatatcccgtgtctttcgactgcctgtcagaaatgctctgagattgttgtgccgaat
gcagcaaacgaattgcccaagtttgtgctttcggcggacccaatggctattgggctcggg
aaacattacgttgtgctagatacaaatattgtgcttttggcgattgatctgttggagaac
ccaagctgtttctcggatgtcatcatcccacagattgttttggacgaggtccggaataga
tcgtacccagtttatctcagattaagagctctgtgtagggacagtaacgagactaaaaga
tttattgtcttccacaacgagttttccgaatacacgtacatcaacaggcaaaaggacgaa
accatcaacgatagaaacgatagggccatcaggcagacttgtgagtggtacggtgaacat
ttgaaggagactgggattaagattgtactagtgtcaaacgataagctgaacagagaggca
gccaaaagccaggattctgataaatacaccactttaaatttgaacaagtacgtcgacgct
ttgccaaacggagaagagattaaagatctgattccaaacgtggatcctaaaacagaggca
tctttgaacgaggaagacctgaatgaattcactttccccgagtactattctaccgctaga
atcatgggtggtattagaaacggcgttctgtaccaaggtaatatccagatatccgagtac
aatttcttggaaggtgctgtgtcactacctagcttctcgaaacctgttcttattgtagga
cagatgaatctgaacagggcgttcaacggtgatcaagttgtcgttgagttgttaccggaa
tctgaatggcaggcaccatcttcagtggcacttgattccgaacatttcgacgtcaacgat
aatccaggtaatgaaggcgatgagggagatgacgttgtagcctctaaaaacccaatcata
tcagacaaacaacgtcgtatgttggccaaggacgctatccaggcgcagaaagcgcagaaa
gttcgaccaactgccagagttgttgccattacaagaagatcgtggagacagtacgttggt
caaattgctcctaactctgttgacttacaaactgccggcactcagaatgtgtttataatt
ttgatggataagtgcttaccaaagatcagaataagaacgagacgtgccgctgaactgctc
gataagagagttgtaatctcagttgattcttggccagcgaattataaatacccattgggg
cattttgtaagagatttgggtaccattgaatctgcacaagcggaaacagaggccctacta
cttgagcacgatgtcgaatacagacccttctcgaaaaaagtgctggaatgtttaccggaa
gagggacatgattggaaggctccagtgtctgtggacgacattgaagctaacaaggcagac
ccattgttggccaagaggaaggacttgagggataagttgatttgtagtattgacccgcca
ggatgtgttgatatcgatgacgcactgcatgctaagaaactgcccaatggtcattgggaa
gtcggtgtccatatcgccgatgttacccacttcgtcaagccaggcacagctctagacgcg
gaaggtgcgtcgagggggacatctgtctatttggtcgataaacgtattgatatgttgccg
atgctgctgggtacagacctatgttcattgaagccatatgttgatagatttgccttttct
gtgatctgggagttggatgaaaatgccgatattataaatgttgaatttcacaaatccgta
attagatctagagaagcattcgcttacgagcaggcccagttaagaattgacgatcccaaa
caacaagatgagttgactttaggaatgagggctctattgcaactgtctatcaaattaaag
caaaaaaggttagaagctggtgctctgaacttggcgtcaccagaagttaaagtccatatg
gatagcgaaacctctgatccaggtgaagttgagataaaaaaactactggcgactaattca
ttggtcgaagaatttatgctgttggccaacatttcggttgcaagaaagatatatgattcc
ttccctcagacggcaatgctgaggagacacgctcctccaccggcaacaaatttcgagatc
ttgaatgaaatgttgcagagaagaaaaaatatgtcgatctcagtggaatcttcgaaagcg
ttggcagactcgttggatcgctgtgaagatccaaaggatccgtatttcaatacattggtg
agaattatgtcaacgagatgtatgatggctgcacaatacttctattcgggagcttactct
tatcctgatttcagacattatggtctagctgtggatatatatacgcattttacctctccc
attagacgttactgtgatattgtggcacacagacaacttgccggtgcgattgattatgaa
cctctaagtttagatcacagagataagcacaaaatggacatgatctgtagaaacatcaac
aggaaacacagaaatgcccaatttgcgggtagagcaagtatagaatactacgttggccaa
gtcatgaagaacaacgaatctttggaatccggttatgtgataaaggtgttcaataacggt
attgttgtactggttcctaaatttggtgttgaaggtttaattaggctggaaaacctgaca
gacgacacacattccgctgagtttgatgaagtggaatataaacttacattcacatcaaaa
gactctaaaaatcggagagaagtatttgtttttgatcaagtgcaagtgcaagttagatct
gtcttggatccaatcacaaacaaacgtaaggctgaactaatattgaaataa
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