Huiozyma naganishii: KNAG_0C03740
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Entry
KNAG_0C03740 CDS
T08174
Symbol
KNAG0C03740
Name
(RefSeq) hypothetical protein
KO
K10747
DNA ligase 1 [EC:
6.5.1.1
6.5.1.6
6.5.1.7
]
Organism
kng
Huiozyma naganishii
Pathway
kng03030
DNA replication
kng03410
Base excision repair
kng03420
Nucleotide excision repair
kng03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
kng00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KNAG_0C03740 (KNAG0C03740)
03410 Base excision repair
KNAG_0C03740 (KNAG0C03740)
03420 Nucleotide excision repair
KNAG_0C03740 (KNAG0C03740)
03430 Mismatch repair
KNAG_0C03740 (KNAG0C03740)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
kng03032
]
KNAG_0C03740 (KNAG0C03740)
03400 DNA repair and recombination proteins [BR:
kng03400
]
KNAG_0C03740 (KNAG0C03740)
Enzymes [BR:
kng01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
KNAG_0C03740 (KNAG0C03740)
6.5.1.6 DNA ligase (ATP or NAD+)
KNAG_0C03740 (KNAG0C03740)
6.5.1.7 DNA ligase (ATP, ADP or GTP)
KNAG_0C03740 (KNAG0C03740)
DNA replication proteins [BR:
kng03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
KNAG_0C03740 (KNAG0C03740)
Prokaryotic type
Elongation factors (archaeal)
Other elongation factors
KNAG_0C03740 (KNAG0C03740)
DNA repair and recombination proteins [BR:
kng03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
KNAG_0C03740 (KNAG0C03740)
NER (nucleotide excision repair)
Other NER factors
KNAG_0C03740 (KNAG0C03740)
MMR (mismatch excision repair)
Other MMR factors
KNAG_0C03740 (KNAG0C03740)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
DNA_ligase_A_C
RNA_ligase
Motif
Other DBs
NCBI-GeneID:
34525158
NCBI-ProteinID:
XP_022463724
LinkDB
All DBs
Position
3:<737968..>740151
Genome browser
AA seq
727 aa
AA seq
DB search
MWKSVCKPLLTNRLTTIHPKMKRQMTLNNFFTSVKKSDTNTPASTTPKKMEKDESPQIPA
TKTAEEKHENMDVDTDPVISSSEVSAKRNSPLTSPSPTPVVSKKIKIQDENNDTKEFYST
VPYADLCNLFQEIEGISSRLAIIKLCSSFLISVMKLDPRNLIPMTYLFINKLGPDYMPGL
ELGLGENLLIKTIAESCGRSLQQIKTKYHEIGDLGQIALEARKVQPTMFKPKPLTVGEVF
QNLKSIASSQGKDSQTKKIKLIKRMLTSCQGVEAKFLIRSLESKLRIGLAEKTVLISLSK
ALLVYEYGESDKDIDMETVENAEQKIRDAFCQVPNYEVVIDSCLKHGIMNLDQHCSLRPA
IPLKPMLAKPTKSISEIFDRFQDQKFTCEYKYDGERAQVHLLEDGTMRIYSRNGENMTER
YPEIHIRDFVTDLSHTKSLILDCEAVAWDKEQNKILPFQVLSTRKRKDVDINEIKVRVCL
FAFDILLHNDEKLINKSLQERRDILHSITKEVTGEFQFATEMTTTNLEELQSFLDQSVKN
SCEGLMVKMLEGEESHYEPSKRSRNWLKLKKDYLAGVGDSLDLCVLGAYFGRGKRTGNYG
GFLLGCYNQDTGEFETACKIGTGFSDEVLQQLHERLKSTVIDLPKATYVFDPSAEPDVWF
EPTLLFEVLTADLSLSPVYKAGSSTYDKGVSLRFPRFLRLREDKGVEDATSSEQIVEMYE
NQANLQQ
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgtggaagagtgtgtgcaaaccccttttaactaatagactgactacaatacatcccaaa
atgaagaggcagatgaccttgaataacttcttcacatccgtgaagaagagcgatacaaat
actccagcatcgacaacaccaaagaaaatggagaaggacgagtcgccgcaaattcctgcc
acaaagaccgcagaggagaaacacgagaatatggatgtggatacggatccagttatctcc
tcctcagaagtctctgcgaagagaaactcgcccctgacttccccatcaccaaccccagta
gtcagcaagaagatcaaaatacaggacgaaaacaacgacacgaaagagttttactctact
gtcccctacgcggatctgtgtaatctgttccaagaaatcgaagggatctcttcaagacta
gcaatcatcaaattgtgctctagtttcctgatctctgttatgaaactagacccgcggaat
ttgatcccaatgacgtacctattcattaacaagctaggtccagattatatgccagggtta
gagcttgggttgggtgaaaacttgctgatcaagacaatcgcggaatcgtgtggacggtct
ttacagcagataaaaacaaaatatcacgagattggagacttgggccagattgcattggag
gcgagaaaagttcaacccactatgttcaaaccgaaaccgttgaccgttggagaggtgttc
caaaatctaaagagcatcgcctcaagtcaggggaaagactctcaaaccaaaaagataaaa
cttattaagaggatgcttacttcatgtcaaggtgtcgaagcaaagtttctcataagatcg
ttggaatcaaaattaaggatcgggcttgcagagaaaactgttttgatttcactctcgaaa
gcattgttagtttatgaatatggtgaatccgataaagatatagatatggagactgttgaa
aatgctgagcaaaaaatcagagatgcattctgtcaggtaccgaattacgaagtcgtcatc
gattcatgccttaagcacggtatcatgaacctggaccaacattgtagtctaagacctgcc
attcctttgaaaccgatgttggcaaaaccaactaaatctatcagtgagatttttgacagg
ttccaagaccagaaatttacctgtgaatacaaatatgacggtgaaagagctcaagtacat
cttttggaggatggaactatgaggatatactcgcgtaacggtgagaatatgactgagcgg
taccctgaaatccacatacgtgactttgtgacggatctgtcacatacgaagtctttgatt
ctggattgtgaagcagtcgcctgggataaggaacaaaataagatcttaccgtttcaagtg
ctgagcacaagaaagaggaaagacgttgatatcaacgagattaaagttcgtgtctgtctc
tttgcatttgatatcctgctacataacgatgaaaaactgataaataagtcgttacaggaa
agacgcgatatccttcacagcatcacaaaagaggtaaccggtgagtttcagtttgcaacc
gagatgacaaccacaaatttagaggagctgcagagctttttggatcaatcagtgaaaaac
tcttgtgagggattgatggtcaagatgttggaaggagaggaatcccactacgaaccaagc
aaacggtcccgtaactggttgaaattgaagaaagattatctcgctggtgttggagactct
ttagatctttgcgtattgggggcatattttggtcgcggtaaacgtaccggtaactacggt
gggttcttacttggatgttacaaccaggatactggcgaatttgaaactgcgtgtaaaatt
gggactggattttcagacgaagtgcttcaacaattacacgaaagattgaagagtacggtc
atcgatttgcctaaggcaacgtatgttttcgatcccagtgccgagccagatgtctggttt
gagccaacattattgtttgaagttttaaccgccgacttgtcgttatctccagtttacaaa
gctggtagttctacttatgataagggcgtctcattgagatttcctcgtttcctgagatta
agagaagataagggcgttgaagatgcaacgtcttcggaacaaattgtggaaatgtacgag
aatcaggcaaatttgcaacaataa
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