Huiozyma naganishii: KNAG_0C04410
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Entry
KNAG_0C04410 CDS
T08174
Symbol
KNAG0C04410
Name
(RefSeq) hypothetical protein
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
kng
Huiozyma naganishii
Pathway
kng03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
kng00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
KNAG_0C04410 (KNAG0C04410)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kng03019
]
KNAG_0C04410 (KNAG0C04410)
03041 Spliceosome [BR:
kng03041
]
KNAG_0C04410 (KNAG0C04410)
Messenger RNA biogenesis [BR:
kng03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
KNAG_0C04410 (KNAG0C04410)
Spliceosome [BR:
kng03041
]
Complex B
Other components
Prp19-related factors
KNAG_0C04410 (KNAG0C04410)
Complex C
KNAG_0C04410 (KNAG0C04410)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
HAT_PRP39_N
Mad3_BUB1_I
TPR_8
MIX
Motif
Other DBs
NCBI-GeneID:
34525223
NCBI-ProteinID:
XP_022463789
UniProt:
J7RJ53
LinkDB
All DBs
Position
3:complement(866411..868936)
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AA seq
841 aa
AA seq
DB search
MPGKQPSKCLERYLQDKDDIAFEYELQKDDTNLVTWQRYLDHWKAQYIEDKDKRPLQHII
WLYERLVAVLYEDIDVWYDYICWIFEHRDSISIKFISGLYKRCLEQVKAPSKTKRLTLDT
LCVNYMKFAVDSLDLTVIRSALDQSLGKITKKQSRLKIWEILISFLQNKLIPLTETAFEG
SDFETQYEKLQFQLYTTLFGDKLQKVDQDGDIWSAQMLKRYLIICPRDRIFDTLALLART
FDYHTIKECFDKYLFKNNNDRTSLSMQMIYLRALERLNLETAYQNLLRALKQNYPEENIK
LLTEETSHYIKLSKLDELCMLLTDELSNTLKFKDFFYIYNYQIDFEQAYNSVVIQELESG
QIQNKTKWETILGEHMTLLESHIESYDMKLSDLKLRQNPHNIDAWKDRVNLFATIKEKCE
VYSQALVTIDPLNVYTPRAFGSLWCDYATVYWTAEDYDSAREIFDTAIKVPFPYLQDLEL
IYANWIEKEVKLLGVERGCNMLSSILKIPDQHEVLIEKFYSHSKTVPAQTVLFNSLKLWT
MYLDFLEASSNVNGLILAYEQIISLKLVTPLLITSYAQFLQTIGQKEETYKVLQRGIDLF
HANPTILFQLWVVLLHQIVDDEDIQTKREEYRDSFEQALSGLNDKVSCEDIYLLYHTFEE
KLEQRSTMRAIDILRRGANSIPQKFTNSKLKLWDMALSEMHDNFGAVACRPIYEECIPQI
PIPRNIKHILQFVQLETEQKEYKRVRELFSYGAQLVPPSKNEDLWKVWDQFEIEHGDRES
YRDMLKLKKKLESELKVDTETVSQAEGGVRFVTSTVPQNRTPLPTDKSSAVSNPEEIDID
I
NT seq
2526 nt
NT seq
+upstream
nt +downstream
nt
atgccaggtaagcagccatcaaaatgtttagagaggtatctacaggataaggatgatatt
gcttttgaatatgaattacagaaggatgatacgaaccttgtgacctggcaaaggtacctg
gaccattggaaggcccaatatatagaagataaggataaaaggcctttacaacatataatt
tggctatatgagaggcttgttgcagttttatacgaagatatagatgtttggtatgactat
atctgctggatatttgagcacagggatagcatctcgataaaatttatcagtggattgtac
aagcgatgtttggagcaagtcaaggccccatcaaagaccaaacgtcttactttggataca
ctttgcgtcaattacatgaaatttgcagtagactccctcgatttgacagtgataagaagc
gcgttagatcaatccttaggtaaaataacaaaaaagcagagccgtcttaaaatatgggaa
atactaatatctttcttgcaaaataaactgataccactaacagaaacggcttttgaaggt
agtgattttgaaactcagtacgaaaaattgcagtttcaattgtatactactctatttgga
gataaattgcagaaggtggatcaagacggcgatatttggtcggctcaaatgctcaaaagg
tatttaataatatgtccacgagacagaatatttgacactttagctttattagcaaggaca
tttgattatcacacgattaaagagtgcttcgataagtatctcttcaagaacaacaacgat
cgtacgtctctttcaatgcaaatgatatatctgcgagctctggaacggttgaatttggaa
actgcatatcaaaatcttctaagagccctgaaacaaaactaccctgaggagaacatcaag
ttgctcactgaggaaacgagtcattatatcaagctttcgaaattagacgaactctgtatg
ctgctcactgatgaactatcaaacacactcaaattcaaggactttttctatatatacaac
taccaaattgacttcgaacaagcctacaacagtgtggtaatacaagagttagaaagcgga
caaatccaaaacaagaccaaatgggaaactattttaggggagcatatgactctgctagaa
agtcatatagaatcatatgacatgaaactaagcgatttaaaattaaggcaaaacccccat
aatatagacgcctggaaagatcgtgtaaacctctttgcaaccataaaagaaaaatgtgaa
gtatattcacaagcacttgtcaccatcgatcctttgaacgtttacacacctcgagcattc
ggatctttatggtgcgattacgccaccgtatattggacagcagaagactatgattctgca
agggaaatatttgacaccgcaattaaggtcccgttcccatacttacaagatctagagctg
atatatgcaaactggattgaaaaggaagtaaaacttcttggtgtagagagaggttgtaac
atgctcagttcgattttaaagatccccgaccaacacgaagtgctcattgagaaattctat
agtcatagtaaaactgttcctgcacaaactgttttattcaattctctaaaactttggaca
atgtatctagattttttggaggcgagcagcaatgtgaacggtttgatcttggcttacgag
cagataatatcactaaaactggtaacacctcttctaataacaagttacgctcagtttttg
caaaccattggccaaaaagaggagacctacaaagttcttcagagaggtattgaccttttt
cacgctaatccgaccattttgttccagttatgggttgttcttttacaccaaatagtcgat
gatgaagatatacaaaccaagagggaggagtatcgtgactctttcgaacaggcgttatct
ggcctgaatgataaagttagttgcgaggatatatacttgctttatcatacgtttgaagag
aaattggaacaaaggtccacgatgagagcaattgatatattaagaagaggggcgaattca
attcctcaaaaattcaccaatagtaagctcaaattgtgggatatggctctgagtgagatg
cacgataattttggagctgttgcttgcagacccatatatgaagagtgcattcctcaaatt
cctataccgcgaaatatcaagcacatcctccaatttgtccaattggaaacagaacagaaa
gagtacaaacgtgttagagagctattttcatacggtgctcagcttgtgcccccttctaaa
aacgaagatttatggaaagtatgggatcagttcgaaattgagcacggtgacagggaatcg
tacagagatatgctgaaacttaagaagaaactggagagtgaattgaaggtcgacaccgaa
acggtcagccaggctgaaggaggtgtgagatttgtcacatccacagtaccacaaaatcgt
acacctcttccaacagataagtccagtgcggtaagcaatcccgaggagatagatatagat
atttag
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