Huiozyma naganishii: KNAG_0C05720
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Entry
KNAG_0C05720 CDS
T08174
Symbol
KNAG0C05720
Name
(RefSeq) hypothetical protein
KO
K14326
regulator of nonsense transcripts 1 [EC:
5.6.2.5
5.6.2.3
]
Organism
kng
Huiozyma naganishii
Pathway
kng03013
Nucleocytoplasmic transport
kng03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
kng00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
KNAG_0C05720 (KNAG0C05720)
03015 mRNA surveillance pathway
KNAG_0C05720 (KNAG0C05720)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kng03019
]
KNAG_0C05720 (KNAG0C05720)
Enzymes [BR:
kng01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
KNAG_0C05720 (KNAG0C05720)
5.6.2.5 RNA 5'-3' helicase
KNAG_0C05720 (KNAG0C05720)
Messenger RNA biogenesis [BR:
kng03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
KNAG_0C05720 (KNAG0C05720)
mRNA cycle factors
Common to processing body (P body) and stress granule
KNAG_0C05720 (KNAG0C05720)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF1_Zn_bind
AAA_12
AAA_11
UPF1_1B_dom
AAA_30
AAA_19
UvrD-helicase
ResIII
SLFN-g3_helicase
NPHP3_N
DEAD
Helicase_RecD
nSTAND3
PhoH
Redoxin
AAA_22
AAA_16
Flavi_DEAD
ATPase
Motif
Other DBs
NCBI-GeneID:
34525350
NCBI-ProteinID:
XP_022463916
UniProt:
J7R497
LinkDB
All DBs
Position
3:1106051..1109053
Genome browser
AA seq
1000 aa
AA seq
DB search
MMDSSSRQGESQSGEPSQKPRDRSMSSTGTDRAGSVNDHIEENPGIALVEDPLLEVEDAP
SAQLDGAMGPEHTHQDQESMAVASSAVECACAYCGVDQASSVVKCNVCSKWFCNSKNGTN
SSHIVNHLVLSHHSVVSLHPESDLGDTVLECYQCGRKNVFLLGFVSAKSEAVVVLLCRMP
CAQGKNPNWDTDQWLPLIQDRQFLPWVAAEPADENKLAARLITPSQISKLEAKWRSNRDA
TINDIETTEEQESIAPLLLRYQDAYEYQRSYGPLIKLEADHDKQLKESQALEHISVSWSL
ALNNRHLVSFALSTYESNELKVAVGDEMSLWYSGLQNPDWEGRGYIVRLPNSYQDTFTLE
LKPSKTPPPTHLTTGFTAEFIWKGTSYDRMQDALKKFAVDKKSISGFLYYKILGHEVVDV
SFDVPLPKEFSISHFAHLNASQSNAVKHVLERPLSLIQGPPGTGKTVTSATIVYHLAKIH
KDRILVCAPSNVAVDHLASKLRDLGLKVVRLTAKSREDVESSVSDLALHNLVAKSSQGEL
KKLLKLKDEVGELSAVGTRRFVKLVKKAELEILAKADVVCCTCVGAGDKRLDTRFRTVLI
DESTQATEPECLIPIVKGAKQVILVGDHQQLGPVILERKAADAGLKQSLFERLISLGHVP
IRLEVQYRMNPHLSEFPSNMFYEGTLQNGVTIEQRTVLNSTFPWPIHGVPMMFWANYGRE
EISGNGTSYLNRIEAMNCERIITKLFRDGVKPEQIGVITPYEGQRAYVLQYMQMNGAMDK
SLYLKVEVASVDAFQGREKDYIILSCVRANEQQAIGFLRDPRRLNVGLTRAKYGLVILGN
PRSLSRNLLWNHLLVHFREKGCLVEGALDNLQLCTVQLTKLPPRKRGGNGNKDANQFEID
VNTRTSIDDFDLQSLMSFGAPEGANAFNNVFTANDDFSSFLNNGYWNFQNVEQDTEAAKG
NNNVYQKEGHPLNSNYAGQLRDEDENTTEAMNKGFSSLNI
NT seq
3003 nt
NT seq
+upstream
nt +downstream
nt
atgatggattcctcttcgcgacagggagagtctcagtcaggggaaccgtcacagaagcca
cgcgacagaagcatgagctctacaggaacagacagggcaggctccgtcaatgatcacata
gaggaaaatccaggcattgcgctcgtcgaggacccgctgctagaggtcgaagatgcacca
tcggcacagctggacggtgcaatgggtccagaacacacccaccaggaccaggaaagtatg
gcggtggcgagctccgcggtggagtgtgcgtgtgcctactgtggggtcgaccaggcgtcc
tccgtggtcaagtgcaacgtgtgtagcaagtggttctgtaactcgaagaacggcaccaac
agctcacacatcgtcaaccacctcgtgctatcgcaccacagcgtcgtgtccctgcatccg
gagtcagacctcggagacacagtcctcgagtgctaccaatgcgggaggaagaacgtcttc
ctcctcgggttcgtctcagcaaagagtgaggccgtcgtcgtgctgctttgcagaatgccc
tgcgcgcaggggaagaacccaaactgggacacggaccagtggctgcccctcatccaggac
agacagttcttgccctgggtcgcagcggaacccgcggacgagaacaaactcgctgcaaga
ctcatcaccccaagtcagatctcgaagttggaggccaaatggaggtccaatagggacgcc
acgataaacgacatcgagaccaccgaagaacaggagagcatcgcacctttgctcctgaga
taccaggacgcgtacgagtaccaaagatcgtacggcccgttgatcaaactggaggccgac
cacgacaagcaacttaaggagtcacaggcattggaacacatttccgtttcttggtccctc
gccctgaataatagacacttggtctccttcgcgctgtccacttacgaatcaaacgaactg
aaggtggctgtcggcgacgagatgtccctgtggtactccggattgcaaaatccagattgg
gagggtagagggtacattgtgcgcttgcccaacagttaccaggacacgtttactttggaa
ctgaaaccaagcaagacaccacccccaactcatctgactacagggttcacggcagagttt
atctggaagggtacatcgtacgacagaatgcaagatgcactgaagaaattcgccgtcgac
aagaaatctatatccgggttcctttactacaagatcctaggccatgaggtcgtcgacgtc
tcgttcgacgtgccgctaccaaaggaattctcaatatcgcatttcgcacacttgaacgca
tcgcaatcaaacgcagtgaagcacgtcctggagcggccactgtcactgattcagggtcca
ccgggtaccgggaaaacagtcacatcggctaccatcgtgtaccatctggccaagatccac
aaggacagaatcctagtatgcgccccatcaaacgttgccgtggaccacttggcctccaag
ttgcgcgacttggggttgaaagtcgtaagattgaccgcaaagagcagggaagacgtagaa
agctccgtgtcagatttggcgttgcacaacttggtcgcaaagtcttctcaaggcgagtta
aagaaactgctgaaactgaaggatgaggtgggggaactgtccgcagtgggtactagaagg
tttgtcaaactggtgaagaaggcagaattggagatccttgcaaaggcagacgtcgtctgc
tgtacctgtgttggggcaggtgataagagacttgacacaaggttcagaacggtgctgatc
gacgagagtacgcaggctacggaaccggaatgtctgattccgattgtgaagggcgccaaa
caggtcattcttgttggtgaccaccaacagctgggacctgtcattttagagaggaaggca
gctgatgccggcctgaagcagtctctgtttgaaaggttgatatcgctgggccacgttcca
atcagactcgaagtacagtaccgtatgaacccgcacctaagtgaattcccaagtaacatg
ttttatgagggaaccttgcaaaatggtgttaccatcgaacaaagaaccgttctgaacagc
accttcccatggccaatccacggcgtcccaatgatgttttgggcgaactatgggagagaa
gaaatttcagggaatggtacctcgtatctgaacagaatcgaagcgatgaactgtgaacgg
atcattacaaaactcttcagggacggggtgaaaccagaacaaatcggtgtcattacgcca
tacgagggacagagagcatatgttctacagtacatgcagatgaacggtgcaatggacaaa
agcttataccttaaagtggaagttgcgtctgttgatgcgttccaagggcgtgagaaggat
tacattattctctcgtgtgtccgtgccaatgaacaacaagcaattggtttcttaagagac
cctcgtcgtctgaacgtgggactgacaagagctaaatacgggttggtgattttagggaac
ccgagatcgttatcgcgaaacctactatggaaccatcttttagtacatttcagagagaaa
ggttgtctggtagaaggtgccttggataacttgcagctgtgcactgtgcaattaaccaaa
ttgccaccgaggaaaagaggaggaaatggtaacaaagatgcaaaccagtttgaaatagat
gtaaacacccgtacttctatcgatgactttgacttacaaagtttaatgtcttttggtgcc
ccagaaggcgccaacgcgtttaataatgtcttcactgccaacgacgacttctcttcgttc
ttgaataacgggtattggaacttccaaaacgttgaacaggatacagaagcggccaaagga
aacaacaacgtctaccaaaaggaaggccatccactgaactcaaactatgcaggtcaattg
agagacgaagatgaaaatactactgaagcgatgaataaaggattttcatctttaaatatt
tag
DBGET
integrated database retrieval system
