Huiozyma naganishii: KNAG_0D00560
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Entry
KNAG_0D00560 CDS
T08174
Symbol
KNAG0D00560
Name
(RefSeq) hypothetical protein
KO
K12814
pre-mRNA-splicing factor ATP-dependent RNA helicase-like protein PRP2 [EC:
5.6.2.6
]
Organism
kng
Huiozyma naganishii
Pathway
kng03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
kng00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
KNAG_0D00560 (KNAG0D00560)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
kng03041
]
KNAG_0D00560 (KNAG0D00560)
Enzymes [BR:
kng01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
KNAG_0D00560 (KNAG0D00560)
Spliceosome [BR:
kng03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
KNAG_0D00560 (KNAG0D00560)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
DEAD
HA2_N
AAA_22
HA2_C
AAA_19
nSTAND3
AAA_30
Cas3-like_C_2
T2SSE
ABC_tran
SLFN-g3_helicase
PhoH
Helicase_RecD
Motif
Other DBs
NCBI-GeneID:
34525497
NCBI-ProteinID:
XP_022464054
UniProt:
J7RJX3
LinkDB
All DBs
Position
4:78466..81108
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AA seq
880 aa
AA seq
DB search
METGGTGKRRIRRRFDDESVDRSAELPAGADSQRDDGERFTADTSVFKEPVLPKVSRYNN
EPAEIQKYKRLRRELAFLQRKVQQVGFDRLSEHEQKEIELKKDLLQLMESKSKVESNTEG
FVLAGTTDETSFKNGSPDSMKPRPMKEDNKSRQQMWEERVLSYAVAKNDSDEIYVDGSKQ
YDYVFDDSAMINFTSDVEDTVPGGEDSSEGDEESDEEDEATTKYAKIQEAKKSLPVYHHR
ARVMKAIQDNQVLIIVGETGSGKTTQLPQYLVEDGYTQDGKYQVGVTQPRRVAATSVAAR
VAEEMDVKLGREVGYSIRFDDKTTPGKTVLKYVTDGMLLRECLTDPDLKKYSCIVIDEAH
ERTLATDILLGLLKNILARREDLKVLISSATMNTAKFSKFFGDCPILTIPGRRYPVNVHY
TLQPEGNYINAAITTVFQIHTTQATDGDILLFLTGQEEIESTREKIEQIASKLGTKIPQL
IIAPIYANLPQDQQALIFEPTPENCRKLVIATNIAETSLTIDGIKYVIDPGYVKENSYVP
STGMTQLLTVPCSRASIEQRAGRAGRVGPGSCFRLFTKWSFENELEMMPKPEILRTNLSN
TVLLLLSLGVMDLLNFPFVDKPSIPALTKSLESLYVLGALSNRGQITELGKMMCVFPCEP
EFAKVLHTASADEKCNGVLEECLSIVSMLHETTSLFIGNKRNAAARIVSETEGDHLLYLE
VFRQWRDSGFSRTWCQDHRIQFKTMCRVRNIRSQLSRCCQKLGLSAQSKTAAIKLSEVIP
RITRSFISGFPTNVVQLTNSGNYKMLGRQTGALTVSIHPSSVVFQNYKENAKKPDKYLLY
QQLMLTSKEFIRDLLPVTQESWLTETVPQVYQELLGKRQP
NT seq
2643 nt
NT seq
+upstream
nt +downstream
nt
atggagactggcgggaccggtaaacgaagaattcgaaggaggtttgatgatgagtcggtg
gatcggagcgctgaactgccggctggtgcagattcgcaacgggacgatggagagagattt
accgcggatacaagtgtgttcaaagagccagtgttgccaaaagtgagtcggtataacaac
gagccagcagagatccagaaatacaaacgattgaggagagagcttgcgtttctgcagcgg
aaggttcaacaggtcgggttcgatcgcttgtctgaacatgagcagaaagagatagagttg
aagaaagacttgctacaactcatggaatctaagagtaaagtcgagtctaatacggagggg
tttgtcttggctggtacgacggacgaaacctcatttaagaatggttcccccgacagtatg
aaacctcgtcccatgaaagaggataataagtcgaggcagcagatgtgggaggagcgggtg
cttagttatgcagtggccaagaacgactccgatgaaatatacgttgacggttcgaaacag
tacgattatgttttcgacgatagcgccatgatcaattttaccagcgatgtagaagataca
gtccctggtggggaggatagctctgaaggtgatgaagagagtgatgaggaggatgaagcc
acgaccaaatatgcaaaaatccaagaggccaagaaaagtttgcccgtttaccaccataga
gcaagagtgatgaaggcgatccaagacaaccaggtactcataatcgttggtgagacaggt
tctggtaaaactactcagctgccacaatatttggtcgaagatgggtacacgcaagatggg
aaatatcaagtgggtgtgactcaaccaagacgtgtggcagcgacttccgtcgcggcgagg
gtagcagaagagatggacgttaaactcgggcgggaggttgggtactctatcagatttgac
gataaaacgacccccggtaaaactgtgttgaagtatgtcacagacggtatgttgttaaga
gaatgtctgacggaccctgatttgaaaaaatattcctgtatagtgatcgatgaagctcat
gaacgtacactagcaacggatatattgcttgggttactgaaaaatattcttgctaggaga
gaggatcttaaagtactgatctcgtctgccactatgaacactgccaaattttccaaattt
tttggggactgtccgatcttgaccataccaggcaggaggtacccagtaaatgtgcattac
acattacaaccggagggaaattacatcaatgctgcgataacgacagtcttccagatccac
acaactcaggcaaccgatggggacattttgttatttctgactggtcaagaagagatagag
agtacaagggaaaagattgaacagattgcgtcaaaactgggtactaagatcccacagctg
atcattgcccccatatatgccaatttaccacaagaccaacaggcgctaatcttcgaaccg
accccagagaactgcaggaaactggtcatagcgaccaacattgcggaaacatctttgaca
attgatggtatcaaatatgtgattgaccccgggtatgtgaaggagaactcgtatgttccc
tctacgggtatgactcaattattgactgtcccctgttccagggcgtctattgaacagcgg
gccggtagagccgggcgggttggacccggttcatgttttcggctatttaccaagtggtcc
tttgaaaacgaattggagatgatgcccaaaccagagattttgagaaccaatctgtccaat
actgtactgctgttgctgtcccttggagtcatggatcttttgaacttccctttcgtagat
aaaccgagtatccccgcgcttaccaaatctctcgagagcctgtacgttctcggtgccctg
agtaaccggggtcagatcacagaactcgggaaaatgatgtgcgtctttccctgcgagccg
gagttcgcaaaagtactgcatacagcctccgctgacgagaaatgcaacggtgtcctggag
gagtgtctaagcattgtatcgatgttacacgagacaacgtcgctctttatcgggaacaag
aggaacgccgcggcacgtattgtcagcgagaccgagggagaccacctgctgtatttggag
gtcttcaggcaatggcgggactccggtttctcccgaacttggtgtcaggaccaccgtatc
cagttcaagaccatgtgccgggtccgcaacatccggtctcaactatcccgatgctgccaa
aaactaggtctttccgcacaaagcaaaacggcggcgatcaaactttcggaggtaatacca
cgcataacgcgcagtttcatctccgggttcccgacaaacgtggtccagttgacgaattcg
gggaactacaagatgctcgggagacagactggcgcactgacagtgagcatccacccgtcc
agtgttgtgttccagaactacaaggaaaacgccaagaaaccagacaagtaccttctgtac
cagcagctgatgctgacgtcaaaagagttcatccgcgacctgttaccggtcacccaagaa
tcctggctcacagaaaccgtcccccaggtgtaccaagagctgttggggaaacgacagccc
tga
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