KEGG   Huiozyma naganishii: KNAG_0F00540
Entry
KNAG_0F00540      CDS       T08174                                 
Symbol
KNAG0F00540
Name
(RefSeq) hypothetical protein
  KO
K02324  DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
Organism
kng  Huiozyma naganishii
Pathway
kng03030  DNA replication
kng03410  Base excision repair
kng03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:kng00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    KNAG_0F00540 (KNAG0F00540)
   03410 Base excision repair
    KNAG_0F00540 (KNAG0F00540)
   03420 Nucleotide excision repair
    KNAG_0F00540 (KNAG0F00540)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:kng03032]
    KNAG_0F00540 (KNAG0F00540)
   03400 DNA repair and recombination proteins [BR:kng03400]
    KNAG_0F00540 (KNAG0F00540)
Enzymes [BR:kng01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     KNAG_0F00540 (KNAG0F00540)
DNA replication proteins [BR:kng03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase epsilon complex
    KNAG_0F00540 (KNAG0F00540)
DNA repair and recombination proteins [BR:kng03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase epsilon complex
      KNAG_0F00540 (KNAG0F00540)
SSDB
Motif
Pfam: DUF1744 POL2_thumb DNA_pol_B_exo1 zf-DPOE DNA_pol_B DNA_pol_B_exo2 RNase_H_2 Viral_DNA_bp zf_DPOE_2
Other DBs
NCBI-GeneID: 34526438
NCBI-ProteinID: XP_022464969
UniProt: J7RME7
LinkDB
Position
6:83727..90368
AA seq 2213 aa
MSAYMGPRARKGASTARFVKGAQGTANGGGANPFAVVAQQLLQTQRVDEIDAVMGFERYR
PPQFSGGDASGQVPGRVGWLVNMHPVVVSLESVHGSSSGSGAGGIAGVDFYFLDEEGGGF
KSTLTYDPYFFVTVTDDRMLNDVEEYLKKLLEGTLKNIEALQKEDLSLDNHLIGLKKPLI
KLSFVNNNQLFEARRLLRPILQENSNTKTQRNIYRPHAVENTVGDAKRFIDEIREYDVPY
HVRVSIDRDVRVGKWYNVTDLGFLECPEKVAFADPVVLAFDIETTKPPLKFPDAAVDQIM
MISYMIDGDGYLITNREIISEDIEDFEYTPKPEFRGQFAIFNEQDELALLQRFFEHIRDV
RPTVISTFNGDFFDWPFVETRARIHGLDMFEEIGFAADSEGEYKSAYCCHMDCFRWVKRD
SYLPQGSQGLKAVTQAKLGYNPIELDPELMTPYAYTKPQQLSEYSVSDAVATYYLYMKYV
HPFIFSLCSIIPLNPDEVLRKGTGTLCEMLLMVQAYKNNILLPNKHTDPIERFYDGHLLE
SETYVGGHVESLEAGVFRSDLKNDFTIDPTAVDELLADLPATLKFCIEKENNCSLDKVTN
LEEVKEQITNSLLQLKENRKTHELPLIYHVDVASMYPNIMTTNRLQPDSIKTERDCASCD
FNRPGKTCARRLKWAWRGEFFPAKMDEYNMIKRALQNETFPNKNKFSQKPILTFDELSYA
DQVAHIKKRLSEYSRKVYHRVKVSEVVEREAIVCQRENPFYVNTVRSFRDRRYEFKGLAK
TWKGKASKIDPADKHEKDEATKMVVLYDSLQLAHKVILNSFYGYVMRKGSRWYSMEMAGI
TCLTGATIIQMARSLVERVGRPLELDTDGIWCILPKSFPDNYTFKLENGKKLYLSYPCSM
LNYRVHQQFTNDQYQELVDPEKLKYETHSDNSIFFEVDGPYRAMILPTSKEEGKGIKKRY
AVFNEDGSLAELKGFELKRRGELQLIKNFQSDIFKLFLEGDSLQNCYNAVATVANRWLDV
LDTEGKMLEDEDLIELICENRSMSKTLKEYEGQKSTSITTAKRLGDFLGEEMVKDKGLQC
KYIISSRPANAPVTERAIPVAIFSADIAIKRSFLRRWTADPSLDNFDIRTIIDWGYYKER
LGSTIQKIITIPAALQNVENPVPRVVHPDWLKKKINTMNDKFKQTSLNRFFTKTSDIPVA
GKIQDIEDILYKGTEEPRPKKLSGKVSRKNRLAKRKRDQKEVEDSLTLPKECPSMHEDYV
GWLKYQKIKWKIQARDRKRRTQLFGDNNRTVDRSALGNMVRKQAETYANATWEILQYRKT
NEPGVLEVHILINGKIQQLRFKIPKTVYVKLKTNVASLGPIQDCMVEKSNATLPNHPQIN
RYPSGSLFKLTLPELVYREELEKRSSVLNDDNVLGIFEGAVDITQHAVMELGSSVRFNSN
TLGSLGKGLQNGFDMKSLNMTDNERYMSRFKSDTAYLLHFTTNIGYEFFILFKSWNEEIE
IFTLKPSIQAQGITEQMITKIYSDLFEKRMDKLREFSRFIDFKETVAFNLHSFTDLNKLT
RHLTVSIGKMKEEKGQQFLMLLKSPSNKKLTSKIKNLRTLPVLELATTPLTLPQLNWQSN
LCSKIINQIFSCSSWVAHMVKVARYSNIPVCNLQLDNMGYVIDVLYARKLRHENIVLWWN
ENGPLPDLAGIEKEYDPNISGIMQELSFPDVNTPDIYDKTVLEIQIRNLTINTVLASTLI
NEAEGSDLTNVESSAMNSASSEKNSVFVEDAFNAESLTVLKNLLKDWWEEALNEDFTADL
LVNAFISWVQNPESCLFDILLRYHVHNLTRKSLLQLLNEFNSLGSTVIFADRNKLMVKTN
KFVPENCYAYSEYMVKAVKVNPLFKYIDLRIEKYWDVLIWMDKFNFGGLACSTIQDKDEQ
DYDAYSVWQIKNTLPPIFQTEFDDWMAIILDSMTKTKRTYFEKNMGTQRATQIIQTKKSS
DGGDEEVNSLSNFTELFAKPLIKRVKKLYRNQQEFILDPQYLEDYKFPELPGLYLPLKNP
LLELVKDLCQVMSLSKITLLEVRALRKELLKLFEIREFAKEAEFSNPCKNLIINEVTCRY
CFHATSIDFCRMDSSGDFSCMNCHKDFDRDLLQEFLIQKLCSESDNFVSQDLHCSKCHKI
KMDYMSTHCTCSGKWVNSAKTLDLENQVVIYRQVADYFKFDLLKDTIQELHQH
NT seq 6642 nt   +upstreamnt  +downstreamnt
atgtctgcgtacatgggaccgagggcacgcaagggagcgtcgacagcgcgatttgtgaag
ggtgcgcaggggaccgctaatggcggtggcgcgaacccgttcgcggtcgtcgcgcagcag
ttgttgcagacgcagcgggtcgacgagatagacgccgtgatggggtttgaacggtacaga
ccgccgcagttcagtggcggggacgcctctgggcaggtgcccgggcgcgttggatggctg
gtgaacatgcaccccgtggtcgtgtcgctggagtccgttcacggttcctccagtggtagt
ggtgccggtggtatcgccggtgtggacttctactttctagatgaggaaggtggtgggttc
aagtccacgctcacttatgatccttacttctttgtgactgtgacggacgatcgaatgctc
aacgatgtagaagagtacctcaagaaattgctcgagggaacgctaaagaacattgaggcc
cttcaaaaggaggatctgtccctagacaaccatctgatagggttgaagaaaccgctcatc
aaattgtcgtttgtcaacaacaaccagctgttcgaggcaagaagactacttagacccatc
cttcaagagaactccaataccaagacacaacggaacatatacagaccccacgcagtggaa
aacacagtgggagatgctaaaagattcattgatgaaattagagaatacgacgtgccctac
cacgtaagagtgtccatcgacagggacgtccgtgttgggaaatggtacaacgtgacggat
ctcgggttcctcgagtgccctgagaaagtcgcgttcgcggacccagtggtccttgccttc
gatatcgagacaacgaagccaccgctcaagttcccagacgccgcagtggaccagatcatg
atgatctcgtacatgatcgacggagacgggtacctcatcactaacagggagatcatttca
gaggacattgaggatttcgagtatacgccgaaaccggagttccgcggccagttcgccatc
ttcaacgagcaggacgagctcgcgttgctccagcggttcttcgaacacatcagggacgtc
cgtccgacggtcatctcgactttcaacggtgacttcttcgattggcccttcgtcgagacc
agagcaaggatccacggactcgatatgttcgaagagatcgggtttgcggcagactcagag
ggggagtacaaatccgcatactgttgccacatggactgtttcaggtgggtcaagagggat
tcgtacctcccacaggggtcccaaggtcttaaagcggtcacgcaggcgaaattggggtac
aacccgatcgaactagacccagaactcatgacaccgtacgcttacacgaaaccacaacag
ctatcggagtactccgtttcggacgcagtagcaacgtactatctgtacatgaagtacgtc
cacccgtttatcttctccctgtgcagtatcattcctctaaacccagacgaagtgctcagg
aaggggacgggtacgctctgtgagatgctgctcatggtacaggcgtacaagaacaatatc
ctgctaccgaacaagcacacggacccgatagagaggttttacgatggacatttacttgaa
tcggagacatacgtcggagggcacgtcgagtccctagaggccggtgtcttcagaagcgat
ttaaagaacgatttcacaattgaccccacagcggtcgatgaactgctcgcggacttacca
gcgactctaaaattctgcattgagaaggagaacaactgctccctcgacaaagtgaccaac
ctcgaagaggtcaaagaacaaatcacaaacagcttgctgcaactcaaggaaaacaggaaa
actcacgaattgcctctcatctaccacgtcgacgtcgcatccatgtacccaaacatcatg
acgacaaacagattacaaccggacagtatcaaaacggagagggactgtgccagttgcgac
ttcaatagaccgggcaagacgtgtgcccgcagactgaagtgggcatggagaggcgagttc
tttccggccaagatggacgagtacaacatgatcaaaagagcgctgcagaacgagactttc
cccaacaagaataagttctcacagaagccgatcctgactttcgacgaactgagctacgcc
gaccaggtggcacacatcaaaaagagactcagtgagtactccaggaaagtctaccacaga
gtcaaagtgtccgaggtcgtcgagagagaagcgatcgtctgccaaagggaaaacccattt
tacgtcaacacggtgcgttcgttccgtgacagacggtacgaattcaagggactcgcgaaa
acgtggaaggggaaggcatctaagatagatcctgctgataaacacgaaaaggacgaggcg
accaaaatggttgtgttgtatgactccttgcaacttgcacacaaagtcatcttgaattcc
ttctacggttacgtcatgaggaaaggttctcgttggtattcgatggaaatggcagggata
acgtgtctgacgggtgctactatcatccaaatggcaagatcccttgtagagagagtcgga
agaccgttggagctcgatacagacggtatttggtgtattttgcccaaatctttcccggac
aattacactttcaagcttgaaaacggaaagaaattgtacctgtcgtacccgtgctccatg
ctgaattacagagtgcaccaacagtttaccaacgatcaataccaagaactggtagaccct
gagaagcttaagtacgagacacactctgacaactccattttttttgaagtggacgggcct
tacagggctatgattttgcccacctcaaaggaggaaggtaaaggtatcaaaaaaagatac
gccgtgttcaacgaggatgggtccctagcagagttgaagggttttgaactgaagagacgt
ggtgaattacagttgatcaaaaactttcaaagtgatatcttcaagttgttcttggagggg
gattccttgcaaaattgttataatgcggttgcaacggtggccaacagatggctcgacgtt
cttgatacggaggggaaaatgctggaggacgaagatttgattgaacttatttgcgagaat
agaagcatgtcgaagactttaaaggagtacgagggtcaaaaatcgacttctatcaccaca
gccaagcgtctcggtgacttcttaggtgaagaaatggtgaaggacaaaggtctacaatgt
aaatacattatcagtagcagaccggcaaatgcgccagtcacagaaagggccattcccgtt
gccattttctccgctgatatcgccatcaaacgatctttcctaagacgttggaccgctgac
ccatccctggataactttgacatccggacaattatagactggggatactacaaggaaaga
ctgggttccactatccaaaaaattattacaattcctgcagcgctacagaatgtcgagaac
ccagttccaagggttgtccatcctgattggttgaagaagaagatcaataccatgaacgac
aaattcaaacaaacctctctaaacagattcttcaccaaaactagcgacattccagtagca
ggcaaaatccaggatatcgaggacatactttataaaggtacggaagagccccggccaaaa
aaattgagtggtaaagtttccaggaaaaacagacttgcaaagaggaagcgtgatcaaaag
gaagttgaagactcattgacgcttccaaaagaatgcccatcgatgcatgaggattatgta
gggtggctaaaatatcagaaaattaagtggaaaattcaggcaagagacagaaagcgcaga
acccaactatttggtgataataatagaactgttgatagatcggcattgggtaatatggta
aggaagcaagcagaaacgtacgccaatgctacgtgggaaattctgcaatatagaaagaca
aacgaacccggggtattagaagttcatattctcatcaatggtaaaatccagcaattgcga
ttcaagatacccaagacagtctacgttaagctcaagacaaatgtggcatcacttggtcca
attcaagattgcatggtagaaaaatcgaacgccactcttccaaaccacccgcaaatcaat
cgctatccttctgggagtttgttcaaattaactctcccggaattagtttatcgtgaggag
ctcgagaaacgatcaagtgtgttaaacgatgataatgtacttggtatatttgagggagct
gtggatattactcaacatgcagttatggagttaggctcttctgtcaggttcaattcaaat
acacttggctcgcttgggaagggacttcagaacggttttgacatgaaaagtctaaacatg
accgataatgaacggtatatgagcagattcaaaagcgataccgcttacttactgcacttt
acaactaacattggatacgaatttttcattctatttaaatcgtggaatgaggaaattgaa
atattcaccctaaaaccgtcgatacaggcacaagggattactgaacagatgatcacaaag
atttactcagatttatttgagaagagaatggataaactaagagagttttcaagatttatc
gatttcaaagaaacggtggcatttaatctacacagtttcacagatctgaacaaattgacg
agacacttaactgtgtccattggtaagatgaaagaggaaaaaggccaacaattcttaatg
cttttgaagtctccttctaacaagaagttaactagcaaaataaaaaatctgcggacccta
ccagtgctcgagcttgctacaacaccactaacgctgcctcaactcaactggcaatccaat
ctttgttctaaaatcatcaaccaaatattttcatgcagctcatgggtggcccatatggtc
aaagttgctcgttatagcaatattccggtctgtaacctgcagctggataacatgggctat
gttatcgatgttttgtacgccagaaagctaagacacgaaaatatagtattgtggtggaat
gagaatggcccgcttccggatttggctggtattgaaaaggagtacgacccgaatatttca
ggaatcatgcaagagctttctttcccagatgtcaatacccctgacatttacgataaaact
gtgcttgaaattcagatccgtaatttgacgatcaataccgttctggcatccactttgatt
aatgaagctgaaggaagcgacctcacaaatgttgagtcgagcgctatgaactcagctagc
tctgagaagaactctgtttttgttgaagatgcttttaacgccgaatctttaaccgttttg
aaaaacttattgaaagactggtgggaagaggccttgaatgaagattttacggctgatctt
ttagtgaatgcattcataagctgggttcagaatccagaatcatgtttattcgacattctc
ctgaggtatcatgtgcacaatttgaccagaaagtcactgctgcaattactcaacgaattc
aatagcttggggtccacagtaatttttgcagatcgaaacaaactaatggtcaaaacgaat
aagtttgtacctgaaaactgttacgcttatagtgagtacatggtgaaggcggtgaaggtg
aacccattattcaagtacattgatctgaggattgaaaaatattgggatgtgctgatatgg
atggacaaatttaacttcggtggtttggcgtgttcaactatacaagacaaagatgaacag
gattatgatgcctattccgtatggcaaataaagaacacgctgccccccattttccaaaca
gagtttgatgactggatggctattattttggatagcatgacgaaaaccaaacgaacttac
tttgaaaagaacatgggtactcaaagggccacacagatcatacagacaaagaagtcatca
gatggcggtgatgaagaagtaaactcgttgagtaacttcactgaactgttcgccaaaccg
ctgataaaaagagtcaaaaaactatatcggaatcagcaggagtttattttggatcctcag
tacttggaggactataaatttccagagttacctgggttatatttgccacttaaaaacccc
ttattggaactggtcaaggacttatgtcaggtaatgtctctttccaagattacgttgttg
gaggtaagggccctgcggaaagagttattgaagctttttgaaattcgtgaatttgccaaa
gaagcagagttcagcaatccgtgtaagaacttgataataaacgaggttacctgtagatat
tgcttccacgcgacttccattgatttctgcaggatggattcatccggcgactttagttgc
atgaattgtcataaggactttgatagagacttgttacaagagtttttgattcaaaagtta
tgttctgagagtgacaattttgtctctcaggacttgcactgttccaaatgccacaagatc
aagatggattatatgagtacccattgtacctgctctggtaaatgggtaaactctgccaaa
acgctggatcttgaaaaccaagtggtaatttacagacaggtcgctgactatttcaaattt
gatctgttgaaagataccattcaagagctgcaccagcattaa

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