Huiozyma naganishii: KNAG_0F00540
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Entry
KNAG_0F00540 CDS
T08174
Symbol
KNAG0F00540
Name
(RefSeq) hypothetical protein
KO
K02324
DNA polymerase epsilon subunit 1 [EC:
2.7.7.7
]
Organism
kng
Huiozyma naganishii
Pathway
kng03030
DNA replication
kng03410
Base excision repair
kng03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
kng00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KNAG_0F00540 (KNAG0F00540)
03410 Base excision repair
KNAG_0F00540 (KNAG0F00540)
03420 Nucleotide excision repair
KNAG_0F00540 (KNAG0F00540)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
kng03032
]
KNAG_0F00540 (KNAG0F00540)
03400 DNA repair and recombination proteins [BR:
kng03400
]
KNAG_0F00540 (KNAG0F00540)
Enzymes [BR:
kng01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KNAG_0F00540 (KNAG0F00540)
DNA replication proteins [BR:
kng03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase epsilon complex
KNAG_0F00540 (KNAG0F00540)
DNA repair and recombination proteins [BR:
kng03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase epsilon complex
KNAG_0F00540 (KNAG0F00540)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1744
POL2_thumb
DNA_pol_B_exo1
zf-DPOE
DNA_pol_B
DNA_pol_B_exo2
RNase_H_2
Viral_DNA_bp
zf_DPOE_2
Motif
Other DBs
NCBI-GeneID:
34526438
NCBI-ProteinID:
XP_022464969
UniProt:
J7RME7
LinkDB
All DBs
Position
6:83727..90368
Genome browser
AA seq
2213 aa
AA seq
DB search
MSAYMGPRARKGASTARFVKGAQGTANGGGANPFAVVAQQLLQTQRVDEIDAVMGFERYR
PPQFSGGDASGQVPGRVGWLVNMHPVVVSLESVHGSSSGSGAGGIAGVDFYFLDEEGGGF
KSTLTYDPYFFVTVTDDRMLNDVEEYLKKLLEGTLKNIEALQKEDLSLDNHLIGLKKPLI
KLSFVNNNQLFEARRLLRPILQENSNTKTQRNIYRPHAVENTVGDAKRFIDEIREYDVPY
HVRVSIDRDVRVGKWYNVTDLGFLECPEKVAFADPVVLAFDIETTKPPLKFPDAAVDQIM
MISYMIDGDGYLITNREIISEDIEDFEYTPKPEFRGQFAIFNEQDELALLQRFFEHIRDV
RPTVISTFNGDFFDWPFVETRARIHGLDMFEEIGFAADSEGEYKSAYCCHMDCFRWVKRD
SYLPQGSQGLKAVTQAKLGYNPIELDPELMTPYAYTKPQQLSEYSVSDAVATYYLYMKYV
HPFIFSLCSIIPLNPDEVLRKGTGTLCEMLLMVQAYKNNILLPNKHTDPIERFYDGHLLE
SETYVGGHVESLEAGVFRSDLKNDFTIDPTAVDELLADLPATLKFCIEKENNCSLDKVTN
LEEVKEQITNSLLQLKENRKTHELPLIYHVDVASMYPNIMTTNRLQPDSIKTERDCASCD
FNRPGKTCARRLKWAWRGEFFPAKMDEYNMIKRALQNETFPNKNKFSQKPILTFDELSYA
DQVAHIKKRLSEYSRKVYHRVKVSEVVEREAIVCQRENPFYVNTVRSFRDRRYEFKGLAK
TWKGKASKIDPADKHEKDEATKMVVLYDSLQLAHKVILNSFYGYVMRKGSRWYSMEMAGI
TCLTGATIIQMARSLVERVGRPLELDTDGIWCILPKSFPDNYTFKLENGKKLYLSYPCSM
LNYRVHQQFTNDQYQELVDPEKLKYETHSDNSIFFEVDGPYRAMILPTSKEEGKGIKKRY
AVFNEDGSLAELKGFELKRRGELQLIKNFQSDIFKLFLEGDSLQNCYNAVATVANRWLDV
LDTEGKMLEDEDLIELICENRSMSKTLKEYEGQKSTSITTAKRLGDFLGEEMVKDKGLQC
KYIISSRPANAPVTERAIPVAIFSADIAIKRSFLRRWTADPSLDNFDIRTIIDWGYYKER
LGSTIQKIITIPAALQNVENPVPRVVHPDWLKKKINTMNDKFKQTSLNRFFTKTSDIPVA
GKIQDIEDILYKGTEEPRPKKLSGKVSRKNRLAKRKRDQKEVEDSLTLPKECPSMHEDYV
GWLKYQKIKWKIQARDRKRRTQLFGDNNRTVDRSALGNMVRKQAETYANATWEILQYRKT
NEPGVLEVHILINGKIQQLRFKIPKTVYVKLKTNVASLGPIQDCMVEKSNATLPNHPQIN
RYPSGSLFKLTLPELVYREELEKRSSVLNDDNVLGIFEGAVDITQHAVMELGSSVRFNSN
TLGSLGKGLQNGFDMKSLNMTDNERYMSRFKSDTAYLLHFTTNIGYEFFILFKSWNEEIE
IFTLKPSIQAQGITEQMITKIYSDLFEKRMDKLREFSRFIDFKETVAFNLHSFTDLNKLT
RHLTVSIGKMKEEKGQQFLMLLKSPSNKKLTSKIKNLRTLPVLELATTPLTLPQLNWQSN
LCSKIINQIFSCSSWVAHMVKVARYSNIPVCNLQLDNMGYVIDVLYARKLRHENIVLWWN
ENGPLPDLAGIEKEYDPNISGIMQELSFPDVNTPDIYDKTVLEIQIRNLTINTVLASTLI
NEAEGSDLTNVESSAMNSASSEKNSVFVEDAFNAESLTVLKNLLKDWWEEALNEDFTADL
LVNAFISWVQNPESCLFDILLRYHVHNLTRKSLLQLLNEFNSLGSTVIFADRNKLMVKTN
KFVPENCYAYSEYMVKAVKVNPLFKYIDLRIEKYWDVLIWMDKFNFGGLACSTIQDKDEQ
DYDAYSVWQIKNTLPPIFQTEFDDWMAIILDSMTKTKRTYFEKNMGTQRATQIIQTKKSS
DGGDEEVNSLSNFTELFAKPLIKRVKKLYRNQQEFILDPQYLEDYKFPELPGLYLPLKNP
LLELVKDLCQVMSLSKITLLEVRALRKELLKLFEIREFAKEAEFSNPCKNLIINEVTCRY
CFHATSIDFCRMDSSGDFSCMNCHKDFDRDLLQEFLIQKLCSESDNFVSQDLHCSKCHKI
KMDYMSTHCTCSGKWVNSAKTLDLENQVVIYRQVADYFKFDLLKDTIQELHQH
NT seq
6642 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcgtacatgggaccgagggcacgcaagggagcgtcgacagcgcgatttgtgaag
ggtgcgcaggggaccgctaatggcggtggcgcgaacccgttcgcggtcgtcgcgcagcag
ttgttgcagacgcagcgggtcgacgagatagacgccgtgatggggtttgaacggtacaga
ccgccgcagttcagtggcggggacgcctctgggcaggtgcccgggcgcgttggatggctg
gtgaacatgcaccccgtggtcgtgtcgctggagtccgttcacggttcctccagtggtagt
ggtgccggtggtatcgccggtgtggacttctactttctagatgaggaaggtggtgggttc
aagtccacgctcacttatgatccttacttctttgtgactgtgacggacgatcgaatgctc
aacgatgtagaagagtacctcaagaaattgctcgagggaacgctaaagaacattgaggcc
cttcaaaaggaggatctgtccctagacaaccatctgatagggttgaagaaaccgctcatc
aaattgtcgtttgtcaacaacaaccagctgttcgaggcaagaagactacttagacccatc
cttcaagagaactccaataccaagacacaacggaacatatacagaccccacgcagtggaa
aacacagtgggagatgctaaaagattcattgatgaaattagagaatacgacgtgccctac
cacgtaagagtgtccatcgacagggacgtccgtgttgggaaatggtacaacgtgacggat
ctcgggttcctcgagtgccctgagaaagtcgcgttcgcggacccagtggtccttgccttc
gatatcgagacaacgaagccaccgctcaagttcccagacgccgcagtggaccagatcatg
atgatctcgtacatgatcgacggagacgggtacctcatcactaacagggagatcatttca
gaggacattgaggatttcgagtatacgccgaaaccggagttccgcggccagttcgccatc
ttcaacgagcaggacgagctcgcgttgctccagcggttcttcgaacacatcagggacgtc
cgtccgacggtcatctcgactttcaacggtgacttcttcgattggcccttcgtcgagacc
agagcaaggatccacggactcgatatgttcgaagagatcgggtttgcggcagactcagag
ggggagtacaaatccgcatactgttgccacatggactgtttcaggtgggtcaagagggat
tcgtacctcccacaggggtcccaaggtcttaaagcggtcacgcaggcgaaattggggtac
aacccgatcgaactagacccagaactcatgacaccgtacgcttacacgaaaccacaacag
ctatcggagtactccgtttcggacgcagtagcaacgtactatctgtacatgaagtacgtc
cacccgtttatcttctccctgtgcagtatcattcctctaaacccagacgaagtgctcagg
aaggggacgggtacgctctgtgagatgctgctcatggtacaggcgtacaagaacaatatc
ctgctaccgaacaagcacacggacccgatagagaggttttacgatggacatttacttgaa
tcggagacatacgtcggagggcacgtcgagtccctagaggccggtgtcttcagaagcgat
ttaaagaacgatttcacaattgaccccacagcggtcgatgaactgctcgcggacttacca
gcgactctaaaattctgcattgagaaggagaacaactgctccctcgacaaagtgaccaac
ctcgaagaggtcaaagaacaaatcacaaacagcttgctgcaactcaaggaaaacaggaaa
actcacgaattgcctctcatctaccacgtcgacgtcgcatccatgtacccaaacatcatg
acgacaaacagattacaaccggacagtatcaaaacggagagggactgtgccagttgcgac
ttcaatagaccgggcaagacgtgtgcccgcagactgaagtgggcatggagaggcgagttc
tttccggccaagatggacgagtacaacatgatcaaaagagcgctgcagaacgagactttc
cccaacaagaataagttctcacagaagccgatcctgactttcgacgaactgagctacgcc
gaccaggtggcacacatcaaaaagagactcagtgagtactccaggaaagtctaccacaga
gtcaaagtgtccgaggtcgtcgagagagaagcgatcgtctgccaaagggaaaacccattt
tacgtcaacacggtgcgttcgttccgtgacagacggtacgaattcaagggactcgcgaaa
acgtggaaggggaaggcatctaagatagatcctgctgataaacacgaaaaggacgaggcg
accaaaatggttgtgttgtatgactccttgcaacttgcacacaaagtcatcttgaattcc
ttctacggttacgtcatgaggaaaggttctcgttggtattcgatggaaatggcagggata
acgtgtctgacgggtgctactatcatccaaatggcaagatcccttgtagagagagtcgga
agaccgttggagctcgatacagacggtatttggtgtattttgcccaaatctttcccggac
aattacactttcaagcttgaaaacggaaagaaattgtacctgtcgtacccgtgctccatg
ctgaattacagagtgcaccaacagtttaccaacgatcaataccaagaactggtagaccct
gagaagcttaagtacgagacacactctgacaactccattttttttgaagtggacgggcct
tacagggctatgattttgcccacctcaaaggaggaaggtaaaggtatcaaaaaaagatac
gccgtgttcaacgaggatgggtccctagcagagttgaagggttttgaactgaagagacgt
ggtgaattacagttgatcaaaaactttcaaagtgatatcttcaagttgttcttggagggg
gattccttgcaaaattgttataatgcggttgcaacggtggccaacagatggctcgacgtt
cttgatacggaggggaaaatgctggaggacgaagatttgattgaacttatttgcgagaat
agaagcatgtcgaagactttaaaggagtacgagggtcaaaaatcgacttctatcaccaca
gccaagcgtctcggtgacttcttaggtgaagaaatggtgaaggacaaaggtctacaatgt
aaatacattatcagtagcagaccggcaaatgcgccagtcacagaaagggccattcccgtt
gccattttctccgctgatatcgccatcaaacgatctttcctaagacgttggaccgctgac
ccatccctggataactttgacatccggacaattatagactggggatactacaaggaaaga
ctgggttccactatccaaaaaattattacaattcctgcagcgctacagaatgtcgagaac
ccagttccaagggttgtccatcctgattggttgaagaagaagatcaataccatgaacgac
aaattcaaacaaacctctctaaacagattcttcaccaaaactagcgacattccagtagca
ggcaaaatccaggatatcgaggacatactttataaaggtacggaagagccccggccaaaa
aaattgagtggtaaagtttccaggaaaaacagacttgcaaagaggaagcgtgatcaaaag
gaagttgaagactcattgacgcttccaaaagaatgcccatcgatgcatgaggattatgta
gggtggctaaaatatcagaaaattaagtggaaaattcaggcaagagacagaaagcgcaga
acccaactatttggtgataataatagaactgttgatagatcggcattgggtaatatggta
aggaagcaagcagaaacgtacgccaatgctacgtgggaaattctgcaatatagaaagaca
aacgaacccggggtattagaagttcatattctcatcaatggtaaaatccagcaattgcga
ttcaagatacccaagacagtctacgttaagctcaagacaaatgtggcatcacttggtcca
attcaagattgcatggtagaaaaatcgaacgccactcttccaaaccacccgcaaatcaat
cgctatccttctgggagtttgttcaaattaactctcccggaattagtttatcgtgaggag
ctcgagaaacgatcaagtgtgttaaacgatgataatgtacttggtatatttgagggagct
gtggatattactcaacatgcagttatggagttaggctcttctgtcaggttcaattcaaat
acacttggctcgcttgggaagggacttcagaacggttttgacatgaaaagtctaaacatg
accgataatgaacggtatatgagcagattcaaaagcgataccgcttacttactgcacttt
acaactaacattggatacgaatttttcattctatttaaatcgtggaatgaggaaattgaa
atattcaccctaaaaccgtcgatacaggcacaagggattactgaacagatgatcacaaag
atttactcagatttatttgagaagagaatggataaactaagagagttttcaagatttatc
gatttcaaagaaacggtggcatttaatctacacagtttcacagatctgaacaaattgacg
agacacttaactgtgtccattggtaagatgaaagaggaaaaaggccaacaattcttaatg
cttttgaagtctccttctaacaagaagttaactagcaaaataaaaaatctgcggacccta
ccagtgctcgagcttgctacaacaccactaacgctgcctcaactcaactggcaatccaat
ctttgttctaaaatcatcaaccaaatattttcatgcagctcatgggtggcccatatggtc
aaagttgctcgttatagcaatattccggtctgtaacctgcagctggataacatgggctat
gttatcgatgttttgtacgccagaaagctaagacacgaaaatatagtattgtggtggaat
gagaatggcccgcttccggatttggctggtattgaaaaggagtacgacccgaatatttca
ggaatcatgcaagagctttctttcccagatgtcaatacccctgacatttacgataaaact
gtgcttgaaattcagatccgtaatttgacgatcaataccgttctggcatccactttgatt
aatgaagctgaaggaagcgacctcacaaatgttgagtcgagcgctatgaactcagctagc
tctgagaagaactctgtttttgttgaagatgcttttaacgccgaatctttaaccgttttg
aaaaacttattgaaagactggtgggaagaggccttgaatgaagattttacggctgatctt
ttagtgaatgcattcataagctgggttcagaatccagaatcatgtttattcgacattctc
ctgaggtatcatgtgcacaatttgaccagaaagtcactgctgcaattactcaacgaattc
aatagcttggggtccacagtaatttttgcagatcgaaacaaactaatggtcaaaacgaat
aagtttgtacctgaaaactgttacgcttatagtgagtacatggtgaaggcggtgaaggtg
aacccattattcaagtacattgatctgaggattgaaaaatattgggatgtgctgatatgg
atggacaaatttaacttcggtggtttggcgtgttcaactatacaagacaaagatgaacag
gattatgatgcctattccgtatggcaaataaagaacacgctgccccccattttccaaaca
gagtttgatgactggatggctattattttggatagcatgacgaaaaccaaacgaacttac
tttgaaaagaacatgggtactcaaagggccacacagatcatacagacaaagaagtcatca
gatggcggtgatgaagaagtaaactcgttgagtaacttcactgaactgttcgccaaaccg
ctgataaaaagagtcaaaaaactatatcggaatcagcaggagtttattttggatcctcag
tacttggaggactataaatttccagagttacctgggttatatttgccacttaaaaacccc
ttattggaactggtcaaggacttatgtcaggtaatgtctctttccaagattacgttgttg
gaggtaagggccctgcggaaagagttattgaagctttttgaaattcgtgaatttgccaaa
gaagcagagttcagcaatccgtgtaagaacttgataataaacgaggttacctgtagatat
tgcttccacgcgacttccattgatttctgcaggatggattcatccggcgactttagttgc
atgaattgtcataaggactttgatagagacttgttacaagagtttttgattcaaaagtta
tgttctgagagtgacaattttgtctctcaggacttgcactgttccaaatgccacaagatc
aagatggattatatgagtacccattgtacctgctctggtaaatgggtaaactctgccaaa
acgctggatcttgaaaaccaagtggtaatttacagacaggtcgctgactatttcaaattt
gatctgttgaaagataccattcaagagctgcaccagcattaa
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integrated database retrieval system