KEGG   Huiozyma naganishii: KNAG_0G01610
Entry
KNAG_0G01610      CDS       T08174                                 
Symbol
KNAG0G01610
Name
(RefSeq) hypothetical protein
  KO
K12624  U6 snRNA-associated Sm-like protein LSm5
Organism
kng  Huiozyma naganishii
Pathway
kng03018  RNA degradation
kng03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:kng00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    KNAG_0G01610 (KNAG0G01610)
  09123 Folding, sorting and degradation
   03018 RNA degradation
    KNAG_0G01610 (KNAG0G01610)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:kng03019]
    KNAG_0G01610 (KNAG0G01610)
   03041 Spliceosome [BR:kng03041]
    KNAG_0G01610 (KNAG0G01610)
Messenger RNA biogenesis [BR:kng03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     KNAG_0G01610 (KNAG0G01610)
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     KNAG_0G01610 (KNAG0G01610)
Spliceosome [BR:kng03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    KNAG_0G01610 (KNAG0G01610)
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 34526943
NCBI-ProteinID: XP_022465465
UniProt: J7S7W8
LinkDB
Position
7:<358748..>359008
AA seq 86 aa
MSVPDILPLEVIDKTISQPVWIILQSNREFTGTLVGFDDFVNVIIEDAVEWTVTDGKSEK
IMEHHGRMLLSGNNIVMLVPGGKKDI
NT seq 261 nt   +upstreamnt  +downstreamnt
atgagcgtaccagacattctgccattggaggtgatagacaagactatcagccagccggtg
tggattattctgcagtccaacagggaattcacggggactttggtcggttttgacgatttt
gtcaacgtgatcattgaggatgccgtcgagtggacagtgacagacggtaagagcgagaag
atcatggagcatcacgggagaatgctgctgagtgggaacaacattgtcatgctggtcccc
ggcggcaagaaagatatataa

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